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MH019215.1__AVP41361.1__SEA_YARA_27__00027

Bact-Vir

MH019215.1__AVP41361.1__SEA_YARA_27__00027

Identity

Accession:
MH019215 ↗
Kingdom:
phage

Quality

71.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Streptomyces_phage_Yara

TaxID: 2126736

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-140
PDB
Domain cluster: rep: MH047631.1__AVR56904.1__PBI_TRISCUIT_31__00031__D4-134
D2 medium residues 345-418
PDB
D3 medium residues 468-517
PDB
Domain cluster: representative
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3464866 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.53 42.0 3.11e-01 94.0% 80.0%
3786972 11.1.1.470 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Psg1 0.53 35.0 2.59e-01 70.0% 49.1%
3525026 323.1.1.3 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.51 38.0 2.42e-01 92.0% 48.6%
D4 medium residues 548-608_658-721
PDB
Domain cluster: rep: LacPavin_0818_WC45_scaffold_160996_curated_closed_complete_prodigal-single.1__X__X__00808__D1309-1457
D5 medium residues 857-992
PDB
Domain cluster: rep: MZ333132.1__QXG07653.1__X__00025__D415-539
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03009.24 best GDPD 84.0 2.60e-23 97.1% 46.3%
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1o1zA00 3.20.20.190 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase 0.95 79.0 6.41e-01 100.0% 51.3%
1zccA00 3.20.20.190 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase 0.92 84.0 6.71e-01 100.0% 53.3%
1ydyA00 3.20.20.190 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase 0.90 86.0 6.25e-01 100.0% 53.0%
7ympE01 3.20.20.190 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase 0.90 87.0 6.57e-01 100.0% 59.1%
2oogD00 3.20.20.190 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase 0.89 86.0 6.62e-01 100.0% 55.6%
3mz2A00 3.20.20.190 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase 0.89 80.0 6.09e-01 100.0% 44.9%
3ch0A00 3.20.20.190 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase 0.89 85.0 6.54e-01 100.0% 59.6%
3i10A00 3.20.20.190 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase 0.89 79.0 6.08e-01 100.0% 45.7%
3l12B00 3.20.20.190 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase 0.88 85.0 6.35e-01 100.0% 55.3%
2pz0B00 3.20.20.190 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase 0.88 84.0 6.70e-01 100.0% 55.6%
2otdA01 3.20.20.190 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase 0.87 84.0 6.85e-01 100.0% 59.6%
3qvqA00 3.20.20.190 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase 0.87 83.0 6.56e-01 100.0% 54.2%
1vd6A00 3.20.20.190 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase 0.86 72.0 5.95e-01 100.0% 53.7%
3ks6A00 3.20.20.190 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase 0.86 80.0 6.33e-01 100.0% 52.8%
3no3A00 3.20.20.190 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase 0.81 73.0 5.91e-01 100.0% 53.8%
2o55A00 3.20.20.190 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase 0.81 77.0 6.10e-01 100.0% 53.9%
2gpyB00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.68 37.0 3.32e-01 92.6% 37.0%
1djxA02 3.20.20.190 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase 0.62 56.0 4.28e-01 100.0% 45.0%
1j6uA03 3.90.190.20 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain 0.52 36.0 3.72e-01 99.3% 72.7%
ECOD (96)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4960417 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.95 83.0 6.70e-01 100.0% 53.0%
5051726 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.95 83.0 6.55e-01 100.0% 50.2%
2831694 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.94 82.0 6.39e-01 100.0% 47.8%
5028823 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.94 83.0 6.83e-01 100.0% 55.9%
5049645 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.93 82.0 6.50e-01 100.0% 50.2%
4990366 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.93 80.0 6.48e-01 100.0% 52.2%
None — 0.93 82.0 6.72e-01 100.0% 55.9%
8791 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.92 84.0 6.71e-01 100.0% 53.3%
5078364 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.92 74.0 6.03e-01 100.0% 49.1%
5036821 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.91 83.0 6.66e-01 100.0% 53.8%
3959945 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.91 79.0 6.20e-01 100.0% 48.2%
4978539 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.91 80.0 6.48e-01 100.0% 53.9%
4128925 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.90 87.0 6.93e-01 100.0% 56.1%
3432192 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.90 87.0 6.18e-01 100.0% 51.6%
None — 0.90 78.0 6.18e-01 100.0% 48.8%
3459395 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.90 87.0 6.23e-01 100.0% 54.6%
