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MG962366.1__AVO25098.1__SEA_FINCH_170__00170

Bact-Vir

MG962366.1__AVO25098.1__SEA_FINCH_170__00170

Identity

Accession:
MG962366 ↗
Kingdom:
phage

Quality

75.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Finchvirus› Rhodococcus_phage_Finch

TaxID: 2094144

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-59
PDB
Domain cluster: representative
CATH (26)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3m1uA01 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.73 63.0 4.56e-01 100.0% 53.2%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.70 58.0 5.56e-01 91.2% 93.9%
1igqB00 2.30.30.150 Mainly Beta › Roll › SH3 type barrels. › KorB, C-terminal domain 0.69 50.0 5.05e-01 77.2% 86.0%
1wjrA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 56.0 4.34e-01 91.2% 81.1%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.69 57.0 5.56e-01 91.2% 98.4%
1wzoA01 2.30.30.370 Mainly Beta › Roll › SH3 type barrels. › FAH 0.68 46.0 5.11e-01 73.7% 100.0%
6s8zA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.67 55.0 5.38e-01 91.2% 100.0%
3udcA02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.65 52.0 5.48e-01 87.7% 100.0%
5ajiB02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.64 50.0 5.27e-01 84.2% 100.0%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.64 51.0 4.89e-01 91.2% 94.2%
2fvgA02 2.40.30.40 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 0.64 54.0 4.95e-01 96.5% 96.1%
4cp6A00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.63 43.0 2.57e-01 71.9% 13.1%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 54.0 5.15e-01 100.0% 97.1%
3kbgA03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.62 42.0 4.24e-01 70.2% 91.1%
7razA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.62 51.0 4.53e-01 94.7% 71.8%
2cw5A02 2.40.30.90 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like 0.60 51.0 4.45e-01 96.5% 87.6%
2l73A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.57 42.0 3.20e-01 78.9% 90.2%
1jqlA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.57 42.0 3.43e-01 82.5% 78.2%
3ge2A00 2.40.128.50 Mainly Beta › Beta Barrel › Lipocalin › 0.57 46.0 4.13e-01 96.5% 98.9%
3fg2P02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 39.0 3.12e-01 78.9% 95.2%
2ijd101 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.54 37.0 2.66e-01 71.9% 33.9%
3hurA01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.54 44.0 3.30e-01 96.5% 67.7%
4k7jA02 2.60.120.1360 Mainly Beta › Sandwich › Jelly Rolls › 0.53 45.0 3.63e-01 100.0% 84.6%
7nkdA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.53 42.0 3.89e-01 100.0% 67.5%
1yzbA01 3.90.70.40 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.53 42.0 3.49e-01 100.0% 61.3%
3ef6A02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 39.0 3.12e-01 82.5% 98.3%
ECOD (79)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5005813 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 58.0 6.19e-01 96.5% 94.0%
4990212 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 61.0 6.24e-01 87.7% 96.4%
4950396 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 60.0 6.18e-01 89.5% 90.9%
5044373 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 61.0 6.07e-01 91.2% 93.3%
5025079 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 64.0 6.51e-01 94.7% 100.0%
4369736 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.74 54.0 5.99e-01 86.0% 100.0%
4972485 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 58.0 5.92e-01 86.0% 98.2%
4966534 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 59.0 6.25e-01 89.5% 100.0%
4992872 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 61.0 6.22e-01 91.2% 100.0%
5017214 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 60.0 6.11e-01 89.5% 96.4%
3603357 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 61.0 6.21e-01 91.2% 100.0%
5033075 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 61.0 6.24e-01 91.2% 96.4%
4972823 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 58.0 6.12e-01 89.5% 100.0%
3466927 4.2.1.4 ↗ beta barrels › SH3 › SAND › SAND › TDBD 0.71 58.0 4.97e-01 89.5% 85.6%
5002449 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 59.0 6.00e-01 91.2% 94.5%
4348606 4.1.1.440 ↗ beta barrels › SH3 › SH3 › SH3 › PF27165 0.71 58.0 5.57e-01 89.5% 90.8%
5058671 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 58.0 5.97e-01 91.2% 96.4%
5040416 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 56.0 5.90e-01 86.0% 100.0%
4952887 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 58.0 5.93e-01 91.2% 94.5%
4946165 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 58.0 5.89e-01 91.2% 98.2%
4947995 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 57.0 5.84e-01 91.2% 96.4%
5036616 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.69 61.0 5.70e-01 98.2% 92.9%
5036647 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.69 59.0 5.56e-01 98.2% 91.4%
4031578 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 54.0 5.65e-01 91.2% 98.0%
5060760 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.68 58.0 5.61e-01 96.5% 98.5%
