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MH019216.1__AVP41540.1__SEA_WENTWORTH_101__00101

Bact-Vir

MH019216.1__AVP41540.1__SEA_WENTWORTH_101__00101

Identity

Accession:
MH019216 ↗
Kingdom:
phage

Quality

85.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-54
PDB
Domain cluster: representative
CATH (24)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7q5yB01 3.30.460.80 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit 0.68 54.0 4.30e-01 94.3% 41.7%
3jb9a02 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.65 55.0 5.27e-01 100.0% 88.9%
2m88A01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.64 55.0 4.77e-01 100.0% 70.9%
1whyA01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.64 53.0 4.96e-01 100.0% 88.9%
2kkhA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.63 52.0 4.75e-01 100.0% 80.0%
1k3sA00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.63 46.0 3.80e-01 83.0% 63.0%
3d7aA01 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.60 50.0 3.84e-01 100.0% 71.3%
3e9lA02 1.20.80.40 Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › Prp8 RNase H domain, fingers region 0.60 50.0 4.26e-01 100.0% 93.7%
2y8yA02 3.30.70.1210 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 2 0.56 46.0 3.77e-01 100.0% 87.8%
3ezjA03 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.56 46.0 4.57e-01 100.0% 92.7%
2rsiA02 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.55 31.0 3.47e-01 100.0% 89.7%
3u21A00 1.10.10.2430 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NFRKB winged helix-like domain 0.55 45.0 3.72e-01 98.1% 89.0%
2drpA02 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.55 30.0 3.44e-01 98.1% 86.2%
2nwuB01 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.55 44.0 3.54e-01 100.0% 75.4%
2xfvA00 3.10.260.30 Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › 0.54 43.0 3.51e-01 92.5% 61.1%
2uv8A06 3.30.70.2490 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 40.0 3.75e-01 84.9% 64.2%
5i41B00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.54 43.0 4.10e-01 100.0% 76.1%
4r24B00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.53 42.0 3.77e-01 100.0% 60.0%
1vrmA02 1.10.3980.10 Mainly Alpha › Orthogonal Bundle › T-fold › ApbE-like superfamily 0.53 39.0 3.38e-01 88.7% 83.2%
1xjuA00 1.10.530.40 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.53 41.0 3.10e-01 92.5% 48.1%
5unhA02 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.52 41.0 2.68e-01 92.5% 52.4%
1f0jA00 1.10.1300.10 Mainly Alpha › Orthogonal Bundle › Catalytic domain of cyclic nucleotide phosphodiesterase 4b2b › 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain 0.52 43.0 2.69e-01 98.1% 41.3%
3zcoA00 1.10.10.2450 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.50 37.0 2.92e-01 100.0% 35.4%
1z1nX02 3.90.10.10 Alpha Beta › Alpha-Beta Complex › Cytochrome C3 › Cytochrome C3 0.50 38.0 3.21e-01 96.2% 94.9%
ECOD (48)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5010613 3696.1.1.0 a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related 0.76 63.0 5.92e-01 100.0% 75.4%
4327654 327.16.1.10 a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › PF29189 0.73 63.0 6.11e-01 100.0% 90.0%
3975095 327.16.1.10 a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › PF29189 0.72 62.0 6.01e-01 100.0% 91.7%
3470093 3696.1.1.1 a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › HARP 0.71 58.0 5.49e-01 100.0% 75.4%
3701635 3696.1.1.0 a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related 0.71 64.0 5.24e-01 100.0% 55.8%
3533206 3696.1.1.1 a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › HARP 0.71 58.0 5.47e-01 100.0% 75.4%
4453821 3253.1.1.0 a+b two layers › ferredoxin-like domain in flagellar biosynthesis protein flhA › ferredoxin-like domain in flagellar biosynthesis protein flhA › ferredoxin-like domain in flagellar biosynthesis protein flhA 0.70 49.0 5.21e-01 90.6% 88.9%
4660335 327.16.1.10 a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › PF29189 0.70 60.0 6.00e-01 100.0% 100.0%
4471453 327.16.1.10 a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › PF29189 0.70 59.0 5.78e-01 100.0% 90.0%
3734074 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.69 56.0 5.26e-01 96.2% 94.3%
4314745 304.117.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC 0.69 59.0 5.48e-01 100.0% 78.6%
3409500 3696.1.1.1 a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › HARP 0.67 56.0 5.16e-01 100.0% 72.9%
3581763 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.67 56.0 5.24e-01 100.0% 81.4%
3229861 3696.1.1.1 a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › HARP 0.66 55.0 5.13e-01 100.0% 74.3%
4986306 304.22.1.0 a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain 0.66 51.0 5.00e-01 90.6% 78.3%
4028694 306.3.1.0 a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like 0.65 52.0 4.99e-01 100.0% 76.9%
4636695 304.36.1.1 a+b two layers › Alpha-beta plaits › YajQ-like › YajQ-like › DUF520 0.63 51.0 4.84e-01 96.2% 80.9%