3644832 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.90 86.0 5.25e-01 100.0% 24.9%
3596244 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.90 81.0 6.11e-01 100.0% 44.6%
3945611 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.90 86.0 6.19e-01 100.0% 51.2%
3967447 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.90 86.0 6.21e-01 100.0% 52.6%
5063846 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.90 86.0 6.48e-01 100.0% 58.6%
5025575 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.90 82.0 6.61e-01 100.0% 55.7%
1349051 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.90 86.0 6.54e-01 100.0% 52.5%
4961660 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.90 76.0 6.31e-01 100.0% 54.5%
3973182 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.90 86.0 6.10e-01 100.0% 48.3%
3165764 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.89 86.0 6.20e-01 100.0% 52.1%
3015492 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.89 87.0 6.37e-01 100.0% 53.9%
4034085 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.89 86.0 6.61e-01 100.0% 53.0%
3829659 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.89 86.0 6.05e-01 100.0% 47.8%
3263137 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.89 86.0 6.44e-01 100.0% 49.7%
3526555 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.89 85.0 6.43e-01 100.0% 47.4%
4996562 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.89 85.0 6.67e-01 100.0% 53.6%
None — 0.89 84.0 6.68e-01 100.0% 54.7%
3214410 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.89 80.0 6.09e-01 100.0% 45.4%
3626919 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.89 86.0 6.27e-01 100.0% 44.4%
5064209 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.89 81.0 6.38e-01 100.0% 51.0%
139765 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.89 80.0 6.09e-01 100.0% 44.9%
4946006 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.89 77.0 6.23e-01 100.0% 52.1%
3970341 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.89 85.0 6.49e-01 100.0% 49.6%
3518925 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.89 85.0 6.40e-01 100.0% 47.4%
167335 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.89 85.0 6.54e-01 100.0% 59.6%
4032813 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.89 85.0 6.78e-01 100.0% 56.2%
3431616 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.89 85.0 5.22e-01 100.0% 25.5%
3209390 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.89 85.0 5.82e-01 100.0% 48.6%
135722 2002.1.1.107 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD,DUF4996 0.89 79.0 6.08e-01 100.0% 45.7%
3285605 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.88 85.0 6.14e-01 100.0% 50.6%
3428621 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.88 84.0 5.89e-01 100.0% 46.3%
None — 0.88 85.0 6.26e-01 100.0% 44.2%
3962522 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.88 85.0 6.48e-01 100.0% 54.2%
137626 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.88 85.0 6.32e-01 100.0% 55.6%
3596227 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.88 85.0 6.45e-01 100.0% 49.3%
5083480 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.88 84.0 6.61e-01 100.0% 53.4%
None — 0.88 84.0 6.70e-01 100.0% 55.6%
339021 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.88 84.0 6.70e-01 100.0% 55.6%
3849305 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.88 85.0 6.22e-01 100.0% 43.3%
5059953 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.88 71.0 5.78e-01 100.0% 49.6%
3758789 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.88 84.0 6.17e-01 100.0% 51.7%
3926373 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.88 84.0 6.29e-01 100.0% 46.6%
None — 0.88 84.0 6.29e-01 100.0% 55.3%
3969585 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.88 83.0 6.69e-01 100.0% 57.0%
4944840 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.88 84.0 6.73e-01 100.0% 57.5%
163625 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.87 84.0 6.68e-01 100.0% 55.5%
5053547 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.87 75.0 5.94e-01 100.0% 47.8%
3718053 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.87 84.0 6.17e-01 100.0% 44.5%
5045042 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.87 83.0 6.43e-01 100.0% 50.7%
5041537 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.87 84.0 6.52e-01 100.0% 55.4%
4029798 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.87 83.0 5.89e-01 100.0% 53.6%
3946662 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.87 83.0 6.41e-01 100.0% 51.1%
3634988 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.87 84.0 6.15e-01 100.0% 44.2%
3755452 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.87 84.0 6.12e-01 100.0% 43.2%
