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MH153800.1__AWN03309.1__PBI_CAMILLE_63__00066

Bact-Vir

MH153800.1__AWN03309.1__PBI_CAMILLE_63__00066

Identity

Accession:
MH153800 ↗
Kingdom:
phage

Quality

79.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 68-101
PDB
Domain cluster: representative
CATH (50)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ptfA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.81 68.0 4.45e-01 100.0% 46.9%
1qs1A02 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.81 69.0 4.25e-01 100.0% 42.1%
4xsgB00 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.78 63.0 3.95e-01 100.0% 42.0%
2epbA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.75 56.0 4.61e-01 88.2% 42.6%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.75 61.0 5.12e-01 100.0% 52.4%
5ixgA00 2.40.128.110 Mainly Beta › Beta Barrel › Lipocalin › Lipid/polyisoprenoid-binding, YceI-like 0.73 58.0 3.85e-01 100.0% 25.0%
4kktA02 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.71 57.0 4.17e-01 100.0% 37.1%
3qfgA00 2.60.40.1240 Mainly Beta › Sandwich › Immunoglobulin-like › 0.70 55.0 3.74e-01 100.0% 22.8%
1xdzA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.69 53.0 3.27e-01 94.1% 26.9%
3cpfA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.68 50.0 4.26e-01 100.0% 46.2%
3g88A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.67 50.0 3.10e-01 94.1% 27.2%
3bvxA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.66 45.0 2.96e-01 97.1% 15.6%
2w9hA00 3.40.430.10 Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A 0.66 50.0 3.31e-01 88.2% 19.7%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.66 54.0 4.41e-01 100.0% 49.3%
3fbxA00 3.60.60.30 Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › 0.65 45.0 2.49e-01 91.2% 4.0%
2cg7A02 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.65 43.0 4.07e-01 70.6% 52.3%
6eudA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 51.0 3.26e-01 82.4% 84.1%
5axmB00 3.30.70.3000 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) 0.63 43.0 2.64e-01 73.5% 76.6%
2nlkA02 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.63 53.0 3.17e-01 100.0% 13.5%
1vq8A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 46.0 3.74e-01 88.2% 39.7%
1xg9A02 3.10.25.20 Alpha Beta › Roll › Methionyl-tRNA Fmet Formyltransferase; Chain A, domain 2 › 0.62 43.0 3.81e-01 100.0% 45.2%
5c82A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.62 46.0 3.08e-01 94.1% 20.0%
3aa0B01 1.20.58.570 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › F-actin capping protein, alpha/beta subunit, N-terminal domain 0.62 42.0 3.23e-01 70.6% 27.3%
7w3rB01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.61 43.0 2.53e-01 76.5% 48.9%
1el6A02 2.20.20.20 Mainly Beta › Single Sheet › Anthopleurin-A › Baseplate structural protein gp11, C-terminal domain 0.60 43.0 4.18e-01 97.1% 68.1%
1ao8A00 3.40.430.10 Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A 0.58 42.0 2.85e-01 88.2% 18.5%
3n0vA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.58 45.0 3.43e-01 97.1% 35.7%
1yk9A00 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.58 40.0 2.74e-01 91.2% 16.8%
5aj3Q00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 46.0 3.34e-01 97.1% 30.3%
3t5tB01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.58 40.0 2.46e-01 85.3% 53.0%
1k8kA04 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.57 39.0 3.03e-01 97.1% 27.2%
4nswA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 44.0 3.29e-01 100.0% 40.4%
4k3bA03 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.57 46.0 3.51e-01 100.0% 42.4%
3dluA00 3.30.56.30 Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › Signal recognition particle, SRP19-like subunit 0.57 43.0 3.21e-01 97.1% 31.6%
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.55 41.0 3.25e-01 100.0% 37.3%
1qs1A01 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.55 38.0 2.62e-01 100.0% 41.4%
1fi8C00 2.60.40.550 Mainly Beta › Sandwich › Immunoglobulin-like › Ecotin 0.55 44.0 3.55e-01 97.1% 47.4%
