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MH059635.1__AWD90263.1__X__00015
Bact-VirMH059635.1__AWD90263.1__X__00015
Identity
- Accession:
- MH059635 ↗
- Kingdom:
- phage
Quality
79.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 16-66
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ekgA00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.70 | 53.0 | 4.08e-01 | 84.3% | 81.5% |
| 5jy6B01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.64 | 49.0 | 3.46e-01 | 86.3% | 85.8% |
| 3k4iA01 | 3.50.30.40 | Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › Ribonuclease E inhibitor RraA/RraA-like | 0.64 | 53.0 | 3.85e-01 | 100.0% | 74.5% |
| 2x5jQ01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.62 | 50.0 | 3.50e-01 | 92.2% | 87.8% |
| 2ch5B02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.60 | 33.0 | 2.18e-01 | 100.0% | 12.5% |
| 1tg0A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.58 | 44.0 | 4.08e-01 | 100.0% | 63.6% |
| 1e5pA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.58 | 42.0 | 3.14e-01 | 78.4% | 95.3% |
| 6grrB01 | 3.30.457.10 | Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › Copper amine oxidase-like, N-terminal domain | 0.58 | 45.0 | 4.02e-01 | 90.2% | 96.2% |
| 4oddA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.57 | 40.0 | 2.96e-01 | 76.5% | 94.0% |
| 3p2hA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 45.0 | 3.15e-01 | 100.0% | 37.0% |
| 4py5A01 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.53 | 41.0 | 3.78e-01 | 90.2% | 80.6% |
| 2p62A01 | 3.40.50.10620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › PH0156-like domains | 0.53 | 40.0 | 3.08e-01 | 92.2% | 95.9% |
| 5gxuB01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.53 | 38.0 | 2.89e-01 | 78.4% | 68.9% |
| 4kcaA02 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.52 | 39.0 | 2.45e-01 | 88.2% | 99.7% |
| 1oe8A01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.52 | 45.0 | 3.92e-01 | 100.0% | 81.2% |
| 3k3sH01 | 2.30.130.110 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › | 0.51 | 45.0 | 3.87e-01 | 100.0% | 80.5% |
| 3mnfA00 | 3.40.50.10900 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › PAC-like subunit | 0.51 | 37.0 | 2.53e-01 | 84.3% | 86.4% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3492556 | 3006.1.1.3 ↗ | a+b two layers › Sm-Like archaeal protein Smap3, C-terminal domain › Sm-Like archaeal protein Smap3, C-terminal domain › Sm-Like archaeal protein Smap3, C-terminal domain › AD | 0.71 | 58.0 | 5.34e-01 | 90.2% | 92.3% |
| 3761880 | 356.1.1.0 ↗ | few secondary structure elements › PMP inhibitors › PMP inhibitors › PMP inhibitors | 0.65 | 35.0 | 3.86e-01 | 98.0% | 96.0% |
| 5049075 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.62 | 54.0 | 3.71e-01 | 100.0% | 72.8% |
| 4937917 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.62 | 53.0 | 5.39e-01 | 100.0% | 98.0% |
| 3370535 | 5.3.1.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II | 0.58 | 48.0 | 3.71e-01 | 98.0% | 89.6% |
| 4000532 | 2.1.1.81 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rrp44_S1 | 0.57 | 48.0 | 4.12e-01 | 98.0% | 92.9% |
| 3593539 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.57 | 36.0 | 2.33e-01 | 100.0% | 12.7% |
| 3953557 | 210.1.3.3 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 | 0.56 | 49.0 | 3.09e-01 | 100.0% | 30.4% |
| 4223216 | 214.1.1.7 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2_1 | 0.54 | 41.0 | 3.18e-01 | 88.2% | 76.9% |
| 3810129 | 376.1.2.2 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 | 0.53 | 41.0 | 3.86e-01 | 100.0% | 69.2% |
| 5060937 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.52 | 45.0 | 4.02e-01 | 100.0% | 74.7% |
| 4563194 | 274.1.1.40 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › 17kDa_Anti_2 | 0.52 | 44.0 | 3.65e-01 | 98.0% | 80.9% |
| 4992030 | 632.1.1.40 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › DUF3536 | 0.51 | 42.0 | 2.89e-01 | 98.0% | 29.3% |
| 3968543 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.51 | 39.0 | 2.92e-01 | 90.2% | 68.7% |