4498296 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.87 83.0 6.68e-01 100.0% 57.4%
142980 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.87 83.0 6.56e-01 100.0% 54.2%
None — 0.87 83.0 6.11e-01 100.0% 52.4%
3223347 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.86 78.0 5.85e-01 100.0% 43.8%
3741781 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.86 82.0 6.40e-01 100.0% 51.9%
378990 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.86 80.0 6.33e-01 100.0% 52.8%
3172648 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.86 81.0 5.93e-01 100.0% 41.9%
5009583 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.86 74.0 6.10e-01 100.0% 54.2%
3590456 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.86 82.0 6.57e-01 100.0% 57.1%
3185090 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.86 82.0 6.47e-01 100.0% 54.4%
4031027 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.85 79.0 6.37e-01 100.0% 55.7%
3587873 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.85 80.0 6.26e-01 100.0% 52.2%
5053058 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.84 61.0 5.11e-01 83.1% 47.0%
3264775 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.84 80.0 5.72e-01 100.0% 45.7%
3788404 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.83 79.0 5.60e-01 100.0% 40.6%
3808715 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.82 78.0 5.87e-01 100.0% 45.6%
3179024 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.81 77.0 5.53e-01 100.0% 46.6%
162906 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.81 77.0 6.10e-01 100.0% 53.9%
3932718 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.81 77.0 5.48e-01 100.0% 56.8%
3798237 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.81 77.0 5.59e-01 100.0% 56.4%
None — 0.79 76.0 5.72e-01 100.0% 46.9%
3718085 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.79 75.0 5.56e-01 100.0% 50.2%
3509909 2002.1.1.106 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.78 60.0 4.93e-01 100.0% 47.0%
5069292 2484.1.1.38 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › eRF1_2 0.56 37.0 4.05e-01 84.6% 80.9%
5058066 2484.1.1.38 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › eRF1_2 0.54 36.0 3.90e-01 82.4% 80.0%
4425543 2484.1.1.38 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › eRF1_2 0.53 37.0 3.90e-01 84.6% 77.6%
D6 medium residues 1125-1149_1166-1210_1267-1293
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2yrlA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 36.0 3.83e-01 99.0% 79.5%
1w0pA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 47.0 3.90e-01 100.0% 96.6%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3807468 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.61 55.0 4.20e-01 100.0% 80.4%
3764432 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 28.0 3.35e-01 74.2% 80.0%
D7 medium residues 1150-1165_1211-1266
PDB
Domain cluster: representative
CATH (57)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1gv9A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.78 71.0 4.97e-01 100.0% 60.1%
2durB01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.77 70.0 4.84e-01 100.0% 61.1%
5ocrA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.75 66.0 4.40e-01 97.2% 47.5%
5ocqA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.75 66.0 4.41e-01 97.2% 46.5%
4ozxA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.75 67.0 4.46e-01 100.0% 52.3%
3b5qA00 3.40.720.10 Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A 0.74 48.0 2.90e-01 98.6% 10.3%
1hlcA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.74 65.0 5.37e-01 98.6% 76.7%
3zxfA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.73 66.0 5.32e-01 100.0% 77.0%
5xnrA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.73 63.0 4.41e-01 98.6% 50.4%
7c8fA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.71 64.0 4.34e-01 100.0% 56.2%
1uaiA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.71 64.0 4.46e-01 98.6% 42.6%
4ccdA03 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.71 64.0 4.63e-01 100.0% 52.5%
5nslA02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.71 64.0 4.64e-01 100.0% 56.6%
7erlA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.71 63.0 4.72e-01 100.0% 58.7%
1st8A02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.71 63.0 4.63e-01 100.0% 76.8%
1yrzA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.71 63.0 4.55e-01 100.0% 53.2%
3ligA02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.70 63.0 4.78e-01 100.0% 71.6%
4ym3C00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.70 63.0 5.03e-01 100.0% 75.0%
3pijA02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.70 63.0 4.90e-01 98.6% 71.1%
5z5dA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.70 63.0 4.56e-01 100.0% 57.8%
