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MH059636.2__AWD90573.1__X__00134

Bact-Vir

MH059636.2__AWD90573.1__X__00134

Identity

Accession:
MH059636 ↗
Kingdom:
phage

Quality

88.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Straboviridae› Risoevirus› Erwinia_phage_Cronus

TaxID: 2163633

Cluster

View cluster (36 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-78
PDB
Domain cluster: rep: OQ079410.1__WCD55429.1__LABOLPEG_00027__00027__D6-77
CATH (39)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4lduA03 2.30.30.1040 Mainly Beta › Roll › SH3 type barrels. › 0.75 51.0 5.37e-01 71.6% 100.0%
4qqgG00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 54.0 5.48e-01 79.7% 95.8%
5zwzA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 50.0 5.14e-01 77.0% 97.1%
2as9B01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.68 50.0 4.52e-01 78.4% 58.4%
3oymA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 51.0 5.23e-01 81.1% 97.1%
2rceA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.67 50.0 4.42e-01 79.7% 59.4%
2lccA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 49.0 4.86e-01 77.0% 92.1%
3pieC09 2.30.30.750 Mainly Beta › Roll › SH3 type barrels. › 0.66 52.0 4.72e-01 85.1% 88.9%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.65 49.0 5.31e-01 82.4% 98.3%
1wczA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.64 48.0 4.16e-01 79.7% 53.9%
2ox7A02 2.30.30.290 Mainly Beta › Roll › SH3 type barrels. › YopX-like domains 0.64 52.0 5.43e-01 89.2% 94.2%
4rudA00 2.10.60.10 Mainly Beta › Ribbon › CD59 › CD59 0.63 37.0 4.05e-01 79.7% 72.4%
2m9uA00 2.30.30.850 Mainly Beta › Roll › SH3 type barrels. › 0.63 47.0 4.43e-01 79.7% 67.4%
2btwA00 3.90.70.30 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Phytochelatin synthase, N-terminal domain 0.63 48.0 3.50e-01 83.8% 45.7%
3agjF01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.63 49.0 4.13e-01 85.1% 85.8%
1ne8A00 2.30.30.110 Mainly Beta › Roll › SH3 type barrels. › 0.63 50.0 4.26e-01 85.1% 81.0%
3a2yA00 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.62 48.0 3.60e-01 83.8% 47.6%
2xzlA02 2.40.30.230 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.60 44.0 4.37e-01 78.4% 100.0%
2a2jA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.59 42.0 3.11e-01 75.7% 76.4%
2vpaA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.59 44.0 3.24e-01 79.7% 36.8%
2gk6A02 2.40.30.230 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.58 44.0 4.23e-01 79.7% 100.0%
4b3fX02 2.40.30.270 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.58 45.0 4.08e-01 82.4% 90.8%
4rdlA02 2.40.30.120 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses 0.58 45.0 4.02e-01 85.1% 99.1%
1ci0B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 44.0 3.25e-01 83.8% 37.7%
3lq6A02 2.40.30.120 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses 0.57 45.0 3.90e-01 83.8% 98.2%
4kc7A02 2.40.128.10 Mainly Beta › Beta Barrel › Lipocalin › 0.57 44.0 4.02e-01 83.8% 100.0%
2p1gA02 2.30.260.10 Mainly Beta › Roll › putative xylanase like fold › putative xylanase like domain 0.57 44.0 3.99e-01 83.8% 94.0%
2x8fA02 2.40.128.10 Mainly Beta › Beta Barrel › Lipocalin › 0.57 43.0 4.01e-01 82.4% 100.0%
2arzA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.56 42.0 3.38e-01 79.7% 45.3%
2gpjA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.55 42.0 3.88e-01 85.1% 77.0%
1n26A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 38.0 3.73e-01 83.8% 67.9%
6mv2A02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.54 41.0 3.75e-01 83.8% 80.0%
1wi1A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 38.0 3.43e-01 75.7% 77.5%
4g1vA02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.53 43.0 3.73e-01 90.5% 78.0%
2dn7A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 37.0 3.35e-01 83.8% 52.3%
4rlzA02 2.40.30.120 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses 0.52 41.0 3.66e-01 87.8% 98.2%
4dohB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 41.0 3.93e-01 87.8% 85.2%
1aqbA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 41.0 3.25e-01 93.2% 93.7%
1xhnA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 39.0 3.10e-01 85.1% 47.6%
