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MG983840.1__AVQ10068.1__PSH1131_063__00063
Bact-VirMG983840.1__AVQ10068.1__PSH1131_063__00063
Identity
- Accession:
- MG983840 ↗
- Kingdom:
- phage
Quality
52.9
mean pLDDT
Taxonomy
TaxID: 2108117
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-177
Domain cluster:
rep: CG10_big_fil_rev_8_21_14_0-10_scaffold_17_prodigal-single.1__X__X__00080__D4-138
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01743.27 best | PolyA_pol | 24.0 | 5.90e-05 | 64.8% | 66.7% |
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3aqlA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.78 | 58.0 | 6.51e-01 | 100.0% | 96.4% |
| 3h37A01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.76 | 59.0 | 6.48e-01 | 100.0% | 97.9% |
| 1ou5A01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.73 | 55.0 | 6.14e-01 | 99.4% | 97.9% |
| 4p4mA02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.72 | 47.0 | 5.66e-01 | 75.0% | 99.1% |
| 1vj7B02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.71 | 44.0 | 5.27e-01 | 76.7% | 90.8% |
| 3wfoA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.67 | 55.0 | 5.85e-01 | 100.0% | 98.1% |
| 7qprA02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.65 | 45.0 | 5.05e-01 | 79.5% | 90.4% |
| 2e7gA01 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.63 | 36.0 | 4.54e-01 | 77.3% | 92.5% |
| 5o5jC01 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.62 | 33.0 | 4.42e-01 | 83.0% | 100.0% |
| 1josA00 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.60 | 34.0 | 4.32e-01 | 76.7% | 95.0% |
| 2bjoA02 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.60 | 33.0 | 4.35e-01 | 75.0% | 100.0% |
| 2ql8A00 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.58 | 36.0 | 3.98e-01 | 79.5% | 77.1% |
| 1lqlA02 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.57 | 34.0 | 4.24e-01 | 76.7% | 98.1% |
| 7x4pA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.57 | 48.0 | 5.06e-01 | 89.2% | 100.0% |
| 3c6vA00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.53 | 32.0 | 3.46e-01 | 75.0% | 69.9% |
| 4l4qA02 | 3.30.300.340 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › S-adenosylmethionine synthetase, N-terminal domain | 0.51 | 34.0 | 3.92e-01 | 90.3% | 92.1% |
| 1whnA01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.51 | 28.0 | 3.59e-01 | 84.7% | 92.1% |
ECOD (50)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4146108 | 316.1.1.1 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PolyA_pol | 0.79 | 49.0 | 5.96e-01 | 90.3% | 93.9% |
| 3268750 | 316.1.1.56 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PF26128 | 0.74 | 58.0 | 5.91e-01 | 96.6% | 82.9% |
| 3387559 | 316.1.1.1 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PolyA_pol | 0.73 | 57.0 | 6.29e-01 | 98.9% | 97.9% |
| 3839787 | 316.1.1.1 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PolyA_pol | 0.72 | 56.0 | 6.13e-01 | 95.5% | 96.6% |
| 3599086 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.71 | 63.0 | 6.52e-01 | 94.3% | 98.8% |
| 3950526 | 316.1.1.1 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PolyA_pol | 0.69 | 58.0 | 6.11e-01 | 97.7% | 96.2% |
| 3338562 | 316.1.1.1 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PolyA_pol | 0.69 | 59.0 | 5.80e-01 | 100.0% | 84.9% |
| 4379266 | 316.1.1.1 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PolyA_pol | 0.69 | 58.0 | 5.92e-01 | 100.0% | 91.8% |
| 3936702 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.68 | 47.0 | 5.04e-01 | 77.3% | 82.0% |
| 3947616 | 316.1.1.1 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PolyA_pol | 0.68 | 58.0 | 6.02e-01 | 100.0% | 95.8% |
| 4436276 | 316.1.1.12 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Adenyl_transf | 0.68 | 51.0 | 5.68e-01 | 91.5% | 98.6% |
| 3203362 | 316.1.1.1 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PolyA_pol | 0.67 | 60.0 | 5.86e-01 | 93.8% | 98.4% |
| 3709581 | 316.1.1.36 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central | 0.67 | 51.0 | 5.08e-01 | 92.6% | 76.7% |
| 4972928 | 316.1.1.27 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta | 0.66 | 41.0 | 4.82e-01 | 86.4% | 89.2% |
