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MH020237.1__AVP41937.1__SEA_JSQUARED_97__00096
Bact-VirMH020237.1__AVP41937.1__SEA_JSQUARED_97__00096
Identity
- Accession:
- MH020237 ↗
- Kingdom:
- phage
Quality
95.2
mean pLDDT
Taxonomy
TaxID: 2126814
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-95
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1iz6A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 48.0 | 5.32e-01 | 86.0% | 94.2% |
| 2p84A02 | 2.30.30.290 | Mainly Beta › Roll › SH3 type barrels. › YopX-like domains | 0.66 | 48.0 | 5.19e-01 | 90.7% | 90.4% |
| 2l89A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 51.0 | 4.73e-01 | 90.7% | 66.7% |
| 2akkA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.63 | 50.0 | 5.35e-01 | 95.3% | 100.0% |
| 4c0fC00 | 2.30.30.1020 | Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain | 0.60 | 42.0 | 3.89e-01 | 74.4% | 57.1% |
| 4gzvA00 | 2.40.128.490 | Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF14869 family, DUF4488 | 0.55 | 42.0 | 3.62e-01 | 82.6% | 87.1% |
| 1fmbA00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.53 | 35.0 | 3.32e-01 | 80.2% | 54.8% |
| 1wnhA02 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 43.0 | 3.93e-01 | 90.7% | 79.2% |
| 2x8fA02 | 2.40.128.10 | Mainly Beta › Beta Barrel › Lipocalin › | 0.53 | 40.0 | 3.96e-01 | 83.7% | 98.9% |
| 3pnrA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.53 | 45.0 | 3.24e-01 | 93.0% | 90.4% |
| 2mc8A00 | 3.10.450.590 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 42.0 | 3.90e-01 | 89.5% | 94.7% |
| 2y1sA00 | 2.30.60.10 | Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N | 0.52 | 42.0 | 3.89e-01 | 87.2% | 76.9% |
| 2c4mA01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.51 | 40.0 | 2.57e-01 | 87.2% | 82.6% |
| 2vq9A00 | 3.10.130.10 | Alpha Beta › Roll › P-30 Protein › Ribonuclease A-like domain | 0.51 | 37.0 | 3.40e-01 | 80.2% | 95.9% |
| 4w9rB01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.50 | 37.0 | 2.67e-01 | 77.9% | 86.1% |
| 2crfA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.50 | 38.0 | 3.39e-01 | 81.4% | 72.8% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2157301 | 4.1.1.78 ↗ | beta barrels › SH3 › SH3 › SH3 › TTD | 0.75 | 58.0 | 6.23e-01 | 95.3% | 95.9% |
| 3750522 | 4.1.1.218 ↗ | beta barrels › SH3 › SH3 › SH3 › PWP3A-B_N | 0.74 | 52.0 | 4.75e-01 | 77.9% | 56.4% |
| 3557649 | 4.8.1.20 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › PWP3A-B_N | 0.73 | 52.0 | 4.87e-01 | 81.4% | 61.0% |
| 3482706 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 58.0 | 4.63e-01 | 91.9% | 96.5% |
| 4997059 | 4.1.1.139 ↗ | beta barrels › SH3 › SH3 › SH3 › IF5A-like_N | 0.67 | 51.0 | 5.39e-01 | 86.0% | 92.0% |
| 3287628 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 47.0 | 5.35e-01 | 74.4% | 100.0% |
| 3297966 | 4.25.1.2 ↗ | beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain › BRWD_AD | 0.65 | 55.0 | 4.88e-01 | 90.7% | 90.0% |
| 3676628 | 4.1.1.162 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF502 | 0.65 | 49.0 | 4.31e-01 | 77.9% | 70.0% |
| 3465486 | 4.25.1.0 ↗ | beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain | 0.64 | 55.0 | 4.34e-01 | 94.2% | 97.1% |
| 3997130 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 55.0 | 5.26e-01 | 93.0% | 92.0% |
| 3447797 | 4.25.1.0 ↗ | beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain | 0.63 | 57.0 | 4.70e-01 | 98.8% | 97.3% |
| 3645842 | 4.1.1.162 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF502 | 0.63 | 47.0 | 4.91e-01 | 77.9% | 85.0% |
| 3464303 | 4.25.1.0 ↗ | beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain | 0.63 | 56.0 | 4.59e-01 | 97.7% | 100.0% |
| 3219409 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 51.0 | 5.02e-01 | 84.9% | 92.2% |
| 3372371 | 4.25.1.0 ↗ | beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain | 0.63 | 56.0 | 4.69e-01 | 100.0% | 95.3% |
| 4941652 | 4.23.1.2 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 | 0.63 | 50.0 | 4.39e-01 | 86.0% | 68.8% |
| 3802808 | 4.23.1.2 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 | 0.61 | 49.0 | 4.11e-01 | 86.0% | 72.4% |
| 3708407 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.61 | 50.0 | 5.09e-01 | 86.0% | 100.0% |
| 4013811 | 4.8.1.22 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF7025 | 0.61 | 51.0 | 5.06e-01 | 91.9% | 96.7% |
| 5058724 | 4.23.1.2 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 | 0.60 | 48.0 | 4.26e-01 | 86.0% | 68.8% |
| 3414877 | 4.27.1.1 ↗ | beta barrels › SH3 › Mitoribosomal protein mS34 › Mitoribosomal protein mS34 › MRP-S34 | 0.60 | 48.0 | 4.08e-01 | 89.5% | 56.0% |
| 5048974 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 45.0 | 4.21e-01 | 86.0% | 64.5% |
| 3230100 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.58 | 36.0 | 4.21e-01 | 79.1% | 96.4% |
| 3662009 | 4.25.1.0 ↗ | beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain | 0.57 | 49.0 | 4.29e-01 | 98.8% | 99.3% |
| 3584922 | 5.1.4.39 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC4_WD40 | 0.57 | 45.0 | 3.30e-01 | 88.4% | 51.6% |
| 3757490 | 4.1.1.248 ↗ | beta barrels › SH3 › SH3 › SH3 › CABIT | 0.56 | 45.0 | 4.41e-01 | 88.4% | 90.5% |
| 4024702 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.56 | 46.0 | 3.29e-01 | 89.5% | 85.9% |
| 3359021 | 5.1.5.86 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Kelch_1 | 0.55 | 46.0 | 3.07e-01 | 90.7% | 62.0% |
| 3967986 | 4.7.1.2 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › ROF | 0.55 | 45.0 | 4.63e-01 | 89.5% | 96.2% |
| 3713548 | 330.1.1.22 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › PF26536 | 0.54 | 42.0 | 3.85e-01 | 83.7% | 94.8% |
| 4028467 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.53 | 40.0 | 2.82e-01 | 80.2% | 80.0% |
| 3435224 | 243.3.1.19 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3615 | 0.53 | 37.0 | 4.08e-01 | 83.7% | 100.0% |
| 3264373 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.52 | 39.0 | 2.77e-01 | 81.4% | 83.4% |
| 222987 | 9.24.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › hypothetical protein BACOVA_00364 › hypothetical protein BACOVA_00364 › DUF4488 | 0.52 | 42.0 | 3.64e-01 | 89.5% | 86.6% |
| 3947887 | 283.2.1.9 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Sheath_initiator | 0.52 | 37.0 | 3.41e-01 | 75.6% | 69.6% |
| 3626173 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 39.0 | 2.69e-01 | 84.9% | 38.2% |