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MG969427.1__AVO22587.1__X__00019
Bact-VirMG969427.1__AVO22587.1__X__00019
Identity
- Accession:
- MG969427 ↗
- Kingdom:
- phage
Quality
91.3
mean pLDDT
Taxonomy
TaxID: 2099336
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-57
Domain cluster:
representative
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4dciA00 | 6.10.140.1110 | Special › Helix non-globular › Helix Hairpins › | 0.73 | 56.0 | 4.04e-01 | 81.8% | 32.0% |
| 1n5uA02 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.73 | 63.0 | 5.35e-01 | 96.4% | 95.6% |
| 1vf6C00 | 1.10.287.650 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › L27 domain | 0.71 | 48.0 | 4.97e-01 | 70.9% | 84.3% |
| 3r84B00 | 6.10.280.160 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Mediator of RNA polymerase II transcription subunit 22 | 0.70 | 48.0 | 4.33e-01 | 72.7% | 93.8% |
| 1zhcA00 | 6.10.280.50 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.68 | 56.0 | 5.16e-01 | 100.0% | 80.3% |
| 3eslA01 | 1.20.58.2070 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.67 | 48.0 | 4.41e-01 | 78.2% | 58.7% |
| 4w4kA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.66 | 48.0 | 4.34e-01 | 81.8% | 56.1% |
| 4hkaA02 | 1.10.287.3810 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.66 | 47.0 | 4.85e-01 | 80.0% | 88.2% |
| 3m1cB01 | 3.30.390.170 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.65 | 46.0 | 3.74e-01 | 76.4% | 51.4% |
| 1j8yF01 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.63 | 55.0 | 4.71e-01 | 96.4% | 95.3% |
| 2kp8A00 | 1.20.5.170 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.63 | 46.0 | 4.26e-01 | 80.0% | 73.6% |
| 4iloA00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.63 | 46.0 | 3.09e-01 | 81.8% | 64.4% |
| 3fppA03 | 6.10.140.1990 | Special › Helix non-globular › Helix Hairpins › | 0.63 | 46.0 | 4.04e-01 | 81.8% | 93.2% |
| 2q0oC00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.63 | 45.0 | 4.06e-01 | 81.8% | 59.3% |
| 5l3wA01 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.61 | 46.0 | 4.01e-01 | 81.8% | 54.8% |
| 7s0rB01 | 1.20.81.20 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › | 0.61 | 49.0 | 4.61e-01 | 100.0% | 72.4% |
| 3dd9D02 | 6.10.140.2060 | Special › Helix non-globular › Helix Hairpins › | 0.61 | 42.0 | 4.66e-01 | 80.0% | 100.0% |
| 1tjlA00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.61 | 44.0 | 3.39e-01 | 81.8% | 32.4% |
| 1eteA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.60 | 51.0 | 3.91e-01 | 98.2% | 85.8% |
| 3zheD01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.60 | 45.0 | 3.12e-01 | 83.6% | 38.0% |
| 2dsjA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.60 | 37.0 | 3.49e-01 | 80.0% | 52.2% |
| 1z8sA02 | 6.10.140.360 | Special › Helix non-globular › Helix Hairpins › | 0.59 | 41.0 | 4.46e-01 | 81.8% | 100.0% |
| 6epyA01 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.56 | 45.0 | 3.08e-01 | 100.0% | 96.1% |
| 3s6jE02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.56 | 38.0 | 3.54e-01 | 70.9% | 68.1% |
| 3layF00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.55 | 43.0 | 3.99e-01 | 96.4% | 93.6% |
| 3a06B03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.55 | 44.0 | 3.92e-01 | 100.0% | 61.4% |
| 2y1vA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 44.0 | 3.17e-01 | 100.0% | 47.6% |
| 2n00A00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.50 | 42.0 | 3.64e-01 | 100.0% | 81.1% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3372032 | 5028.1.1.0 ↗ | extended segments › Sec-beta subunit › Sec-beta subunit › Sec-beta subunit | 0.75 | 52.0 | 5.24e-01 | 72.7% | 100.0% |
| 3606138 | 6132.1.1.0 ↗ | alpha bundles › Nudix hydrolase N-terminal dimerization domain › Nudix hydrolase N-terminal dimerization domain › Nudix hydrolase N-terminal dimerization domain | 0.73 | 50.0 | 5.23e-01 | 70.9% | 86.0% |
| 3643372 | 3681.1.1.0 ↗ | a+b complex topology › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit | 0.72 | 58.0 | 5.49e-01 | 87.3% | 78.5% |
| 4397104 | 605.1.1.4 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA_3 | 0.72 | 54.0 | 4.89e-01 | 81.8% | 69.3% |
| 3692552 | 5071.3.1.0 ↗ | alpha bundles › cytochrome bc1 complex 11 kDa protein-like › DUF465 › DUF465 | 0.69 | 58.0 | 5.58e-01 | 100.0% | 86.2% |