ECOD (91)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3559960 2006.1.6.66 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF4537 0.80 63.0 6.50e-01 83.8% 97.1%
3240407 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.76 59.0 6.12e-01 82.4% 97.1%
3553983 4.1.1.233 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.75 55.0 6.03e-01 77.0% 100.0%
3854638 4.1.1.131 ↗ beta barrels › SH3 › SH3 › SH3 › MLVIN_C 0.73 54.0 4.84e-01 85.1% 57.0%
3185321 4.1.1.51 ↗ beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.73 56.0 5.58e-01 81.1% 97.3%
3511551 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 55.0 6.09e-01 79.7% 100.0%
3924375 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.73 58.0 5.80e-01 83.8% 92.0%
3356605 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.73 53.0 4.93e-01 75.7% 87.8%
3703933 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.73 56.0 6.00e-01 81.1% 100.0%
3598285 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 58.0 5.95e-01 83.8% 95.7%
3201878 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 58.0 4.67e-01 86.5% 77.1%
3834112 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.72 53.0 5.17e-01 77.0% 100.0%
3941170 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.72 55.0 5.73e-01 81.1% 95.7%
3554026 4.1.1.233 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.72 55.0 5.98e-01 83.8% 100.0%
3608562 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 55.0 4.29e-01 82.4% 91.2%
3368864 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.71 54.0 5.72e-01 79.7% 98.5%
3414063 4.1.1.233 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.71 51.0 5.73e-01 81.1% 100.0%
4958339 4.11.1.1 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.71 58.0 5.07e-01 87.8% 60.0%
3959465 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.71 54.0 4.45e-01 81.1% 70.0%
3520654 4.1.1.187 ↗ beta barrels › SH3 › SH3 › SH3 › DIRP 0.71 55.0 4.33e-01 82.4% 70.7%
3689576 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 58.0 4.53e-01 89.2% 69.0%
3665882 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.71 55.0 4.45e-01 82.4% 55.6%
3619619 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 54.0 5.61e-01 82.4% 90.0%
3188712 4.1.1.225 ↗ beta barrels › SH3 › SH3 › SH3 › DUF7025 0.70 54.0 4.89e-01 82.4% 91.0%
3587906 4.1.1.46 ↗ beta barrels › SH3 › SH3 › SH3 › VEG 0.70 56.0 5.48e-01 85.1% 88.7%
3938908 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 55.0 5.63e-01 85.1% 88.6%
3928136 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 50.0 5.51e-01 75.7% 100.0%
2756510 4.1.1.131 ↗ beta barrels › SH3 › SH3 › SH3 › MLVIN_C 0.69 52.0 4.94e-01 87.8% 66.3%
4283343 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.69 53.0 5.20e-01 82.4% 98.8%
3457106 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.69 52.0 5.53e-01 79.7% 98.5%
3927795 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 49.0 5.40e-01 74.3% 100.0%
3934192 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 50.0 5.46e-01 77.0% 100.0%
3925589 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 50.0 5.12e-01 75.7% 100.0%
3659671 4.25.1.0 ↗ beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain 0.69 53.0 5.50e-01 85.1% 100.0%
3342814 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.68 53.0 4.85e-01 82.4% 88.4%
3357709 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.68 55.0 5.24e-01 86.5% 88.2%
3494683 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 53.0 5.43e-01 83.8% 95.7%
4319097 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 46.0 5.10e-01 81.1% 91.4%
3342793 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.67 58.0 4.26e-01 94.6% 75.3%
3545090 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.67 50.0 3.57e-01 79.7% 30.0%
3591183 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 52.0 4.67e-01 85.1% 98.1%
3590468 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 52.0 5.39e-01 87.8% 91.4%
3630782 4.1.1.51 ↗ beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.66 58.0 4.68e-01 97.3% 89.0%
4987744 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.66 58.0 4.72e-01 95.9% 57.8%
3772106 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.66 49.0 3.52e-01 79.7% 29.3%
3922426 4.1.1.363 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet, Tudor_FRX1 0.66 55.0 4.67e-01 95.9% 55.8%