2142230 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.63 50.0 4.92e-01 88.7% 98.2%
4816243 304.9.1.1 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.62 49.0 4.43e-01 92.5% 70.5%
4414604 2004.1.1.272 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RNA12 0.60 49.0 2.89e-01 100.0% 10.9%
5073703 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.60 47.0 4.86e-01 100.0% 100.0%
3236657 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.59 33.0 3.57e-01 98.1% 60.0%
4220398 304.48.1.11 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RNA_pol 0.59 49.0 3.57e-01 100.0% 58.2%
3867165 3871.1.1.0 alpha duplicates or obligate multimers › PHIST › PHIST › PHIST 0.59 41.0 3.19e-01 77.4% 72.1%
3756888 601.1.1.0 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin 0.59 42.0 3.09e-01 79.2% 80.0%
3357520 310.2.1.28 a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › Myb_DNA-bind_3 0.59 43.0 3.78e-01 94.3% 50.6%
5062966 327.11.1.16 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › KH_1 0.59 45.0 4.39e-01 88.7% 95.0%
5054810 304.7.1.0 a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors 0.58 49.0 4.49e-01 100.0% 70.7%
3369708 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.58 33.0 3.76e-01 100.0% 74.3%
3396272 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.58 31.0 3.64e-01 98.1% 86.7%
3932469 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.57 44.0 3.87e-01 86.8% 88.2%
None 0.56 30.0 3.03e-01 100.0% 47.3%
3794387 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.56 31.0 3.64e-01 98.1% 82.9%
4023293 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 42.0 3.38e-01 84.9% 84.5%
3392806 386.1.1.397 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › PF30016 0.55 30.0 3.43e-01 84.9% 76.7%
5053453 386.1.1.74 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-Di19 0.55 30.0 3.06e-01 98.1% 47.3%
5064677 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 45.0 3.79e-01 100.0% 83.8%
3430296 386.1.1.26 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_6 0.55 31.0 3.06e-01 77.4% 46.6%
3282573 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.55 44.0 3.49e-01 98.1% 40.8%
3491841 386.1.1.1 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.54 30.0 3.40e-01 98.1% 74.3%
4030472 316.1.1.36 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central 0.54 41.0 2.89e-01 86.8% 39.5%
3230649 5001.1.1.0 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.53 41.0 2.66e-01 92.5% 54.2%
3485009 386.1.1.24 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_4 0.53 32.0 2.96e-01 100.0% 42.9%
3838276 101.1.2.19 alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac 0.53 39.0 2.88e-01 90.6% 86.3%
7422 235.1.1.6 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Phage_lysozyme 0.53 41.0 3.10e-01 92.5% 48.1%
4022449 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 41.0 2.99e-01 94.3% 90.6%
3868769 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.51 31.0 3.18e-01 98.1% 54.0%
5042767 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.50 37.0 3.30e-01 92.5% 64.3%
D2 high residues 60-124
PDB
Domain cluster: representative
CATH (71)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3gnlA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.79 49.0 3.56e-01 100.0% 24.8%
7dl8C01 3.30.110.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain 0.75 52.0 4.63e-01 100.0% 52.8%
3p96A02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.74 51.0 4.71e-01 100.0% 56.0%
2nwuB01 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.74 48.0 3.86e-01 100.0% 34.9%
4qdjA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.73 50.0 3.49e-01 100.0% 22.6%
2dchX01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.72 45.0 3.99e-01 100.0% 44.1%
1vx4407 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.70 43.0 4.26e-01 100.0% 58.0%
4exrA01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.69 45.0 4.19e-01 92.3% 53.1%
2lqjA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.69 49.0 4.35e-01 100.0% 52.1%
2qmxA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.68 45.0 4.07e-01 100.0% 48.9%
5mmjh01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.65 42.0 3.99e-01 100.0% 56.0%
1v2bB00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.65 45.0 3.41e-01 70.8% 49.0%
1zpvA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.65 45.0 4.13e-01 100.0% 54.1%
3fncB00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.65 44.0 3.33e-01 70.8% 84.5%
5is2A01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.65 44.0 3.99e-01 100.0% 50.5%
1u8sA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.64 44.0 4.02e-01 100.0% 53.5%
4lubB01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.64 43.0 3.82e-01 100.0% 46.0%
2qmwA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.64 42.0 3.74e-01 100.0% 47.3%
1u8sA02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.64 43.0 4.02e-01 100.0% 54.8%