5jowA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.70 62.0 4.50e-01 100.0% 52.0%
2cwsA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.69 60.0 4.25e-01 98.6% 49.3%
6n44A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.69 59.0 4.84e-01 98.6% 74.8%
1ms5B02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.68 60.0 4.15e-01 100.0% 40.5%
1y4wA02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.68 60.0 4.64e-01 98.6% 66.7%
4eqvA02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.68 60.0 4.55e-01 100.0% 70.5%
2d44A01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.67 60.0 3.89e-01 100.0% 40.6%
3kf3A02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.67 59.0 4.48e-01 100.0% 69.5%
1w2tA02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.67 61.0 4.92e-01 100.0% 67.9%
5mc9A02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.67 59.0 4.43e-01 100.0% 57.1%
8a7dC01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.66 56.0 4.10e-01 98.6% 51.9%
2wjsA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.66 59.0 4.40e-01 100.0% 56.3%
2v7sA00 3.30.2030.20 Alpha Beta › 2-Layer Sandwich › TBP-like › 0.66 39.0 2.96e-01 95.8% 24.9%
6nu8A02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.66 57.0 4.60e-01 98.6% 72.0%
3qcwA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.66 57.0 4.23e-01 98.6% 55.9%
3pveA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.66 54.0 4.18e-01 94.4% 54.3%
4fffA02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.65 56.0 4.50e-01 100.0% 81.0%
2wjsA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.65 58.0 4.38e-01 100.0% 62.3%
1epwA03 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.65 59.0 4.10e-01 100.0% 48.9%
4pbpA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.64 55.0 4.04e-01 98.6% 47.6%
1okqA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.64 56.0 4.28e-01 100.0% 56.0%
1qu0C00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.64 57.0 4.20e-01 98.6% 54.6%
7qs4A01 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.64 54.0 4.13e-01 98.6% 58.1%
2jkgA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.63 43.0 3.30e-01 97.2% 30.9%
3ugfB02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.63 54.0 4.16e-01 100.0% 72.3%
3sh4A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.63 55.0 4.07e-01 100.0% 53.3%
3c1aA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.62 44.0 3.53e-01 75.0% 44.8%
2r1bA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.61 53.0 3.93e-01 100.0% 57.6%
2ciuA00 3.10.450.320 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Mitochondrial import inner membrane translocase subunit Tim21 0.60 46.0 3.88e-01 97.2% 48.8%
1cq3A00 2.60.240.10 Mainly Beta › Sandwich › Viral Chemokine Inhibitor; Chain A › Major secreted virus protein 0.57 51.0 3.56e-01 98.6% 44.6%
1mdcA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 48.0 3.87e-01 94.4% 100.0%
4yg6B00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 46.0 3.65e-01 98.6% 75.5%
1yqzA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.54 43.0 3.80e-01 98.6% 59.3%
2fblB00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.53 45.0 3.62e-01 97.2% 67.6%
1yemB00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.51 42.0 3.29e-01 93.1% 71.1%
1ydwA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.51 45.0 3.19e-01 97.2% 61.4%
4mhxA01 3.40.720.10 Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A 0.50 45.0 2.75e-01 100.0% 19.4%
ECOD (57)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3190424 10.1.1.49 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_59_C 0.80 74.0 5.40e-01 100.0% 61.1%
3238369 12.1.1.88 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › DUF5386 0.80 48.0 5.47e-01 95.8% 81.1%
3849049 10.1.1.19 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_leg-like 0.77 70.0 4.73e-01 100.0% 54.9%
5038444 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.75 48.0 4.88e-01 90.3% 67.1%
2389074 10.1.1.27 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Alginate_lyase2 0.74 67.0 4.51e-01 100.0% 53.5%
4951973 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.74 48.0 5.40e-01 98.6% 87.3%
3408648 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.73 52.0 4.68e-01 100.0% 54.0%
3482455 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.72 65.0 4.64e-01 100.0% 49.0%
2491351 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.72 64.0 4.42e-01 100.0% 49.8%
3474665 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.72 65.0 4.72e-01 100.0% 66.3%
3585860 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.72 64.0 4.98e-01 98.6% 72.7%
3221268 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.70 64.0 4.93e-01 100.0% 60.0%
