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MG973030.1__AVO22899.1__X__00059

Bact-Vir

MG973030.1__AVO22899.1__X__00059

Identity

Accession:
MG973030 ↗
Kingdom:
phage

Quality

81.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Ackermannviridae› Nezavisimistyvirus› Erwinia_phage_vB_EamM-Bue1

TaxID: 2099338

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-52
PDB
Domain cluster: representative
CATH (28)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3o2pE00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 67.0 5.64e-01 100.0% 57.0%
2p5kA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 63.0 5.84e-01 100.0% 73.0%
3lapA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 62.0 5.62e-01 100.0% 67.6%
2qkmB01 1.10.10.1050 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Dcp2, box A domain 0.73 61.0 4.94e-01 100.0% 68.6%
3zhiA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.71 56.0 5.00e-01 89.8% 61.6%
2h92A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.71 55.0 3.66e-01 89.8% 78.2%
1u84A00 1.10.340.20 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Apc36109-like domain 0.69 59.0 5.09e-01 100.0% 87.7%
6cc0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 51.0 4.60e-01 100.0% 55.7%
4s3mB02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.68 56.0 4.55e-01 100.0% 58.5%
1bccA02 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.68 57.0 3.86e-01 100.0% 69.1%
2ivxB01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.66 55.0 4.09e-01 100.0% 42.9%
2llkA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.66 48.0 5.08e-01 100.0% 97.6%
3iuoA00 1.10.10.1390 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › ATP-dependent DNA helicase RecQ 0.66 48.0 3.82e-01 100.0% 36.7%
2ktmA00 1.10.790.10 Mainly Alpha › Orthogonal Bundle › Major Prion Protein › Prion/Doppel protein, beta-ribbon domain 0.63 43.0 4.00e-01 73.5% 89.7%
16vpA00 1.10.1290.10 Mainly Alpha › Orthogonal Bundle › Conserved core of transcriptional regulatory protein vp16 › Alpha trans-inducing (Alpha-TIF) 0.63 44.0 2.74e-01 77.6% 51.4%
6ui4A02 1.20.58.530 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.62 48.0 3.64e-01 100.0% 42.6%
2jucA00 1.10.10.440 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain 0.62 50.0 4.92e-01 100.0% 87.3%
1y56A04 1.10.10.1100 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › BFD-like [2Fe-2S]-binding domain 0.61 51.0 4.54e-01 100.0% 75.3%
2p4dA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.61 49.0 3.52e-01 98.0% 30.1%
1yozA00 1.10.3200.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af0941 › AF0941-like 0.60 49.0 3.96e-01 100.0% 66.4%
1g2rA00 3.30.1230.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Cytosolic Protein; Chain: A; › YlxR-like 0.59 51.0 4.16e-01 100.0% 67.0%
3eoqB02 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.58 47.0 3.36e-01 100.0% 78.1%
4dbgB01 6.10.140.1100 Special › Helix non-globular › Helix Hairpins › 0.58 42.0 4.31e-01 89.8% 85.1%
6jrpA01 1.10.30.10 Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain 0.57 38.0 3.66e-01 71.4% 57.4%
1cukA02 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.57 46.0 4.14e-01 100.0% 82.9%
2w02B01 1.10.150.640 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › AcsD, thumb domain, helical bundle 0.57 45.0 4.03e-01 91.8% 70.3%
3s4lA00 1.10.3210.30 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › 0.53 44.0 3.03e-01 100.0% 42.6%
1dj8A00 1.10.890.10 Mainly Alpha › Orthogonal Bundle › 10k-s Protein, Hypothetical Protein A; Chain A › HNS-dependent expression A 0.53 40.0 3.68e-01 95.9% 72.2%
ECOD (54)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3400463 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.87 79.0 6.24e-01 100.0% 69.5%
4999248 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.86 77.0 6.61e-01 100.0% 66.7%
3189296 101.1.2.68 ↗ alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 0.84 75.0 5.09e-01 100.0% 39.6%
4929122 7000.1.1.0 ↗ alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS 0.82 73.0 6.61e-01 100.0% 76.9%
3286882 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.81 71.0 6.50e-01 100.0% 76.9%
4960288 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.81 71.0 4.79e-01 100.0% 28.0%
3657248 101.1.2.394 ↗ alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 0.81 71.0 5.51e-01 100.0% 47.6%
4933155 198.1.1.27 ↗ alpha arrays › Saposin-like › Saposin-like › Saposin-like › PF27234 0.78 66.0 5.60e-01 100.0% 62.4%
3994728 7094.1.1.3 ↗ alpha bundles › Paddle domain of mitochondrial dynamin › Paddle domain of mitochondrial dynamin › Paddle domain of mitochondrial dynamin › OPA1_C 0.77 65.0 4.78e-01 100.0% 37.9%
4279089 7094.1.1.3 ↗ alpha bundles › Paddle domain of mitochondrial dynamin › Paddle domain of mitochondrial dynamin › Paddle domain of mitochondrial dynamin › OPA1_C 0.76 64.0 4.93e-01 100.0% 44.2%
4955688 2.21.1.5 ↗ beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) › PF27234 0.76 65.0 4.54e-01 100.0% 33.3%