3472898 4.1.1.25 ↗ beta barrels › SH3 › SH3 › SH3 › PAZ 0.66 52.0 4.43e-01 85.1% 93.3%
4272564 4.1.1.17 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.66 56.0 4.91e-01 93.2% 90.7%
3941320 4.1.1.303 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus 0.66 56.0 5.63e-01 100.0% 94.7%
3930366 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 50.0 5.48e-01 82.4% 100.0%
3841414 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.65 54.0 5.52e-01 94.6% 94.3%
2755606 4.1.1.17 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.65 58.0 4.11e-01 100.0% 56.1%
3210897 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 52.0 4.96e-01 86.5% 85.9%
3611892 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.65 48.0 3.60e-01 79.7% 32.1%
3459099 4.1.1.158 ↗ beta barrels › SH3 › SH3 › SH3 › DUF3444 0.65 58.0 5.16e-01 98.6% 99.0%
3575581 4.1.1.17 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.65 58.0 4.48e-01 100.0% 80.0%
1503651 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.65 49.0 4.84e-01 82.4% 82.5%
3514556 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 51.0 5.27e-01 85.1% 91.4%
3930643 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 49.0 5.31e-01 87.8% 100.0%
3719164 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.64 48.0 3.57e-01 79.7% 32.1%
3935101 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 51.0 5.37e-01 86.5% 98.5%
4251101 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 51.0 4.86e-01 85.1% 91.8%
3601993 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.64 47.0 3.52e-01 79.7% 30.8%
4271087 4.1.1.444 ↗ beta barrels › SH3 › SH3 › SH3 › SplA 0.64 45.0 4.65e-01 75.7% 81.4%
4121830 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.63 49.0 4.49e-01 85.1% 100.0%
3247934 1.1.7.41 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › UPF1_1B_dom 0.63 48.0 4.40e-01 81.1% 97.9%
4069560 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 48.0 4.82e-01 83.8% 100.0%
3719783 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 49.0 4.60e-01 86.5% 92.6%
3711953 1.1.7.7 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.62 47.0 4.07e-01 81.1% 94.8%
4937587 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.62 46.0 3.67e-01 82.4% 50.9%
4210485 4.1.1.303 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus 0.62 48.0 5.08e-01 90.5% 96.9%
3696482 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 46.0 4.38e-01 82.4% 67.4%
3912956 4.1.1.56 ↗ beta barrels › SH3 › SH3 › SH3 › RBB1NT 0.61 54.0 4.60e-01 98.6% 70.8%
3615787 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.60 45.0 3.20e-01 79.7% 28.4%
5002155 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.60 48.0 4.38e-01 87.8% 70.0%
3744112 1.1.7.7 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.60 45.0 4.02e-01 82.4% 97.3%
3615287 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.60 47.0 4.23e-01 86.5% 78.1%
5052232 2498.1.1.0 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.59 42.0 2.70e-01 74.3% 38.8%
4319764 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.58 45.0 3.94e-01 82.4% 66.4%
4430197 382.1.1.0 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.58 33.0 3.66e-01 71.6% 72.7%
4012379 4.18.1.1 ↗ beta barrels › SH3 › Plus3 › Plus3 › Plus-3 0.58 46.0 3.97e-01 85.1% 76.5%
4625654 4.1.1.445 ↗ beta barrels › SH3 › SH3 › SH3 › Spore_GerQ 0.58 45.0 4.49e-01 85.1% 90.7%
4085589 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.57 45.0 4.46e-01 87.8% 100.0%
4929404 1.1.7.7 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.56 44.0 3.94e-01 86.5% 73.3%
4181458 1.1.7.7 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.55 42.0 3.75e-01 83.8% 95.5%
3354076 4.1.1.330 ↗ beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O, SH3-C_UBE2O 0.55 46.0 3.98e-01 100.0% 94.6%
3212847 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.55 40.0 2.99e-01 79.7% 28.8%
4429352 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.54 44.0 4.12e-01 87.8% 91.1%
3632407 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 43.0 3.76e-01 89.2% 84.6%
3587296 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 41.0 3.45e-01 89.2% 85.4%
3956579 11.1.1.949 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF28476 0.51 39.0 3.31e-01 85.1% 77.8%