3weeB03 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.55 38.0 2.77e-01 70.6% 40.0%
6j09A03 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.55 43.0 3.44e-01 97.1% 47.0%
2qdfA03 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.55 46.0 3.61e-01 100.0% 50.6%
1pvgA01 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.54 38.0 2.37e-01 97.1% 11.5%
2qswA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.53 42.0 3.22e-01 94.1% 37.8%
3bwnD01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.52 39.0 2.77e-01 94.1% 27.1%
1dr9A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 43.0 3.20e-01 100.0% 61.1%
3rhtA00 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.51 36.0 2.28e-01 82.4% 48.4%
2l66A00 2.10.260.10 Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › 0.51 39.0 3.52e-01 91.2% 62.3%
4bzaA02 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.51 39.0 3.05e-01 94.1% 42.5%
2b0rB00 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.51 40.0 2.70e-01 91.2% 20.3%
3j7aV00 2.40.50.1000 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.51 38.0 2.67e-01 97.1% 22.6%
4dyoA02 2.30.250.10 Mainly Beta › Roll › Aminopeptidase i, Domain 2 › Aminopeptidase i, Domain 2 0.50 42.0 2.83e-01 100.0% 61.2%
ECOD (60)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3356712 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.94 85.0 7.71e-01 100.0% 77.8%
5038876 1.1.13.2 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_attach 0.86 71.0 5.24e-01 97.1% 36.7%
3817267 4.25.1.0 beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain 0.82 68.0 5.04e-01 100.0% 64.2%
3707345 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.82 68.0 4.97e-01 94.1% 47.8%
3646876 4.25.1.0 beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain 0.80 66.0 4.90e-01 100.0% 65.3%
3177469 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.80 64.0 5.26e-01 100.0% 55.7%
3612182 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.80 65.0 4.78e-01 94.1% 53.3%
1144777 4.25.1.0 beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain 0.79 67.0 4.79e-01 100.0% 59.6%
3938274 2003.1.3.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain 0.78 68.0 4.15e-01 100.0% 64.9%
3940894 60.1.1.0 beta barrels › SPOC domain-like › SPOC domain-related › SPOC domain 0.74 56.0 3.69e-01 88.2% 22.0%
3442241 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.72 57.0 3.31e-01 97.1% 9.8%
4968862 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 57.0 5.41e-01 100.0% 75.6%
3645007 5.1.10.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed 0.71 59.0 4.51e-01 100.0% 61.2%
3636798 7516.1.1.105 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Fringe, DUF604 0.71 53.0 3.01e-01 88.2% 16.6%
4942056 11.4.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Antigen MPT63/MPB63 (immunoprotective extracellular protein) › Antigen MPT63/MPB63 (immunoprotective extracellular protein) 0.71 58.0 3.91e-01 100.0% 49.3%
5045706 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.70 54.0 4.45e-01 94.1% 48.6%
4024275 4186.1.1.1 beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p 0.69 57.0 4.08e-01 100.0% 59.1%
4990492 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.68 53.0 4.81e-01 94.1% 74.0%
4946993 4.1.1.479 beta barrels › SH3 › SH3 › SH3 › eIF-5a 0.68 55.0 4.53e-01 100.0% 48.6%
4946793 11.1.1.1392 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Metallophos 0.67 56.0 3.90e-01 100.0% 28.3%
4931072 4.1.1.139 beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.67 55.0 4.49e-01 100.0% 48.6%
3722521 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.66 50.0 3.05e-01 85.3% 22.3%
3643549 4.1.1.139 beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.66 52.0 4.22e-01 100.0% 42.5%
4969104 304.12.1.0 a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 0.64 46.0 3.81e-01 97.1% 45.9%
4940409 304.114.1.0 a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain 0.64 53.0 4.15e-01 100.0% 50.0%
4931129 304.114.1.0 a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain 0.63 52.0 4.07e-01 100.0% 47.1%
3577252 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.63 51.0 3.69e-01 97.1% 90.0%