5009771 2.21.1.5 ↗ beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) › PF27234 0.76 65.0 4.51e-01 100.0% 32.4%
5045223 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.76 67.0 5.47e-01 100.0% 54.4%
3321950 101.1.1.67 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_6 0.75 62.0 6.20e-01 95.9% 94.0%
4993593 198.1.1.27 ↗ alpha arrays › Saposin-like › Saposin-like › Saposin-like › PF27234 0.75 64.0 5.51e-01 100.0% 66.3%
3663044 101.1.1.67 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_6 0.75 62.0 5.47e-01 95.9% 62.7%
4932863 101.1.2.947 ↗ alpha arrays › HTH › HTH › winged helix domain › PF27234 0.74 62.0 5.41e-01 100.0% 66.3%
4934193 2.21.1.5 ↗ beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) › PF27234 0.74 61.0 4.40e-01 100.0% 33.1%
4940562 179.1.1.0 ↗ alpha bundles › CO dehydrogenase ISP C-domain like › CO dehydrogenase ISP C-domain like › CO dehydrogenase ISP C-domain like 0.74 59.0 5.62e-01 93.9% 85.0%
4934319 101.1.2.947 ↗ alpha arrays › HTH › HTH › winged helix domain › PF27234 0.74 60.0 5.55e-01 91.8% 76.2%
5053839 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.74 62.0 5.51e-01 100.0% 81.3%
5002999 101.11.1.0 ↗ alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 0.73 62.0 5.40e-01 100.0% 73.8%
4436943 101.11.1.1 ↗ alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase 0.73 61.0 5.35e-01 100.0% 78.8%
4994506 8001.1.1.3 ↗ alpha arrays › N-terminal domain of large tumor antigen › N-terminal domain of large tumor antigen › N-terminal domain of large tumor antigen › PF27234 0.73 60.0 4.99e-01 98.0% 83.2%
4934293 4993.1.1.0 ↗ extended segments › Glu-tRNAGln amidotransferase C subunit › Glu-tRNAGln amidotransferase C subunit › Glu-tRNAGln amidotransferase C subunit 0.73 61.0 5.32e-01 100.0% 65.0%
4963293 101.1.2.921 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF7109 0.73 61.0 5.11e-01 100.0% 55.6%
4571183 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.72 62.0 4.88e-01 100.0% 81.9%
3178452 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.71 61.0 5.62e-01 100.0% 75.4%
3568354 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.71 61.0 5.16e-01 100.0% 65.9%
5003639 2.21.1.0 ↗ beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) 0.71 58.0 4.25e-01 100.0% 34.2%
3535212 101.1.1.65 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_4 0.71 60.0 5.02e-01 100.0% 62.2%
3984597 101.1.2.488 ↗ alpha arrays › HTH › HTH › winged helix domain › DDE_Tnp_IS66 0.70 60.0 4.97e-01 100.0% 73.3%
1823203 101.32.1.2 ↗ alpha arrays › HTH › bacterioferritin-associated ferredoxin › bacterioferritin-associated ferredoxin › SO_alpha_A3 0.69 60.0 5.77e-01 100.0% 100.0%
3839204 2.21.1.3 ↗ beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) › HTH_OrfB_IS605 0.69 56.0 3.92e-01 100.0% 35.0%
4944988 2006.1.1.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.68 59.0 3.80e-01 100.0% 29.6%
3681054 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.67 52.0 5.10e-01 100.0% 83.6%
3449701 101.1.1.65 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_4 0.67 55.0 4.30e-01 100.0% 45.8%
3620303 101.1.1.66 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_5 0.67 56.0 5.12e-01 100.0% 97.1%
3891759 101.1.1.65 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_4 0.66 54.0 4.52e-01 100.0% 58.9%
3353701 101.1.1.65 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_4 0.65 53.0 4.40e-01 100.0% 55.0%
4096065 3239.1.1.1 ↗ alpha complex topology › Cas1 › Cas1 › Cas1 › Cas_Cas1 0.64 45.0 2.76e-01 75.5% 86.5%
3348391 101.1.1.65 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_4 0.64 51.0 4.28e-01 100.0% 54.0%
3211345 101.1.2.558 ↗ alpha arrays › HTH › HTH › winged helix domain › CCD_aECM 0.64 55.0 5.17e-01 100.0% 88.3%
5072566 604.4.1.0 ↗ alpha bundles › Spectrin repeat-like › Alpha-hemoglobin stabilizing protein AHSP › Alpha-hemoglobin stabilizing protein AHSP 0.64 49.0 4.56e-01 93.9% 85.7%
3303808 605.8.1.4 ↗ alpha duplicates or obligate multimers › ROP-like › BAS1536-like › BAS1536-like › Ovate 0.62 49.0 4.86e-01 100.0% 94.5%
4990693 2.21.1.5 ↗ beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) › PF27234 0.62 50.0 3.55e-01 100.0% 28.0%
4000036 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.61 50.0 3.78e-01 98.0% 51.1%
3326709 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.59 44.0 2.99e-01 83.7% 21.5%
3929347 7579.1.1.70 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › DUF1057 0.59 49.0 3.01e-01 95.9% 47.8%
3510680 192.15.1.0 ↗ alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains 0.58 42.0 3.84e-01 81.6% 62.9%
5078018 2006.1.1.18 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.57 47.0 3.13e-01 100.0% 30.9%
3963969 2004.1.1.314 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Z1 0.56 44.0 3.01e-01 100.0% 36.5%
3931563 101.35.1.0 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX 0.55 43.0 4.22e-01 100.0% 96.7%
5042877 103.5.1.0 ↗ alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like 0.54 37.0 3.72e-01 73.5% 70.0%