4309285 3844.2.1.2 ↗ a+b two layers › hydrogenase expression protein-like › MybT EspG5 chaperone › MybT EspG5 chaperone › DUF5081 0.68 49.0 3.44e-01 77.2% 40.5%
3961546 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.68 60.0 5.77e-01 98.2% 98.5%
4091216 3844.2.1.2 ↗ a+b two layers › hydrogenase expression protein-like › MybT EspG5 chaperone › MybT EspG5 chaperone › DUF5081 0.68 49.0 3.34e-01 77.2% 46.3%
4980648 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 58.0 5.45e-01 98.2% 92.9%
5063537 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.67 56.0 5.54e-01 96.5% 96.7%
5043091 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.66 56.0 5.33e-01 96.5% 89.7%
4990359 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.66 58.0 5.56e-01 100.0% 96.9%
4182977 4.1.1.297 ↗ beta barrels › SH3 › SH3 › SH3 › YajC 0.66 52.0 5.20e-01 93.0% 85.0%
5030430 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 57.0 5.50e-01 98.2% 95.4%
3947085 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.66 57.0 5.37e-01 98.2% 91.4%
4000645 10.32.1.1 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Laminin_B 0.66 57.0 4.03e-01 100.0% 47.2%
5034254 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.66 55.0 5.35e-01 98.2% 96.9%
3704356 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 53.0 4.80e-01 91.2% 72.5%
5019383 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.65 53.0 4.94e-01 93.0% 81.3%
4981300 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.65 55.0 5.31e-01 96.5% 96.9%
4967397 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.65 56.0 5.40e-01 96.5% 98.5%
4976896 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.65 55.0 4.70e-01 98.2% 76.8%
5017848 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.65 56.0 5.26e-01 98.2% 92.9%
5055961 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.65 55.0 4.99e-01 98.2% 91.3%
4938120 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.64 56.0 5.25e-01 98.2% 91.4%
4964421 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.64 53.0 5.19e-01 96.5% 95.4%
2697704 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.64 55.0 5.34e-01 100.0% 93.8%
4952854 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.64 55.0 5.27e-01 96.5% 95.4%
5029186 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.64 54.0 5.27e-01 98.2% 98.5%
3970459 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.64 54.0 5.21e-01 96.5% 93.8%
3839972 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.64 53.0 4.96e-01 98.2% 84.0%
4937586 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.64 53.0 5.10e-01 94.7% 92.3%
5075805 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 50.0 5.11e-01 87.7% 92.7%
5028692 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.63 53.0 5.13e-01 96.5% 95.4%
4932588 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.63 55.0 5.31e-01 98.2% 98.5%
4060455 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.63 54.0 5.12e-01 98.2% 91.4%
3973043 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 53.0 5.15e-01 96.5% 96.9%
5040230 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.63 52.0 5.03e-01 94.7% 93.8%
5058270 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.63 52.0 5.20e-01 96.5% 100.0%
5076401 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.63 53.0 5.00e-01 98.2% 90.0%
4963049 4.1.1.486 ↗ beta barrels › SH3 › SH3 › SH3 › DUF7098 0.63 54.0 4.84e-01 96.5% 95.0%
3834747 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.63 53.0 5.06e-01 100.0% 91.4%
4968248 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.63 54.0 5.08e-01 98.2% 91.4%
3839083 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.62 53.0 5.02e-01 100.0% 91.4%
4056487 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.62 52.0 4.97e-01 100.0% 91.4%
5029643 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.62 52.0 4.74e-01 100.0% 96.2%
4955296 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.61 52.0 4.99e-01 98.2% 96.9%
3964889 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.61 51.0 4.74e-01 100.0% 92.0%
3961013 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.61 50.0 4.72e-01 94.7% 81.4%
5064404 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.61 50.0 4.93e-01 100.0% 88.3%
4961138 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.60 49.0 4.58e-01 98.2% 96.0%
4959192 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.60 49.0 4.78e-01 98.2% 92.3%
5005032 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.59 48.0 4.62e-01 100.0% 94.3%
5025178 11.1.4.23 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CarboxypepD_reg 0.58 44.0 4.06e-01 100.0% 64.0%
4940501 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.57 47.0 4.55e-01 96.5% 92.3%
4938749 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.55 40.0 2.75e-01 80.7% 60.9%
5054668 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 36.0 3.76e-01 94.7% 100.0%
3971219 11.9.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › FAH › FAH › FAA_hydrolase 0.51 42.0 2.85e-01 100.0% 55.6%
4946779 2003.1.3.3 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Pyr_redox_2 0.50 40.0 2.50e-01 91.2% 52.8%