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MH059633.1__AWD92464.1__X__00069

Bact-Vir

MH059633.1__AWD92464.1__X__00069

Identity

Accession:
MH059633 ↗
Kingdom:
phage

Quality

77.8 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-62
PDB
Domain cluster: representative
CATH (61)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2giaA00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.78 71.0 5.19e-01 100.0% 42.9%
1yprA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.76 49.0 3.80e-01 72.1% 32.0%
4a18P00 3.30.720.90 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.68 43.0 4.24e-01 72.1% 59.1%
2lezA00 3.30.2450.10 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › Secreted effector protein pipB2 0.68 55.0 4.50e-01 91.8% 49.2%
3bpqD00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.68 47.0 4.27e-01 83.6% 52.3%
2n54B00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.67 47.0 4.58e-01 85.2% 66.7%
2nvnA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.67 54.0 4.32e-01 100.0% 45.0%
1vr8A00 3.40.1000.20 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › TM1622-like 0.67 44.0 3.34e-01 72.1% 30.4%
2it9A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.66 55.0 4.40e-01 100.0% 46.7%
1p6pA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.65 48.0 3.88e-01 80.3% 79.2%
6j9eJ00 3.30.160.560 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.65 47.0 4.62e-01 83.6% 71.2%
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.65 53.0 4.07e-01 90.2% 40.7%
1lfoA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.65 50.0 3.97e-01 85.2% 78.7%
3picA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.64 50.0 3.08e-01 83.6% 78.5%
1skoA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.64 42.0 3.36e-01 70.5% 34.5%
1vpkA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.63 47.0 3.71e-01 80.3% 69.5%
1vyfA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.63 50.0 3.86e-01 85.2% 77.8%
3cm1A00 2.30.31.20 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB 0.63 54.0 4.25e-01 100.0% 44.9%
3p91A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.63 51.0 3.42e-01 90.2% 78.0%
6c1zA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.63 49.0 3.80e-01 85.2% 76.8%
4m7xA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.63 43.0 3.80e-01 72.1% 65.9%
1cbiA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.63 47.0 3.73e-01 83.6% 86.0%
1aqcB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 48.0 3.85e-01 85.2% 90.2%
4azpA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.61 48.0 3.75e-01 85.2% 76.1%
1e8oA00 3.30.720.10 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 0.61 42.0 4.00e-01 72.1% 67.6%
1fu1A01 2.170.210.10 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › DNA double-strand break repair and VJ recombination XRCC4, N-terminal 0.61 52.0 4.19e-01 95.1% 83.9%
6ptrB01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.61 45.0 3.71e-01 80.3% 72.6%
3p0cA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.61 44.0 3.65e-01 77.0% 45.9%
5w7zA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.61 46.0 3.77e-01 82.0% 67.3%
2qmiA02 2.40.128.210 Mainly Beta › Beta Barrel › Lipocalin › Pab87 octamerisation domain 0.61 47.0 4.01e-01 85.2% 65.0%
6ap4B02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.60 47.0 3.61e-01 85.2% 70.2%
3kyeA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.58 49.0 3.87e-01 100.0% 46.2%
7ct3A01 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.58 41.0 3.31e-01 77.0% 38.5%
3k6qA02 3.30.160.620 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.58 43.0 3.72e-01 77.0% 52.8%
4e5xG00 2.60.40.3530 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 42.0 3.61e-01 77.0% 63.6%
7yh1A01 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.58 45.0 3.69e-01 100.0% 45.6%
3pweA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.58 48.0 3.82e-01 91.8% 85.4%
7nn3B01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.58 46.0 2.96e-01 91.8% 82.9%
1yqfB00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.57 50.0 3.59e-01 98.4% 58.8%
4fr9A00 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 41.0 3.17e-01 78.7% 33.3%
3dxpA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 38.0 3.36e-01 72.1% 75.3%
3pieC05 2.170.260.40 Mainly Beta › Beta Complex › paz domain › 0.56 46.0 3.52e-01 98.4% 45.5%
2ix2B00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.56 49.0 3.29e-01 100.0% 98.4%
6nrzA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 40.0 3.02e-01 78.7% 63.9%
2kheA00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.55 38.0 3.48e-01 78.7% 51.7%
6h5bB01 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.55 46.0 3.66e-01 100.0% 47.1%
5agvA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.55 48.0 3.82e-01 100.0% 98.4%
3u12A00 2.30.29.180 Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain 0.55 42.0 3.67e-01 90.2% 59.6%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 39.0 4.07e-01 78.7% 87.7%
4ghnA02 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.53 39.0 3.40e-01 83.6% 93.3%
4hbrA00 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 40.0 3.27e-01 91.8% 77.9%
1h10A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 47.0 3.78e-01 100.0% 87.2%
4hntA04 3.10.600.10 Alpha Beta › Roll › pyruvate carboxylase f1077a mutant fold › pyruvate carboxylase f1077a mutant domain 0.52 38.0 3.38e-01 83.6% 86.1%
1p9rA01 3.30.450.90 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.52 39.0 3.28e-01 82.0% 54.1%
2dixA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.51 37.0 3.40e-01 75.4% 66.7%
4p6zM01 3.30.450.60 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.51 43.0 3.50e-01 95.1% 69.4%
3a54A01 2.40.50.340 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.51 39.0 3.55e-01 86.9% 90.0%
1fo0B00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 36.0 3.10e-01 78.7% 65.2%
3fehA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 47.0 3.63e-01 100.0% 80.6%
1ifqB00 3.30.450.50 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin domain 0.50 40.0 3.23e-01 90.2% 72.7%
4joiA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.50 43.0 3.37e-01 100.0% 63.1%
