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MH153803.1__AWN03583.1__PBI_HYPERION_68__00068
Bact-VirMH153803.1__AWN03583.1__PBI_HYPERION_68__00068
Identity
- Accession:
- MH153803 ↗
- Kingdom:
- phage
Quality
73.1
mean pLDDT
Taxonomy
TaxID: 2182354
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 28-81
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3vqiD03 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.61 | 44.0 | 3.96e-01 | 75.9% | 90.7% |
| 2wyqA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.61 | 41.0 | 3.67e-01 | 70.4% | 89.6% |
| 5odnC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 41.0 | 3.39e-01 | 74.1% | 37.3% |
| 6njyA01 | 3.30.70.1900 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 40.0 | 3.22e-01 | 75.9% | 97.6% |
| 4k15A00 | 2.60.40.3860 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 39.0 | 2.89e-01 | 70.4% | 65.2% |
| 1amuA04 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.56 | 38.0 | 3.26e-01 | 72.2% | 69.8% |
| 5u89A01 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.56 | 38.0 | 3.28e-01 | 72.2% | 67.4% |
| 3b34A02 | 3.30.2010.30 | Alpha Beta › 2-Layer Sandwich › Zincin-like › | 0.53 | 36.0 | 3.12e-01 | 70.4% | 44.7% |
| 3ihlB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 43.0 | 2.94e-01 | 98.1% | 96.9% |
| 7qh2C03 | 3.30.70.2740 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 34.0 | 3.16e-01 | 70.4% | 87.2% |
| 2r6fA04 | 1.10.8.280 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › ABC transporter ATPase domain-like | 0.51 | 34.0 | 2.83e-01 | 72.2% | 98.3% |
| 2f7sA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 37.0 | 2.75e-01 | 87.0% | 92.2% |
| 2byvE05 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.50 | 35.0 | 3.18e-01 | 75.9% | 88.6% |
| 2avxA00 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.50 | 35.0 | 2.59e-01 | 75.9% | 76.6% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3357798 | 3082.1.1.3 ↗ | extended segments › C-terminal region of nonsense mediated decay factor UPF2 › C-terminal region of nonsense mediated decay factor UPF2 › C-terminal region of nonsense mediated decay factor UPF2 › Pro_isomerase | 0.66 | 45.0 | 4.79e-01 | 72.2% | 93.2% |
| 3275900 | 4015.1.1.1 ↗ | alpha complex topology › alpha-helical domain in sec1/munc18-like (SM) proteins › alpha-helical domain in sec1/munc18-like (SM) proteins › alpha-helical domain in sec1/munc18-like (SM) proteins › Sec1 | 0.60 | 42.0 | 2.81e-01 | 74.1% | 35.6% |
| 3614862 | 4015.1.1.1 ↗ | alpha complex topology › alpha-helical domain in sec1/munc18-like (SM) proteins › alpha-helical domain in sec1/munc18-like (SM) proteins › alpha-helical domain in sec1/munc18-like (SM) proteins › Sec1 | 0.59 | 39.0 | 2.66e-01 | 70.4% | 42.6% |
| 3351840 | 284.1.3.2 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › OSR1_C | 0.57 | 38.0 | 3.59e-01 | 70.4% | 87.0% |
| 4027980 | 3156.3.1.2 ↗ | beta sandwiches › Cupredoxin-like › Surface antigen 1 (SAG1)-related-sequence (SRS) family › Surface antigen 1 (SAG1)-related-sequence (SRS) family › s48_45 | 0.55 | 37.0 | 2.68e-01 | 70.4% | 71.5% |
| 4564381 | 109.2.1.32 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › SQHop_cyclase_C | 0.54 | 43.0 | 2.67e-01 | 100.0% | 33.2% |
| 3653569 | 221.1.1.2 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin | 0.54 | 37.0 | 3.70e-01 | 72.2% | 87.3% |
| 3574409 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.53 | 36.0 | 3.12e-01 | 70.4% | 65.6% |
| 3442112 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.53 | 37.0 | 3.73e-01 | 74.1% | 87.3% |
| 4324528 | 284.1.3.1 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › SNF5 | 0.53 | 37.0 | 3.38e-01 | 74.1% | 80.0% |
| 3194492 | 109.4.1.1297 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TIMELESS, PF27570 | 0.52 | 42.0 | 2.40e-01 | 100.0% | 14.6% |
| 4373934 | 140.1.1.8 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › tRNA-synt_1g,Anticodon_3 | 0.52 | 37.0 | 2.53e-01 | 81.5% | 68.6% |
| 5022447 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.52 | 40.0 | 3.30e-01 | 96.3% | 87.2% |
| 1888906 | 2002.1.1.39 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_3 | 0.50 | 40.0 | 2.48e-01 | 96.3% | 83.0% |
| 3453248 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.50 | 35.0 | 3.57e-01 | 74.1% | 92.7% |