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MH153800.1__AWN03296.1__PBI_CAMILLE_49__00050

Bact-Vir

MH153800.1__AWN03296.1__PBI_CAMILLE_49__00050

Identity

Accession:
MH153800 ↗
Kingdom:
phage

Quality

65.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Microbacterium_phage_Camille

TaxID: 2182351

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 15-60
PDB
Domain cluster: representative
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5xyiK00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 43.0 3.42e-01 91.3% 37.8%
5hn3A00 3.40.718.10 Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase 0.57 45.0 2.80e-01 95.7% 53.6%
3zq5A03 3.30.450.270 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain 0.54 39.0 2.77e-01 80.4% 28.1%
4g6tB00 6.10.20.120 Special › Helix non-globular › Arc Repressor Mutant, subunit A › 0.53 34.0 3.12e-01 95.7% 42.3%
7yj5A02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.52 38.0 2.70e-01 78.3% 65.2%
3hg9A01 3.30.1300.90 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › PilM protein, N-terminal domain 0.52 41.0 3.66e-01 100.0% 58.4%
8dvhB01 3.30.230.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.52 39.0 2.82e-01 93.5% 77.1%
2i8dA01 3.90.1150.200 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.52 41.0 3.63e-01 100.0% 91.4%
1ga6A00 3.40.50.200 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain 0.51 40.0 2.52e-01 100.0% 60.2%
5ucoA02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.51 37.0 2.69e-01 82.6% 60.8%
2y3mA02 3.30.1370.130 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.51 35.0 3.29e-01 91.3% 55.4%
3mpxA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.50 36.0 3.01e-01 95.7% 39.2%
ECOD (21)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4992470 896.1.1.0 ↗ a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related 0.71 40.0 3.66e-01 73.9% 38.3%
3972100 64.3.1.0 ↗ beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain 0.63 44.0 4.06e-01 78.3% 67.7%
4995163 2006.1.1.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.60 40.0 2.53e-01 71.7% 14.6%
4968601 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.58 38.0 2.96e-01 82.6% 28.6%
4410774 101.1.8.0 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.58 36.0 2.73e-01 73.9% 24.3%
5041526 101.1.2.54 ↗ alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.57 35.0 3.29e-01 78.3% 45.0%
4027757 101.1.2.137 ↗ alpha arrays › HTH › HTH › winged helix domain › OST-HTH 0.57 34.0 2.33e-01 71.7% 14.5%
184685 6051.5.1.1 ↗ alpha duplicates or obligate multimers › Docking domains in modular polyketide synthases › Class 3 N-terminal docking domain › Class 3 N-terminal docking domain › TubC_N 0.55 38.0 3.33e-01 71.7% 46.2%
3940266 2007.1.2.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.55 42.0 2.75e-01 84.8% 21.4%
3787894 70.3.1.1 ↗ beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.54 37.0 2.23e-01 78.3% 8.8%
4172626 2004.1.1.146 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.54 37.0 2.37e-01 73.9% 13.2%
4797400 220.3.1.5 ↗ beta barrels › PH domain-like › first barrel domain in viral glycoproteins › first barrel domain in viral glycoproteins › Rhabdo_glycop_FD, PH_Rhabdo_glycop 0.54 38.0 3.79e-01 97.8% 72.9%
4934384 101.1.2.947 ↗ alpha arrays › HTH › HTH › winged helix domain › PF27234 0.53 41.0 3.45e-01 89.1% 72.9%
4941413 7523.1.1.0 ↗ a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II 0.53 43.0 3.72e-01 100.0% 57.3%
4200531 7512.1.1.6 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_20 0.53 38.0 2.43e-01 80.4% 24.8%
5023640 292.2.1.0 ↗ a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.52 43.0 3.70e-01 97.8% 64.6%
1905827 101.1.2.174 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_56 0.52 43.0 3.69e-01 95.7% 69.2%
3566649 377.1.1.16 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-FCS 0.52 41.0 4.14e-01 93.5% 88.9%
3578203 209.1.1.0 ↗ a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like 0.52 42.0 2.97e-01 91.3% 43.3%
3309917 109.4.1.2594 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, DYW_deaminase, PPR_long, E_motif 0.52 38.0 2.20e-01 82.6% 19.3%
4940859 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 34.0 2.81e-01 76.1% 34.4%