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MH059636.2__AWD90346.1__X__00198
Bact-VirMH059636.2__AWD90346.1__X__00198
Identity
- Accession:
- MH059636 ↗
- Kingdom:
- phage
Quality
76.7
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Risoevirus›
Erwinia_phage_Cronus
TaxID: 2163633
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-72
Domain cluster:
representative
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1zu4A01 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.72 | 62.0 | 5.88e-01 | 100.0% | 87.4% |
| 4cbeA00 | 1.20.120.1640 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.68 | 59.0 | 4.30e-01 | 100.0% | 98.1% |
| 3h20A04 | 1.10.1240.50 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › | 0.66 | 48.0 | 4.51e-01 | 78.6% | 64.0% |
| 4adnA01 | 1.20.1280.250 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.66 | 57.0 | 5.41e-01 | 100.0% | 85.9% |
| 1abvA00 | 1.10.520.20 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0.65 | 56.0 | 4.95e-01 | 97.1% | 68.6% |
| 2c5uA02 | 1.10.3550.20 | Mainly Alpha › Orthogonal Bundle › eoxyguanosinetriphosphate triphosphohydrolase fold › | 0.65 | 54.0 | 4.45e-01 | 100.0% | 50.4% |
| 4g12A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.65 | 55.0 | 4.41e-01 | 100.0% | 76.5% |
| 3tixA02 | 6.10.140.1690 | Special › Helix non-globular › Helix Hairpins › | 0.64 | 43.0 | 4.17e-01 | 70.0% | 91.1% |
| 3v2lA00 | 1.10.238.20 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain | 0.64 | 55.0 | 4.65e-01 | 97.1% | 94.2% |
| 6vvoE02 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.64 | 52.0 | 4.75e-01 | 95.7% | 82.8% |
| 1a41A02 | 1.20.120.380 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Type 1-topoisomerase catalytic fragment, domain 2 | 0.64 | 54.0 | 5.02e-01 | 100.0% | 94.7% |
| 1w0bA01 | 1.20.58.420 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › AHSP | 0.63 | 47.0 | 4.35e-01 | 81.4% | 84.8% |
| 7p2yd01 | 1.10.520.20 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0.62 | 52.0 | 4.73e-01 | 97.1% | 72.7% |
| 1nklA00 | 1.10.225.10 | Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like | 0.61 | 51.0 | 4.98e-01 | 98.6% | 96.2% |
| 1dgfA03 | 1.20.1370.60 | Mainly Alpha › Up-down Bundle › Hemocyanin, N-terminal domain › | 0.60 | 44.0 | 3.82e-01 | 78.6% | 78.9% |
| 3umgA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.60 | 43.0 | 4.37e-01 | 77.1% | 97.2% |
| 1dowA00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.60 | 50.0 | 3.76e-01 | 100.0% | 52.7% |
| 6ko8A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.60 | 51.0 | 3.87e-01 | 100.0% | 59.5% |
| 2wtbA01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.60 | 52.0 | 3.47e-01 | 98.6% | 79.9% |
| 4d7rA01 | 1.10.220.20 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › | 0.58 | 40.0 | 3.89e-01 | 78.6% | 63.4% |
| 4nqiD00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.57 | 41.0 | 2.92e-01 | 77.1% | 75.4% |
| 1t3qA02 | 1.10.150.120 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › [2Fe-2S]-binding domain | 0.57 | 43.0 | 4.12e-01 | 81.4% | 74.1% |
| 8jpdG01 | 1.10.167.10 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 | 0.56 | 46.0 | 3.81e-01 | 98.6% | 53.1% |
| 3jsbA01 | 1.20.1440.300 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › RNA-directed RNA polymerase L, helical domain | 0.56 | 39.0 | 3.82e-01 | 75.7% | 69.1% |
| 1ussA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 40.0 | 3.79e-01 | 80.0% | 71.6% |
| 3cx5A02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.54 | 41.0 | 2.95e-01 | 82.9% | 70.0% |
| 7eu3E01 | 1.10.287.3510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.53 | 36.0 | 3.45e-01 | 72.9% | 85.1% |
| 3ol4A02 | 1.10.10.2390 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.52 | 37.0 | 3.89e-01 | 78.6% | 90.0% |
| 3ln6A01 | 3.30.590.20 | Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › | 0.52 | 43.0 | 2.76e-01 | 98.6% | 90.7% |
| 4z4qA04 | 1.10.268.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase; domain 3 › Topoisomerase, domain 3 | 0.52 | 41.0 | 3.82e-01 | 95.7% | 68.5% |
