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MH019215.1__AVP41387.1__SEA_YARA_53__00053
Bact-VirMH019215.1__AVP41387.1__SEA_YARA_53__00053
Identity
- Accession:
- MH019215 ↗
- Kingdom:
- phage
Quality
67.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-62
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2lhrA00 | 1.20.58.1270 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.68 | 45.0 | 4.12e-01 | 72.4% | 51.3% |
| 2crbA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.68 | 50.0 | 4.16e-01 | 77.6% | 60.8% |
| 1gw5A00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.67 | 47.0 | 2.68e-01 | 72.4% | 7.2% |
| 5cy5B00 | 1.20.1200.10 | Mainly Alpha › Up-down Bundle › Hypothetical Protein Ta1238; Chain: A; › Cobalamin adenosyltransferase-like | 0.65 | 57.0 | 4.23e-01 | 98.3% | 77.2% |
| 4fd5A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.62 | 54.0 | 3.68e-01 | 100.0% | 44.4% |
| 3m7gA02 | 1.10.8.1010 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.62 | 50.0 | 4.31e-01 | 91.4% | 63.2% |
| 2zkzC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 38.0 | 3.31e-01 | 72.4% | 82.8% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4954852 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.75 | 51.0 | 3.54e-01 | 72.4% | 23.7% |
| 4001318 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.75 | 53.0 | 4.85e-01 | 74.1% | 58.7% |
| 5005635 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.74 | 54.0 | 5.57e-01 | 98.3% | 81.8% |
| 5081365 | 601.33.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › CHAD domain › CHAD domain | 0.71 | 50.0 | 3.68e-01 | 74.1% | 30.3% |
| 3751351 | 3796.1.1.0 ↗ | alpha arrays › Iron-regulated surface determinant protein H linker domain › Iron-regulated surface determinant protein H linker domain › Iron-regulated surface determinant protein H linker domain | 0.59 | 43.0 | 4.18e-01 | 79.3% | 70.8% |
| 4961899 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.56 | 49.0 | 4.69e-01 | 96.6% | 81.5% |
| 3538668 | 4244.1.1.5 ↗ | a/b three-layered sandwiches › EreA/ChaN-like › EreA/ChaN-like › EreA/ChaN-like › TraB_PrgY_gumN | 0.51 | 44.0 | 2.87e-01 | 100.0% | 63.3% |