3878495 633.23.1.1 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin 0.70 51.0 3.57e-01 98.6% 25.6%
3399344 10.1.1.63 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Methyltransf_FA 0.70 62.0 4.98e-01 97.2% 73.3%
3722618 10.1.1.26 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_32C 0.69 62.0 4.69e-01 100.0% 67.6%
3599615 10.1.1.26 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_32C 0.69 62.0 4.52e-01 100.0% 66.3%
3832214 10.1.1.63 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Methyltransf_FA 0.69 62.0 4.72e-01 100.0% 66.7%
3394865 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.68 61.0 4.46e-01 100.0% 56.4%
3403785 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.68 61.0 4.42e-01 100.0% 54.5%
4003250 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.67 61.0 4.93e-01 100.0% 72.6%
4878866 222.1.1.17 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PKS_DH_N 0.67 58.0 4.99e-01 97.2% 92.1%
135303 10.1.1.1 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_1 0.66 59.0 4.39e-01 100.0% 55.7%
3579826 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.66 58.0 4.27e-01 100.0% 54.9%
3988102 222.1.1.16 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › Acyl-ACP_TE_C 0.66 55.0 4.97e-01 93.1% 90.0%
3520852 3794.1.1.0 ↗ a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit 0.66 43.0 3.39e-01 98.6% 32.0%
3580813 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.66 58.0 4.16e-01 100.0% 47.9%
3993597 10.1.1.8 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY 0.66 58.0 4.30e-01 100.0% 50.0%
3338395 222.1.1.1 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › MaoC_dehydratas 0.66 55.0 4.47e-01 94.4% 89.3%
3557419 10.1.1.1 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_1 0.65 56.0 4.23e-01 100.0% 55.8%
2324013 10.1.1.1 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_1 0.65 58.0 4.30e-01 100.0% 54.0%
4002855 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.65 58.0 4.11e-01 100.0% 46.2%
4496880 10.1.1.26 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_32C 0.65 57.0 4.28e-01 100.0% 65.2%
3411805 10.1.1.1 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_1 0.65 55.0 4.15e-01 100.0% 50.8%
3512771 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.64 55.0 4.22e-01 100.0% 58.9%
3495596 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.64 57.0 4.01e-01 100.0% 49.1%
3727946 222.1.1.1 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › MaoC_dehydratas 0.63 53.0 4.54e-01 94.4% 95.8%
3479441 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.62 54.0 3.60e-01 100.0% 57.5%
3627339 10.1.1.1 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_1 0.62 54.0 3.97e-01 100.0% 51.5%
169012 223.2.1.1 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin 0.61 42.0 3.24e-01 97.2% 30.6%
5048388 10.1.1.35 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 0.61 55.0 4.61e-01 100.0% 70.8%
3219188 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.60 50.0 3.82e-01 97.2% 51.6%
1569478 527.1.1.1 ↗ beta sandwiches › Soluble secreted chemokine inhibitor, VCCI › Soluble secreted chemokine inhibitor, VCCI › Soluble secreted chemokine inhibitor, VCCI › Orthopox_35kD 0.58 52.0 4.05e-01 98.6% 70.6%
3282528 3844.2.1.1 ↗ a+b two layers › hydrogenase expression protein-like › MybT EspG5 chaperone › MybT EspG5 chaperone › ESX-1_EspG 0.56 49.0 3.43e-01 97.2% 69.1%
3287954 10.12.1.75 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AraC_binding_2 0.55 48.0 3.49e-01 98.6% 59.0%
4931409 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 40.0 3.37e-01 79.2% 83.8%
3170989 5.1.4.262 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_CAF1B_HIR1 0.54 44.0 2.81e-01 95.8% 86.7%
3700773 7520.1.1.0 ↗ a/b three-layered sandwiches › CinA-like › CinA-like › CinA-like 0.54 49.0 3.61e-01 98.6% 53.3%
3601126 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.54 49.0 3.00e-01 100.0% 23.8%
None — 0.54 48.0 3.08e-01 100.0% 22.6%
3360289 210.2.1.1 ↗ a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C 0.53 47.0 3.45e-01 100.0% 76.9%
3927191 633.23.1.4 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin › Claudin_2 0.53 47.0 3.28e-01 100.0% 35.3%
4968312 2484.1.1.66 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_3 0.52 46.0 3.32e-01 100.0% 84.1%
3192871 220.1.1.194 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_2nd_LRR 0.52 36.0 2.77e-01 72.2% 61.7%
4034521 220.1.1.87 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_3 0.51 45.0 4.06e-01 98.6% 90.0%
3316283 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 41.0 2.63e-01 95.8% 90.4%
3875424 5.1.4.428 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, LLGL, Lgl_C 0.51 40.0 2.31e-01 90.3% 45.9%
3484274 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.50 44.0 3.53e-01 97.2% 87.1%