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MH115576.1__AWD93187.1__AM106_67__00067
Bact-VirMH115576.1__AWD93187.1__AM106_67__00067
Identity
- Accession:
- MH115576 ↗
- Kingdom:
- phage
Quality
77.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-46
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3pxvB00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.61 | 50.0 | 3.29e-01 | 97.5% | 87.3% |
| 1peqA03 | 1.10.1650.20 | Mainly Alpha › Orthogonal Bundle › 50s Ribosomal Protein L19e, Chain O, domain 1 › | 0.56 | 42.0 | 4.05e-01 | 100.0% | 79.2% |
| 3v7iA01 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.56 | 37.0 | 2.47e-01 | 72.5% | 15.8% |
| 7zn6A01 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.56 | 39.0 | 2.53e-01 | 100.0% | 13.7% |
| 1tkeA03 | 3.30.54.20 | Alpha Beta › 2-Layer Sandwich › Replication Terminator Protein; Chain A, domain 2 › | 0.55 | 41.0 | 3.71e-01 | 82.5% | 65.5% |
| 1crnA00 | 3.30.1350.10 | Alpha Beta › 2-Layer Sandwich › Crambin › Thionin-like | 0.55 | 40.0 | 4.01e-01 | 95.0% | 82.6% |
| 1sdoA00 | 3.40.91.20 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.54 | 41.0 | 2.84e-01 | 100.0% | 100.0% |
| 3gwfA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.53 | 40.0 | 2.59e-01 | 95.0% | 52.1% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3970641 | 268.1.1.0 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related | 0.78 | 65.0 | 4.66e-01 | 100.0% | 32.5% |
| 4245376 | 3933.1.1.1 ↗ | a+b two layers › Uncharacterized protein YPO2434 › Uncharacterized protein YPO2434 › Uncharacterized protein YPO2434 › KTSC | 0.76 | 66.0 | 5.76e-01 | 100.0% | 65.0% |
| 5003301 | 268.1.1.0 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related | 0.73 | 61.0 | 4.60e-01 | 100.0% | 77.1% |
| 4952218 | 3933.1.1.1 ↗ | a+b two layers › Uncharacterized protein YPO2434 › Uncharacterized protein YPO2434 › Uncharacterized protein YPO2434 › KTSC | 0.72 | 59.0 | 5.30e-01 | 100.0% | 65.0% |
| 3194036 | 268.1.1.0 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related | 0.70 | 54.0 | 3.85e-01 | 97.5% | 26.0% |
| 2814862 | 268.1.1.9 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related › DUF7884 | 0.67 | 52.0 | 4.75e-01 | 100.0% | 63.8% |
| 3937650 | 221.1.1.6 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA | 0.66 | 52.0 | 3.83e-01 | 100.0% | 31.7% |
| 3283518 | 2003.1.5.21 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › CMAS | 0.65 | 47.0 | 2.89e-01 | 80.0% | 80.4% |
| 3575059 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 46.0 | 4.00e-01 | 100.0% | 45.3% |
| 4007102 | 618.1.1.1 ↗ | a+b complex topology › DNA mimic protein DMP12-like › DNA mimic protein DMP12-related › DNA mimic protein DMP12-related › DUF1877 | 0.59 | 46.0 | 3.26e-01 | 100.0% | 26.1% |
| 4488850 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.58 | 40.0 | 3.07e-01 | 75.0% | 63.0% |
| 5053822 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.57 | 48.0 | 3.43e-01 | 100.0% | 51.5% |
| 4154336 | 865.1.1.0 ↗ | beta complex topology › PheT/TilS domain › PheT/TilS domain › PheT/TilS domain | 0.57 | 45.0 | 3.55e-01 | 100.0% | 82.0% |
| 3949988 | 7581.1.1.19 ↗ | a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › Thiolase_N+Thiolase_C | 0.56 | 43.0 | 2.52e-01 | 95.0% | 23.7% |
| 4932601 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.56 | 40.0 | 3.30e-01 | 77.5% | 80.0% |
| 4643653 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 40.0 | 3.46e-01 | 82.5% | 90.0% |
| 5057812 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.55 | 42.0 | 3.54e-01 | 87.5% | 80.0% |
| 2388501 | 11.1.4.30 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › GramPos_pilinD1 | 0.54 | 43.0 | 3.11e-01 | 100.0% | 83.6% |
| 3929065 | 872.1.1.0 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like | 0.53 | 35.0 | 3.25e-01 | 77.5% | 49.1% |