| 4021217 | 316.1.1.1 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PolyA_pol | 0.66 | 59.0 | 5.93e-01 | 93.8% | 98.3% |
| 5049008 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.65 | 38.0 | 4.68e-01 | 84.7% | 90.9% |
| 5076994 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.64 | 39.0 | 4.84e-01 | 85.2% | 100.0% |
| 3610425 | 316.1.1.23 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DNA_pol_B_thumb | 0.64 | 55.0 | 5.07e-01 | 91.5% | 86.8% |
| 4967528 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.64 | 41.0 | 4.72e-01 | 88.6% | 88.8% |
| 3632181 | 316.1.1.56 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PF26128 | 0.63 | 59.0 | 5.83e-01 | 100.0% | 96.2% |
| 5071890 | 316.1.1.27 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta | 0.63 | 45.0 | 4.98e-01 | 94.3% | 91.4% |
| 4106843 | 316.1.1.43 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DUF294 | 0.62 | 43.0 | 4.68e-01 | 92.6% | 83.3% |
| 5054501 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.61 | 43.0 | 4.50e-01 | 93.2% | 79.4% |
| 3212735 | 316.1.1.36 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central | 0.60 | 43.0 | 4.53e-01 | 77.3% | 80.6% |
| 5037443 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.60 | 40.0 | 4.78e-01 | 94.3% | 100.0% |
| 3176440 | 327.7.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like | 0.60 | 34.0 | 4.25e-01 | 80.1% | 93.3% |
| 3171583 | 327.7.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like | 0.59 | 33.0 | 4.19e-01 | 75.6% | 91.4% |
| 4938200 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.59 | 45.0 | 4.68e-01 | 93.8% | 86.9% |
| 5051070 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.59 | 46.0 | 4.83e-01 | 95.5% | 92.3% |
| 4932807 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.59 | 46.0 | 4.83e-01 | 91.5% | 92.3% |
| 5044699 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.58 | 42.0 | 4.67e-01 | 90.9% | 96.3% |
| 5060300 | 316.1.1.18 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › AbiEii | 0.57 | 48.0 | 4.09e-01 | 92.0% | 92.0% |
| 5058509 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.57 | 41.0 | 4.51e-01 | 90.9% | 91.0% |
| 5073006 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.57 | 45.0 | 4.69e-01 | 97.7% | 91.9% |
| 5079507 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.56 | 42.0 | 4.63e-01 | 93.2% | 96.4% |
| 5075682 | 316.1.1.18 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › AbiEii | 0.56 | 48.0 | 4.06e-01 | 92.6% | 69.8% |
| 5031567 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.56 | 40.0 | 4.51e-01 | 93.2% | 96.3% |
| 5051482 | 316.1.1.27 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta | 0.56 | 43.0 | 4.66e-01 | 95.5% | 97.2% |
| 5044368 | 327.17.1.9 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › S-adenosylmethionine synthetase › S-adenosylmethionine synthetase › OsmC | 0.55 | 35.0 | 3.84e-01 | 79.5% | 77.1% |
| 3701795 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.55 | 38.0 | 4.31e-01 | 92.6% | 95.3% |
| 4996356 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.55 | 36.0 | 4.00e-01 | 79.0% | 82.9% |
| 4968136 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.54 | 43.0 | 4.52e-01 | 90.9% | 93.1% |
| 4977056 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.54 | 46.0 | 4.80e-01 | 92.0% | 98.2% |
| 3386923 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.54 | 39.0 | 4.12e-01 | 92.6% | 82.5% |
| 3958895 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.54 | 34.0 | 4.16e-01 | 83.0% | 100.0% |
| 5073398 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.54 | 42.0 | 4.56e-01 | 95.5% | 98.0% |
| 5031280 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.53 | 43.0 | 4.59e-01 | 95.5% | 98.7% |
| 5048935 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.52 | 44.0 | 4.53e-01 | 92.0% | 98.2% |
| 5044343 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.51 | 30.0 | 3.37e-01 | 72.2% | 74.1% |
| 4453434 | 316.1.1.9 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › GlnE | 0.50 | 45.0 | 3.76e-01 | 97.2% | 72.3% |
D2
high
residues 184-258