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MG983840.1__AVQ10076.1__PSH1131_071__00071

Bact-Vir

MG983840.1__AVQ10076.1__PSH1131_071__00071

Identity

Accession:
MG983840 ↗
Kingdom:
phage

Quality

77.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Mtkvariviridae› Kuravirus› Escherichia_phage_myPSH1131

TaxID: 2108117

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-81
PDB
Domain cluster: representative
CATH (28)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3jb9F00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.65 49.0 4.71e-01 81.7% 86.6%
3h41A03 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.65 50.0 4.20e-01 85.9% 54.8%
3npfA03 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.61 51.0 4.00e-01 95.8% 57.1%
1u5dA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 43.0 3.76e-01 74.6% 79.6%
2evrA02 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.60 50.0 4.02e-01 94.4% 54.1%
1ntyA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 40.0 3.43e-01 70.4% 75.0%
2k5iA02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.59 51.0 4.99e-01 98.6% 91.0%
3urgA02 2.30.30.530 Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain 0.58 47.0 5.00e-01 88.7% 100.0%
2x8fA02 2.40.128.10 Mainly Beta › Beta Barrel › Lipocalin › 0.58 42.0 3.83e-01 76.1% 98.9%
3rbyA01 2.40.128.320 Mainly Beta › Beta Barrel › Lipocalin › Protein HRI1, N-terminal domain 0.57 41.0 3.36e-01 78.9% 92.0%
4bi3A01 3.90.1720.80 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › 0.57 45.0 4.18e-01 100.0% 68.1%
2k2jA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 38.0 3.32e-01 70.4% 83.8%
4qqgG00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 49.0 4.95e-01 100.0% 100.0%
2jwpA00 2.60.120.430 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin 0.56 44.0 3.38e-01 87.3% 97.1%
6ijfC01 3.90.1720.80 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › 0.56 45.0 4.20e-01 100.0% 71.0%
1e2tA03 2.40.128.150 Mainly Beta › Beta Barrel › Lipocalin › Cysteine proteinases 0.55 41.0 3.55e-01 80.3% 86.3%
2rovA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 38.0 3.27e-01 70.4% 89.7%
3pe0A03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 45.0 4.70e-01 97.2% 100.0%
3isrA01 3.10.620.30 Alpha Beta › Roll › C8orf32 fold › 0.55 42.0 3.13e-01 83.1% 85.9%
4g29A00 3.10.670.10 Alpha Beta › Roll › Secreted effector protein ssei fold › Secreted effector protein ssei. 0.55 39.0 3.05e-01 77.5% 48.8%
3h96C00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.54 37.0 3.05e-01 71.8% 46.4%
1wthA01 2.40.50.260 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding protein domain 0.53 36.0 3.08e-01 70.4% 100.0%
1nezH00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 45.0 3.84e-01 100.0% 85.8%
3cxeC01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 40.0 3.71e-01 88.7% 87.8%
4oq8A00 2.60.120.220 Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain 0.51 38.0 3.15e-01 83.1% 85.4%
2xnjA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.51 39.0 3.54e-01 85.9% 100.0%
4epsA01 2.60.40.2620 Mainly Beta › Sandwich › Immunoglobulin-like › Fimbrillin-like 0.51 39.0 3.25e-01 83.1% 58.6%
3f1sB03 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.50 39.0 3.36e-01 84.5% 65.2%
ECOD (25)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3269834 220.1.1.95 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › VID27_PH 0.67 45.0 3.81e-01 70.4% 72.0%
4940673 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 49.0 5.22e-01 80.3% 98.3%
3228450 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.63 43.0 3.64e-01 70.4% 77.5%
3572393 4.1.1.99 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_10 0.63 49.0 5.01e-01 85.9% 97.1%
3523918 4.1.1.99 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_10 0.62 49.0 5.11e-01 85.9% 100.0%
3707284 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 43.0 3.71e-01 74.6% 72.5%
3171221 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.61 41.0 3.36e-01 70.4% 75.0%
4001211 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 41.0 4.04e-01 70.4% 75.6%
3372155 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.61 41.0 3.46e-01 70.4% 78.4%
3699577 220.1.1.236 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_27 0.61 42.0 3.71e-01 73.2% 77.3%
5042797 1.1.8.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.60 43.0 4.57e-01 74.6% 96.7%
3057477 220.1.1.146 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_NDK7_N 0.60 42.0 3.91e-01 74.6% 79.1%
3254760 220.1.1.29 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_3 0.59 41.0 3.49e-01 73.2% 67.2%
3502336 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 45.0 4.10e-01 85.9% 89.0%
3869553 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.58 41.0 3.37e-01 74.6% 69.6%
3250687 6.1.1.0 ↗ beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil 0.58 44.0 3.53e-01 83.1% 100.0%
5008468 219.1.1.13 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.58 43.0 3.33e-01 80.3% 88.1%
3225056 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 40.0 3.52e-01 73.2% 84.5%
3938546 220.4.1.0 ↗ beta barrels › PH domain-like › second barrel domain in viral glycoproteins › second barrel domain in viral glycoproteins 0.56 45.0 4.36e-01 88.7% 98.8%
1320680 4.1.1.115 ↗ beta barrels › SH3 › SH3 › SH3 › LytB_SH3 0.56 45.0 4.70e-01 88.7% 100.0%
3172880 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.55 43.0 3.04e-01 84.5% 54.9%
4933094 4294.1.1.1 ↗ few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like › Rieske 0.54 37.0 3.16e-01 73.2% 88.3%
3438163 4135.1.1.1 ↗ beta duplicates or obligate multimers › MAL13P1.257-like › MAL13P1.257-like › MAL13P1.257-like › CXXC_Zn-b_euk 0.53 45.0 3.53e-01 98.6% 86.1%
3620924 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.53 40.0 3.85e-01 81.7% 97.6%
3589894 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.51 36.0 2.94e-01 80.3% 60.6%