| 4kw3A00 | 3.40.1310.20 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.51 | 37.0 | 2.62e-01 | 80.0% | 58.3% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4973815 | 3896.1.2.0 ↗ | alpha duplicates or obligate multimers › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-archaeol synthase | 0.79 | 68.0 | 5.29e-01 | 95.7% | 89.3% |
| 4431870 | 108.1.1.8 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › S_100 | 0.77 | 68.0 | 6.33e-01 | 100.0% | 94.4% |
| 3757706 | 198.1.1.7 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapA | 0.71 | 62.0 | 5.39e-01 | 100.0% | 72.7% |
| 4950149 | 3896.1.2.0 ↗ | alpha duplicates or obligate multimers › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-archaeol synthase | 0.70 | 60.0 | 4.59e-01 | 98.6% | 91.4% |
| 3877309 | 198.1.1.3 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_1 | 0.70 | 61.0 | 5.68e-01 | 100.0% | 88.9% |
| 4264669 | 563.1.1.1 ↗ | alpha bundles › ATPD N-terminal domain-like › N-terminal domain of the delta subunit of the F1F0-ATP synthase › N-terminal domain of the delta subunit of the F1F0-ATP synthase › OSCP | 0.70 | 61.0 | 4.55e-01 | 97.1% | 42.3% |
| 4426593 | 563.1.1.1 ↗ | alpha bundles › ATPD N-terminal domain-like › N-terminal domain of the delta subunit of the F1F0-ATP synthase › N-terminal domain of the delta subunit of the F1F0-ATP synthase › OSCP | 0.69 | 61.0 | 4.60e-01 | 100.0% | 41.2% |
| 3568853 | 198.1.1.23 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapA, SapB_1 | 0.68 | 58.0 | 5.06e-01 | 100.0% | 69.6% |
| 3286911 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 50.0 | 5.05e-01 | 81.4% | 92.9% |
| 5078313 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.65 | 45.0 | 3.24e-01 | 72.9% | 32.2% |
| None | — | 0.65 | 50.0 | 3.34e-01 | 84.3% | 47.0% | |
| 3922156 | 5067.1.1.3 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Patched | 0.64 | 49.0 | 3.80e-01 | 82.9% | 63.9% |
| 4927881 | 601.18.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Oxygen-evolving enhancer protein 3 › Oxygen-evolving enhancer protein 3 | 0.64 | 55.0 | 5.11e-01 | 100.0% | 93.3% |
| 3365262 | 109.4.1.1424 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, PPR_3, TPR_24 | 0.64 | 53.0 | 3.69e-01 | 98.6% | 26.4% |
| 3346181 | 109.4.1.1257 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2 | 0.64 | 52.0 | 4.53e-01 | 97.1% | 57.4% |
| 3449859 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.62 | 43.0 | 3.38e-01 | 72.9% | 32.9% |
| 4541844 | 2004.1.1.412 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AddB_5th | 0.62 | 52.0 | 3.28e-01 | 100.0% | 45.1% |
| 4039500 | 7014.1.1.1 ↗ | alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › BacA | 0.60 | 50.0 | 4.24e-01 | 95.7% | 66.4% |
| 4020945 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.60 | 43.0 | 4.21e-01 | 75.7% | 76.0% |
| 3707908 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.58 | 48.0 | 4.29e-01 | 100.0% | 70.9% |
| 4214506 | 101.35.1.0 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX | 0.56 | 40.0 | 4.38e-01 | 94.3% | 98.2% |
| 4674000 | 7014.1.1.1 ↗ | alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › BacA | 0.56 | 46.0 | 3.76e-01 | 92.9% | 64.7% |
| 4957898 | 191.1.1.63 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_N | 0.56 | 46.0 | 3.51e-01 | 100.0% | 59.5% |
| 4559285 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.56 | 34.0 | 3.23e-01 | 90.0% | 47.8% |
| 3715143 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 39.0 | 3.78e-01 | 92.9% | 66.3% |
| 3850399 | 3788.1.1.13 ↗ | alpha bundles › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) › DMAP_binding | 0.54 | 47.0 | 4.41e-01 | 100.0% | 91.1% |
| 3755193 | 4146.1.1.7 ↗ | alpha bundles › YqgQ-like › YqgQ-like › YqgQ-like › DMAP_binding | 0.54 | 47.0 | 4.57e-01 | 98.6% | 98.8% |
| 3908235 | 108.1.1.148 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › DMAP_binding | 0.54 | 47.0 | 4.48e-01 | 95.7% | 96.2% |
| 3178558 | 101.1.17.44 ↗ | alpha arrays › HTH › HTH › FF domain › PF26804 | 0.54 | 39.0 | 3.78e-01 | 78.6% | 80.0% |
| 5079266 | 109.4.1.210 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_19 | 0.54 | 45.0 | 3.71e-01 | 98.6% | 71.4% |
| 3281517 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.50 | 38.0 | 2.99e-01 | 87.1% | 35.0% |