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MH153801.1__AWN03400.1__PBI_COUNT_78__00076
Bact-VirMH153801.1__AWN03400.1__PBI_COUNT_78__00076
Identity
- Accession:
- MH153801 ↗
- Kingdom:
- phage
Quality
61.1
mean pLDDT
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 17-80
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2f68X01 | 2.60.40.1280 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.63 | 42.0 | 3.30e-01 | 90.6% | 31.9% |
| 2hn1A01 | 3.30.460.20 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like | 0.59 | 42.0 | 3.30e-01 | 92.2% | 34.5% |
| 4egwA01 | 3.30.460.20 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like | 0.58 | 43.0 | 3.48e-01 | 85.9% | 39.7% |
| 7qi3A01 | 3.30.2140.20 | Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › | 0.58 | 46.0 | 3.02e-01 | 92.2% | 30.3% |
| 3hg9A01 | 3.30.1300.90 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › PilM protein, N-terminal domain | 0.58 | 43.0 | 4.11e-01 | 85.9% | 67.5% |
| 3fogA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.56 | 38.0 | 3.28e-01 | 70.3% | 64.7% |
| 1ib6A02 | 3.90.110.10 | Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal | 0.55 | 43.0 | 3.30e-01 | 90.6% | 48.2% |
| 6o15A02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.55 | 38.0 | 2.61e-01 | 73.4% | 60.9% |
| 5g5tA02 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.55 | 42.0 | 3.14e-01 | 92.2% | 79.4% |
| 1b8pA02 | 3.90.110.10 | Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal | 0.54 | 44.0 | 3.38e-01 | 98.4% | 50.6% |
| 3n91A02 | 2.40.128.420 | Mainly Beta › Beta Barrel › Lipocalin › | 0.53 | 45.0 | 3.62e-01 | 98.4% | 97.8% |
| 7xoiD01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.53 | 41.0 | 3.48e-01 | 95.3% | 49.5% |
| 6r8gB02 | 3.90.110.10 | Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal | 0.53 | 41.0 | 3.15e-01 | 90.6% | 45.3% |
| 1zc3B00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 41.0 | 3.58e-01 | 93.8% | 53.2% |
| 1cjaA01 | 3.30.1010.10 | Alpha Beta › 2-Layer Sandwich › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 | 0.52 | 42.0 | 3.34e-01 | 93.8% | 79.3% |
| 2dcnA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.52 | 42.0 | 2.87e-01 | 100.0% | 91.2% |
| 1pqxA00 | 3.30.1370.70 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Scaffold protein Nfu/NifU, N-terminal domain | 0.52 | 42.0 | 3.81e-01 | 92.2% | 64.8% |
| 4oxiA01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.51 | 41.0 | 2.60e-01 | 95.3% | 33.7% |
| 2petA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 42.0 | 3.58e-01 | 96.9% | 68.7% |
| 5choF00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.51 | 39.0 | 3.07e-01 | 89.1% | 80.0% |
| 4kt3B00 | 3.10.450.170 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › type vi secretion system effector-immunity co pseudomonas protegens | 0.51 | 35.0 | 2.87e-01 | 71.9% | 45.3% |
| 6n8pA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 36.0 | 2.30e-01 | 76.6% | 92.4% |
| 3votB02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.51 | 38.0 | 2.59e-01 | 85.9% | 69.6% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3386302 | 3186.1.1.1 ↗ | a+b two layers › C-terminal domain of FliK › C-terminal domain of FliK › C-terminal domain of FliK › Flg_hook | 0.64 | 51.0 | 4.72e-01 | 90.6% | 69.4% |
| 3628520 | 5.1.4.308 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, LLGL | 0.61 | 40.0 | 2.27e-01 | 84.4% | 5.2% |
| 3603860 | 2484.1.1.26 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Piwi | 0.58 | 45.0 | 3.25e-01 | 92.2% | 78.9% |
| 3979364 | 247.1.1.11 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 | 0.56 | 46.0 | 3.09e-01 | 93.8% | 36.4% |
| 3402054 | 386.1.1.4 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED | 0.55 | 36.0 | 3.68e-01 | 84.4% | 70.0% |
| 3750184 | 1170.1.1.1 ↗ | beta barrels › IL8-related › IL8-related › IL8 › IL8 | 0.55 | 36.0 | 3.52e-01 | 93.8% | 58.7% |
| 4486857 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.54 | 38.0 | 3.12e-01 | 78.1% | 55.6% |
| 3594717 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.53 | 44.0 | 3.68e-01 | 96.9% | 73.3% |
| 5049519 | 2004.1.1.16 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf | 0.53 | 40.0 | 2.85e-01 | 82.8% | 41.7% |
| 3829563 | 897.1.1.0 ↗ | a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 | 0.53 | 44.0 | 3.38e-01 | 98.4% | 46.7% |
| 3562428 | 5.1.4.428 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, LLGL, Lgl_C | 0.52 | 43.0 | 2.40e-01 | 93.8% | 90.8% |
| 3915014 | 5.1.4.308 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, LLGL | 0.52 | 43.0 | 2.61e-01 | 93.8% | 80.9% |
| 3763426 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.51 | 43.0 | 3.10e-01 | 95.3% | 37.9% |
| 4978525 | 4121.1.1.1 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA | 0.51 | 43.0 | 2.95e-01 | 100.0% | 51.8% |
| 3841924 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.50 | 39.0 | 3.30e-01 | 87.5% | 50.0% |