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MH059636.2AWD90353.1X__00205

Bact-Vir

MH059636.2__AWD90353.1__X__00205

Identity

Accession:: MH059636 ↗
Kingdom:: phage

Quality

93.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Straboviridae› Risoevirus› Erwinia_phage_Cronus

TaxID: 2163633

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-77

PDB

Domain cluster: rep: OP380596.1__UYD57924.1__GHHBBDOD_00053__00053__D1-64

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF11110.13 best	Phage_hub_GP28	59.7	4.60e-16	81.2%	35.1%

CATH (10)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4qiwB04	3.90.1110.10	Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2	0.66	46.0	3.59e-01	75.4%	55.8%
3obfA00	3.30.450.40	Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain	0.63	52.0	3.94e-01	92.8%	96.6%
2oh1C00	3.40.630.30	Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT)	0.55	45.0	3.54e-01	98.6%	100.0%
2xryA03	1.10.579.10	Mainly Alpha › Orthogonal Bundle › DNA Cyclobutane Dipyrimidine Photolyase, subunit A; domain 3 › DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3	0.53	40.0	3.23e-01	82.6%	48.2%
3l5kA02	1.10.150.240	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2	0.53	38.0	3.86e-01	91.3%	76.5%
2c42A03	3.40.920.10	Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III	0.52	41.0	2.99e-01	89.9%	49.5%
3h5qA01	1.20.970.10	Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C	0.52	37.0	3.70e-01	82.6%	74.3%
3g2eB00	3.40.920.10	Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III	0.51	41.0	3.13e-01	92.8%	46.5%
4gtnA01	1.20.970.10	Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C	0.51	37.0	3.67e-01	87.0%	73.0%
1dd9A03	1.20.50.20	Mainly Alpha › Up-down Bundle › Pheromone ER-1 › DnaG, RNA polymerase domain, helical bundle	0.51	38.0	4.11e-01	79.7%	93.2%

ECOD (6)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3751351	3796.1.1.0 ↗	alpha arrays › Iron-regulated surface determinant protein H linker domain › Iron-regulated surface determinant protein H linker domain › Iron-regulated surface determinant protein H linker domain	0.62	36.0	3.74e-01	71.0%	61.5%
4656355	101.1.2.8 ↗	alpha arrays › HTH › HTH › winged helix domain › Trans_reg_C	0.57	43.0	3.88e-01	92.8%	58.0%
4970736	3054.1.1.0 ↗	alpha arrays › Insert all-alpha domain in prim-pol › Insert all-alpha domain in prim-pol › Insert all-alpha domain in prim-pol	0.53	40.0	3.82e-01	94.2%	70.0%
2476798	110.1.1.1 ↗	alpha arrays › DEATH domain › DEATH domain › DEATH domain › Death	0.52	43.0	3.68e-01	92.8%	85.2%
3511073	2007.2.3.2 ↗	a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › DSPc	0.52	37.0	2.79e-01	76.8%	70.3%
3839043	2004.1.3.1 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR	0.51	43.0	3.21e-01	94.2%	60.5%

D2 medium residues 90-174

PDB

Domain cluster: rep: NC_027331.1__YP_009146642.1__ACQ46_gp243__00209__D464-523

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF11110.13 best	Phage_hub_GP28	93.0	2.60e-26	100.0%	54.5%