3mwbB03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.64 44.0 3.90e-01 100.0% 49.5%
3ibwA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.63 43.0 4.04e-01 100.0% 58.2%
5i2cB01 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.63 42.0 3.26e-01 100.0% 30.8%
4rv9A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.63 54.0 3.76e-01 100.0% 30.3%
2f06A00 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.63 42.0 3.33e-01 100.0% 31.9%
2onlC01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.62 44.0 4.05e-01 100.0% 57.0%
3ndiA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.62 53.0 3.72e-01 100.0% 30.2%
1sc6A03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.62 42.0 3.91e-01 100.0% 54.9%
4exrA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 40.0 3.93e-01 93.8% 60.6%
2nyiA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.61 41.0 3.91e-01 100.0% 56.8%
2yx1A01 3.30.70.2580 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 38.0 3.84e-01 100.0% 60.6%
3hyiA01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.61 49.0 3.52e-01 89.2% 44.5%
2yqzA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.60 47.0 3.39e-01 100.0% 29.0%
1ygyA04 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.60 41.0 4.01e-01 100.0% 63.2%
3c1mA02 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.60 41.0 3.17e-01 100.0% 29.3%
3tviA02 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.59 42.0 3.21e-01 100.0% 30.8%
5mmiU01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.59 42.0 3.89e-01 100.0% 58.5%
2dulA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.59 51.0 3.33e-01 100.0% 24.7%
1mruA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.59 46.0 4.11e-01 100.0% 59.8%
3axsA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.59 51.0 3.29e-01 100.0% 23.6%
3merA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.59 47.0 3.46e-01 100.0% 32.9%
4q7aC02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 52.0 4.39e-01 100.0% 64.8%
4ha7B00 3.40.430.10 Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A 0.58 39.0 2.81e-01 100.0% 22.0%
5qinA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.58 43.0 3.95e-01 100.0% 60.0%
2gysA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 43.0 3.96e-01 100.0% 60.5%
3b5iB01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 50.0 3.46e-01 100.0% 50.2%
4tpvA00 3.40.33.10 Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP 0.58 51.0 3.73e-01 100.0% 39.0%
1wg1A01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.57 34.0 3.35e-01 100.0% 53.5%
1juvA00 3.40.430.10 Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A 0.57 40.0 2.92e-01 98.5% 25.4%
3njcA00 3.30.1380.20 Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › Trafficking protein particle complex subunit 3 0.57 44.0 3.47e-01 89.2% 81.7%
3eeeA00 3.90.1520.10 Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain 0.56 43.0 3.24e-01 87.7% 94.7%
5xoyB02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 49.0 4.19e-01 100.0% 64.5%
3f62A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 45.0 3.83e-01 100.0% 54.6%
5heeA00 3.40.830.10 Alpha Beta › 3-Layer(aba) Sandwich › Protocatechuate 4,5-dioxygenase; Chain B › LigB-like 0.55 47.0 3.17e-01 100.0% 97.3%
3keyA02 3.30.1370.230 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Stn1, C-terminal wHTH domain 0.54 39.0 3.68e-01 81.5% 95.5%
2nq2D00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 40.0 2.81e-01 83.1% 87.9%
5w7tA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.54 41.0 3.58e-01 98.5% 54.6%
1r89A03 3.30.70.590 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Poly(A) polymerase predicted RNA binding domain 0.54 41.0 3.36e-01 100.0% 41.8%
4djbA00 3.30.70.2870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Mastadenovirus E4 ORF3 0.53 45.0 3.80e-01 100.0% 54.2%
2wdoA00 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.53 44.0 3.75e-01 100.0% 95.1%
2oojA00 2.40.350.10 Mainly Beta › Beta Barrel › AOC barrel-like › SO1590-like 0.53 45.0 3.69e-01 100.0% 95.4%
1jj2L00 3.40.1120.10 Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal protein L15e › Ribosomal protein L15 0.53 46.0 3.34e-01 100.0% 37.6%
1s67L00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.53 48.0 3.88e-01 100.0% 83.2%
1f49A05 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.53 44.0 2.88e-01 93.8% 32.8%
3tmaA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 47.0 3.43e-01 100.0% 40.7%
2qswA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.52 37.0 3.37e-01 100.0% 54.4%
5xukA00 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.52 43.0 3.73e-01 100.0% 97.4%
3tm4A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 45.0 3.34e-01 100.0% 39.4%
4oi3A00 3.30.70.3090 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ORF SCO4226, nickel-binding ferredoxin-like monomer 0.51 36.0 3.48e-01 100.0% 63.0%