ECOD (61)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3783719 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.74 44.0 3.47e-01 70.5% 30.0%
5061930 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.72 46.0 3.97e-01 85.2% 42.1%
5081796 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.70 52.0 3.80e-01 82.0% 28.8%
4188283 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.70 46.0 4.20e-01 73.8% 51.2%
4027723 252.2.1.0 a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.69 51.0 4.87e-01 78.7% 74.3%
4116346 3675.1.1.0 a+b complex topology › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain 0.68 57.0 4.29e-01 96.7% 43.8%
3385764 4954.1.1.0 a+b complex topology › central helical domain in RNA-polymerase beta-prime subunit › central helical domain in RNA-polymerase beta-prime subunit › central helical domain in RNA-polymerase beta-prime subunit 0.68 45.0 4.18e-01 70.5% 54.7%
5000498 896.1.1.1 a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Ribosomal_L38e 0.68 42.0 4.25e-01 70.5% 63.3%
4963351 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 45.0 3.60e-01 85.2% 36.7%
4034138 7520.1.1.0 a/b three-layered sandwiches › CinA-like › CinA-like › CinA-like 0.65 49.0 3.78e-01 80.3% 70.7%
3714703 1021.1.1.0 a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases 0.65 53.0 4.52e-01 93.4% 55.0%
4870694 7579.1.1.49 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › GCE_fung 0.64 50.0 3.16e-01 83.6% 89.6%
4933539 2484.1.1.302 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB 0.64 46.0 3.16e-01 77.0% 62.8%
4029445 252.2.1.1 a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 0.63 43.0 4.51e-01 78.7% 78.2%
4108829 2484.1.1.144 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DEDD_Tnp_IS110 0.63 45.0 3.61e-01 75.4% 60.8%
4029439 252.2.1.0 a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.63 42.0 4.06e-01 78.7% 60.9%
3925891 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 47.0 4.14e-01 91.8% 54.4%
3980114 3860.1.1.158 alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm › ThrE 0.62 51.0 3.82e-01 90.2% 40.0%
4952060 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.62 42.0 4.26e-01 70.5% 88.3%
4080507 2484.1.1.37 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase 0.61 42.0 3.43e-01 72.1% 59.1%
3241311 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.61 46.0 3.25e-01 80.3% 47.9%
3490881 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.61 46.0 3.59e-01 100.0% 39.5%
4249934 2484.1.1.37 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase 0.60 43.0 3.46e-01 77.0% 65.0%
5061635 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.60 49.0 2.85e-01 90.2% 14.9%
4562380 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.59 41.0 3.03e-01 72.1% 54.5%
3931122 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 43.0 3.69e-01 75.4% 62.1%
4600223 616.1.1.33 alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › UPF0262 0.59 50.0 3.89e-01 98.4% 71.0%
5077254 2004.1.1.42 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE 0.58 47.0 2.79e-01 88.5% 36.3%
4995609 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.58 50.0 3.81e-01 95.1% 95.9%
4026302 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.58 51.0 3.87e-01 98.4% 89.7%
5015520 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.58 50.0 3.50e-01 100.0% 47.6%
3265225 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.57 52.0 3.23e-01 100.0% 22.2%
5047185 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.57 44.0 3.42e-01 83.6% 95.5%
5060970 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.57 50.0 3.96e-01 96.7% 100.0%
4960515 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.56 44.0 3.59e-01 100.0% 45.2%
3201557 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.56 50.0 3.46e-01 100.0% 90.0%
3405538 219.1.1.111 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core, Rad4 0.56 44.0 2.87e-01 88.5% 44.7%
4030681 252.2.1.1 a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 0.56 39.0 3.90e-01 78.7% 70.8%
3227590 2484.1.1.200 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH 0.56 41.0 3.15e-01 78.7% 53.1%
4978622 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.55 45.0 3.89e-01 91.8% 87.0%
3834262 223.2.1.15 a+b three layers › Profilin-like › profilin-like › profilin-like › Longin 0.55 50.0 3.79e-01 100.0% 67.1%
5064298 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.55 44.0 3.55e-01 100.0% 46.1%
222713 391.1.1.1 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › fn1 0.54 35.0 3.91e-01 73.8% 86.7%
5074455 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.54 44.0 3.67e-01 91.8% 82.7%
5072371 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.54 44.0 3.75e-01 91.8% 92.0%
5045350 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 43.0 3.41e-01 91.8% 73.1%
4944923 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 43.0 3.43e-01 91.8% 71.5%
4964910 300.1.1.25 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › TbsP_N 0.53 44.0 3.50e-01 96.7% 89.3%
4927211 223.2.1.62 a+b three layers › Profilin-like › profilin-like › profilin-like › DUF6659 0.53 46.0 3.75e-01 100.0% 52.5%
4947581 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 44.0 3.64e-01 93.4% 80.9%
5077660 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 45.0 3.41e-01 95.1% 65.3%
3519046 223.2.1.33 a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_3 0.52 44.0 3.62e-01 96.7% 86.7%
5048941 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.52 43.0 3.78e-01 96.7% 81.0%
3929366 220.1.1.7 beta barrels › PH domain-like › PH domain-like › PH domain-like › IRS 0.52 41.0 3.45e-01 86.9% 51.4%
5045959 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 43.0 3.56e-01 93.4% 84.5%
5063657 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.51 46.0 3.62e-01 98.4% 51.3%
5079671 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 42.0 3.48e-01 93.4% 84.5%
3925335 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 44.0 3.44e-01 100.0% 46.4%
4136386 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.50 44.0 3.16e-01 95.1% 75.3%
5044629 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.50 41.0 3.35e-01 90.2% 80.0%
4002901 223.2.1.12 a+b three layers › Profilin-like › profilin-like › profilin-like › MAPKK1_Int 0.50 43.0 3.25e-01 98.4% 40.7%