| 3942099 | 605.1.1.209 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › AI-2E_transport | 0.68 | 49.0 | 4.06e-01 | 76.4% | 45.0% |
| 3976663 | 3812.1.1.1 ↗ | alpha bundles › Type III secretion protein YscE › Type III secretion protein YscE › Type III secretion protein YscE › T3SS_needle_E | 0.68 | 51.0 | 4.87e-01 | 81.8% | 83.1% |
| 5050301 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.67 | 56.0 | 4.86e-01 | 90.9% | 83.3% |
| 4517001 | 632.3.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Phosphoprotein XD domain › Phosphoprotein XD domain | 0.67 | 46.0 | 4.83e-01 | 83.6% | 78.0% |
| 4027010 | 509.1.1.0 ↗ | alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain | 0.67 | 54.0 | 4.04e-01 | 90.9% | 50.7% |
| 3539986 | 5058.1.1.90 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › TMEM169 | 0.67 | 52.0 | 4.73e-01 | 87.3% | 68.0% |
| 3569033 | 3538.1.1.8 ↗ | extended segments › MerF › MerF › MerF › PF28754 | 0.67 | 49.0 | 4.99e-01 | 81.8% | 90.9% |
| 3284055 | 628.1.1.1 ↗ | alpha bundles › Fatty acid responsive transcription factor FadR, C-terminal domain › Fatty acid responsive transcription factor FadR, C-terminal domain › Fatty acid responsive transcription factor FadR, C-terminal domain › FCD | 0.66 | 55.0 | 4.24e-01 | 100.0% | 41.4% |
| 3279069 | 4970.1.1.0 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I | 0.66 | 45.0 | 4.55e-01 | 72.7% | 92.7% |
| 3462586 | 4970.1.1.0 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I | 0.65 | 49.0 | 5.20e-01 | 92.7% | 100.0% |
| 3974197 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.65 | 47.0 | 4.31e-01 | 81.8% | 58.7% |
| 3467886 | 192.6.1.5 ↗ | alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain › RWP-RK | 0.64 | 52.0 | 4.36e-01 | 96.4% | 85.7% |
| 4937862 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.64 | 49.0 | 3.93e-01 | 81.8% | 71.8% |
| 5072986 | 10.28.1.1 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in Zinc finger protein ZPR1 › Jelly-roll domain in Zinc finger protein ZPR1 › jr-ZPR1 | 0.63 | 51.0 | 3.96e-01 | 92.7% | 65.4% |
| 3944446 | 5069.1.3.1 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › Sdh_cyt | 0.62 | 47.0 | 4.09e-01 | 81.8% | 58.8% |
| 5005286 | 304.48.1.3 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B | 0.62 | 50.0 | 3.25e-01 | 98.2% | 31.1% |
| 3457988 | 192.14.1.1 ↗ | alpha bundles › Long alpha-hairpin › Siah interacting protein N terminal domain-like › Siah interacting protein N terminal domain-like › Siah-Interact_N | 0.61 | 43.0 | 4.60e-01 | 80.0% | 95.6% |
| 3998578 | 142.1.1.41 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › RabGAP-TBC | 0.61 | 48.0 | 4.67e-01 | 98.2% | 78.5% |
| 4182426 | 192.6.1.2 ↗ | alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain › ATPD_C_fung | 0.61 | 41.0 | 4.29e-01 | 80.0% | 81.2% |
| 4160609 | 192.6.1.0 ↗ | alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain | 0.60 | 43.0 | 4.39e-01 | 81.8% | 88.0% |
| 3581869 | 192.14.1.0 ↗ | alpha bundles › Long alpha-hairpin › Siah interacting protein N terminal domain-like › Siah interacting protein N terminal domain-like | 0.59 | 42.0 | 4.38e-01 | 80.0% | 92.0% |
| 5027312 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.59 | 42.0 | 3.60e-01 | 81.8% | 54.4% |
| 3988791 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.59 | 44.0 | 4.22e-01 | 89.1% | 71.4% |
| 4803705 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.58 | 43.0 | 4.08e-01 | 80.0% | 69.7% |
| 3503536 | 3711.1.1.38 ↗ | alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein › Patched | 0.58 | 42.0 | 3.74e-01 | 81.8% | 51.1% |
| 3619577 | 192.5.1.0 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat | 0.58 | 42.0 | 3.71e-01 | 81.8% | 52.2% |
| 3677540 | 2004.1.1.184 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 | 0.58 | 44.0 | 2.80e-01 | 89.1% | 16.4% |
| 4590991 | 192.6.1.0 ↗ | alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain | 0.57 | 40.0 | 4.19e-01 | 80.0% | 89.6% |
| 3302917 | 2004.1.1.505 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11, AAA_30 | 0.54 | 44.0 | 2.82e-01 | 98.2% | 24.2% |
| 3224794 | 150.5.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like | 0.53 | 38.0 | 3.61e-01 | 83.6% | 62.7% |
| 4029754 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.52 | 44.0 | 3.93e-01 | 100.0% | 69.4% |