2rsvA00 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.51 44.0 2.69e-01 100.0% 15.6%
2x7bA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.50 35.0 2.82e-01 76.9% 99.4%
1i72A00 3.60.90.10 Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase 0.50 43.0 2.98e-01 100.0% 64.5%
ECOD (95)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3803370 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.74 49.0 4.60e-01 100.0% 56.4%
3383879 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.73 50.0 4.82e-01 100.0% 62.7%
3364258 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.73 51.0 4.60e-01 100.0% 54.5%
3655967 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.72 48.0 4.28e-01 100.0% 47.4%
3382396 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.72 50.0 4.61e-01 100.0% 56.5%
3372798 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.72 48.0 4.40e-01 100.0% 52.9%
3365684 306.6.1.0 a+b two layers › Glucose permease domain IIB-like › PH0987 N-terminal domain-like › PH0987 N-terminal domain-like 0.71 48.0 4.15e-01 100.0% 45.0%
3655963 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.71 47.0 4.63e-01 100.0% 64.3%
3319316 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.70 50.0 4.80e-01 100.0% 66.7%
3829402 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.69 49.0 4.60e-01 100.0% 61.3%
3333863 304.8.1.47 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_ACR9_3rd 0.69 46.0 3.97e-01 100.0% 41.8%
3277896 2003.1.5.5 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › UPF0020 0.69 42.0 3.07e-01 100.0% 22.3%
3369895 304.12.1.0 a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 0.68 46.0 4.05e-01 100.0% 47.4%
4963984 304.8.1.9 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_6 0.68 46.0 4.33e-01 100.0% 57.5%
5051924 304.8.1.12 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_8 0.68 47.0 4.77e-01 100.0% 73.8%
4927585 304.8.1.9 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_6 0.67 45.0 4.28e-01 100.0% 57.5%
5005586 304.8.1.9 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_6 0.66 45.0 4.21e-01 100.0% 55.3%
3817811 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.66 45.0 4.14e-01 100.0% 54.1%
3641084 387.1.5.31 few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like › PF29352 0.66 47.0 5.14e-01 100.0% 90.7%
4991070 304.8.1.43 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_5 0.66 45.0 4.41e-01 100.0% 65.7%
3950125 304.8.1.9 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_6 0.66 45.0 4.06e-01 100.0% 51.1%
4988966 304.8.1.8 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_4 0.66 44.0 4.29e-01 100.0% 61.3%
4234778 304.8.1.9 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_6 0.66 44.0 4.08e-01 100.0% 51.7%
3436180 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.65 47.0 4.63e-01 100.0% 71.4%
3284562 304.8.1.9 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_6 0.65 44.0 4.09e-01 100.0% 54.1%
3464409 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.65 44.0 4.26e-01 100.0% 61.3%
3974776 304.8.1.9 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_6 0.65 44.0 4.22e-01 100.0% 61.3%
5023619 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.64 43.0 4.19e-01 100.0% 61.3%
3970195 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.64 43.0 3.87e-01 100.0% 48.4%
3307398 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.64 43.0 3.69e-01 100.0% 41.8%
5016099 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.64 42.0 4.29e-01 100.0% 69.2%
3603586 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.64 43.0 4.25e-01 100.0% 65.7%
3837690 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.64 43.0 4.16e-01 100.0% 61.3%
3303164 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.64 43.0 4.36e-01 100.0% 70.8%
4929473 304.39.1.0 a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain 0.64 45.0 4.21e-01 100.0% 58.8%
3974225 304.8.1.8 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_4 0.64 42.0 4.01e-01 100.0% 56.2%
5265 304.8.1.12 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_8 0.64 42.0 4.09e-01 100.0% 62.0%
3825541 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.63 43.0 3.66e-01 100.0% 41.8%
5017055 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.63 43.0 4.13e-01 100.0% 61.3%
4935347 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.63 42.0 4.15e-01 100.0% 64.3%
4954911 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.63 43.0 4.00e-01 100.0% 55.3%
4931004 304.8.1.12 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_8 0.63 43.0 4.32e-01 100.0% 70.8%
3659065 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.63 42.0 3.72e-01 100.0% 46.0%
5266 304.8.1.12 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_8 0.63 42.0 4.20e-01 100.0% 65.7%
5021279 304.8.1.12 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_8 0.63 42.0 4.05e-01 100.0% 60.0%
3655990 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.63 42.0 4.65e-01 100.0% 92.0%