3590878 7569.1.1.1 a/b three-layered sandwiches › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › UDG 0.63 46.0 3.01e-01 100.0% 41.9%
4958890 304.114.1.0 a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain 0.62 53.0 4.09e-01 100.0% 50.0%
4945859 230.1.1.5 a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 0.62 43.0 3.04e-01 76.5% 24.6%
4988502 375.1.1.298 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_HMPTM 0.62 45.0 4.31e-01 100.0% 64.4%
3328712 4964.1.1.0 alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I 0.61 49.0 2.96e-01 85.3% 46.1%
4385584 327.13.1.2 a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif I in type III secretion system › Ring-building motif I in type III secretion system › YscJ_FliF_C 0.61 46.0 2.96e-01 97.1% 17.1%
4408923 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 43.0 2.85e-01 76.5% 17.4%
3957831 65.1.1.0 beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases 0.60 46.0 3.25e-01 97.1% 36.2%
3666034 225.1.1.7 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c_3 0.60 49.0 3.55e-01 100.0% 37.3%
3663192 868.1.1.11 a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › DUF7903 0.59 43.0 2.84e-01 97.1% 66.3%
3795719 810.1.1.2 a+b two layers › BtrG-like (Pfam 03674) › BtrG-like (Pfam 03674) › BtrG-like (Pfam 03674) › GGACT 0.58 42.0 2.84e-01 85.3% 25.8%
3657432 220.1.1.205 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_PHS1 0.57 43.0 3.13e-01 100.0% 36.4%
4451014 7552.1.1.1 a/b three-layered sandwiches › Amidase signature (AS) enzymes › Amidase signature (AS) enzymes › Amidase signature (AS) enzymes › Amidase 0.57 41.0 2.38e-01 94.1% 58.1%
4947171 2.1.1.4 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 0.57 45.0 3.34e-01 100.0% 68.6%
4019666 7552.1.1.1 a/b three-layered sandwiches › Amidase signature (AS) enzymes › Amidase signature (AS) enzymes › Amidase signature (AS) enzymes › Amidase 0.56 40.0 2.36e-01 94.1% 62.1%
4943803 2007.1.1.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like 0.56 43.0 2.66e-01 100.0% 36.7%
5044501 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.56 42.0 3.23e-01 100.0% 39.1%
4990259 2.1.1.4 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 0.56 46.0 3.15e-01 97.1% 24.6%
3205638 7552.1.1.1 a/b three-layered sandwiches › Amidase signature (AS) enzymes › Amidase signature (AS) enzymes › Amidase signature (AS) enzymes › Amidase 0.55 41.0 2.44e-01 94.1% 56.7%
4997345 3435.1.1.0 a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC 0.55 45.0 3.17e-01 100.0% 35.2%
3726419 7552.1.1.1 a/b three-layered sandwiches › Amidase signature (AS) enzymes › Amidase signature (AS) enzymes › Amidase signature (AS) enzymes › Amidase 0.54 39.0 2.25e-01 94.1% 51.8%
3993716 327.7.1.0 a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like 0.54 45.0 3.70e-01 100.0% 48.6%
3741335 109.4.1.338 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RIC1 0.54 45.0 2.63e-01 100.0% 21.7%
4001465 11.1.1.924 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_F54D1_6_2 0.54 44.0 2.78e-01 100.0% 62.8%
5028778 3860.1.1.0 alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm 0.54 38.0 2.54e-01 100.0% 17.2%
3829501 3016.1.1.12 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Alliinase_C 0.54 40.0 2.82e-01 94.1% 25.2%
3641171 3016.1.1.12 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Alliinase_C 0.53 41.0 2.97e-01 100.0% 60.0%
3738677 4186.1.1.1 beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p 0.53 35.0 2.82e-01 100.0% 61.0%
5050547 2.1.1.4 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 0.53 43.0 3.11e-01 100.0% 29.6%
3940817 7523.1.1.0 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II 0.52 39.0 2.84e-01 97.1% 91.4%
3466109 2003.1.2.16 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 0.51 39.0 2.33e-01 94.1% 32.9%
3717699 5.1.2.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.51 41.0 2.55e-01 100.0% 16.1%
4444951 3124.1.1.1 beta sandwiches › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › NAC 0.51 38.0 3.42e-01 97.1% 61.7%