3367924 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.63 42.0 3.54e-01 100.0% 38.3%
3611407 306.10.1.0 a+b two layers › Glucose permease domain IIB-like › H1 domain of KCTD12 › H1 domain of KCTD12 0.63 56.0 4.49e-01 100.0% 88.3%
3367471 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.63 42.0 4.16e-01 100.0% 65.7%
3965651 304.8.1.8 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_4 0.62 42.0 4.07e-01 100.0% 61.3%
5040551 304.8.1.12 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_8 0.62 41.0 4.18e-01 100.0% 69.2%
4656385 304.8.1.47 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_ACR9_3rd 0.62 41.0 3.86e-01 100.0% 52.9%
4214077 304.8.1.8 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_4 0.62 41.0 4.00e-01 100.0% 60.0%
3803029 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.62 42.0 4.15e-01 100.0% 65.7%
4616161 304.8.1.47 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_ACR9_3rd 0.62 42.0 3.63e-01 100.0% 43.8%
3368757 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.62 42.0 3.75e-01 100.0% 48.4%
4955435 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.62 42.0 4.03e-01 100.0% 61.3%
5046881 328.8.1.0 a+b two layers › IF3-like › Schlafen 8 › Schlafen 8 0.62 53.0 4.40e-01 100.0% 55.5%
3386440 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.62 42.0 4.04e-01 100.0% 61.3%
5039113 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.62 41.0 4.13e-01 100.0% 69.2%
3348806 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.62 42.0 4.03e-01 100.0% 61.3%
3641835 304.8.1.9 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_6 0.61 42.0 3.63e-01 100.0% 46.0%
5039114 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.61 41.0 4.30e-01 100.0% 76.7%
4274665 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.61 41.0 3.63e-01 100.0% 44.7%
4990693 2.21.1.5 beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) › PF27234 0.61 56.0 4.04e-01 100.0% 97.1%
4515771 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.61 41.0 3.66e-01 100.0% 46.0%
5042991 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.61 41.0 3.99e-01 100.0% 61.3%
3367405 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.61 41.0 3.55e-01 100.0% 41.8%
3427288 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.61 40.0 3.41e-01 100.0% 37.5%
3271172 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.61 52.0 3.61e-01 100.0% 27.1%
3816023 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.61 41.0 3.89e-01 100.0% 57.5%
4298844 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.61 41.0 3.69e-01 100.0% 48.4%
3308868 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.61 41.0 3.59e-01 100.0% 43.8%
3371194 7501.1.1.0 a/b three-layered sandwiches › Dihydrofolate reductases › Dihydrofolate reductases › Dihydrofolate reductases 0.61 43.0 3.09e-01 100.0% 23.4%
4940222 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.60 41.0 4.12e-01 100.0% 70.8%
3679423 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.60 41.0 3.94e-01 100.0% 61.3%
5023038 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.60 40.0 3.82e-01 100.0% 56.2%
3803422 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.60 40.0 4.01e-01 100.0% 65.7%
3438053 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.60 43.0 4.12e-01 100.0% 65.3%
3667551 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.60 39.0 3.63e-01 100.0% 48.9%
3377982 304.8.1.57 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_ACR_D1 0.60 40.0 3.70e-01 100.0% 51.1%
3684865 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.60 41.0 3.61e-01 100.0% 45.7%
5068395 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.60 40.0 4.07e-01 100.0% 70.8%
3600520 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.59 40.0 3.78e-01 100.0% 56.2%
3954005 256.1.1.0 a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like 0.59 42.0 4.30e-01 100.0% 85.0%
4986600 304.8.1.12 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_8 0.58 33.0 2.76e-01 84.6% 29.2%
3831038 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.57 41.0 3.93e-01 100.0% 65.3%
3232572 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.56 37.0 3.62e-01 100.0% 60.0%
3564635 2003.1.5.5 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › UPF0020 0.55 48.0 3.31e-01 100.0% 34.8%
4965043 328.5.1.1 a+b two layers › IF3-like › SirA-like › SirA-like › TusA 0.54 48.0 4.51e-01 100.0% 93.6%
4265803 304.28.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.53 46.0 3.74e-01 100.0% 50.8%
3704046 304.55.2.0 a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like 0.52 43.0 3.82e-01 100.0% 63.2%
4239859 387.1.5.7 few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like › SCRL 0.51 38.0 3.91e-01 100.0% 86.7%
3591567 304.55.2.0 a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like 0.51 43.0 3.85e-01 100.0% 66.7%
3606910 375.1.1.207 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › FAZ1_cons 0.51 42.0 3.71e-01 100.0% 63.2%