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MH153804.1__AWN03639.1__PBI_JACE_18__00018
Bact-VirMH153804.1__AWN03639.1__PBI_JACE_18__00018
Identity
- Accession:
- MH153804 ↗
- Kingdom:
- phage
Quality
92.0
mean pLDDT
Taxonomy
TaxID: 2182360
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 21-152
Domain cluster:
rep: RifSed_csp2_10ft_3_scaffold_6_prodigal-single.1__X__X__00069__D90-185_575-630
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13539.12 best | Peptidase_M15_4 | 37.7 | 3.30e-09 | 49.2% | 94.1% |
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2phcB01 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.61 | 32.0 | 3.91e-01 | 84.1% | 79.5% |
| 3qguA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.59 | 37.0 | 3.66e-01 | 86.4% | 56.9% |
| 3zxoA00 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.58 | 48.0 | 4.96e-01 | 88.6% | 99.2% |
| 5ixuA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 37.0 | 4.14e-01 | 70.5% | 82.4% |
| 1cc8A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 30.0 | 3.69e-01 | 70.5% | 84.7% |
| 3n5mB01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.57 | 41.0 | 3.77e-01 | 97.7% | 55.1% |
| 3i3wA04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.57 | 30.0 | 3.72e-01 | 76.5% | 84.4% |
| 3asaA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.56 | 38.0 | 3.80e-01 | 98.5% | 64.7% |
| 7qh2C03 | 3.30.70.2740 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 30.0 | 3.70e-01 | 79.5% | 84.6% |
| 1khmA00 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.56 | 31.0 | 3.64e-01 | 87.1% | 77.5% |
| 2douB01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.56 | 35.0 | 3.41e-01 | 86.4% | 54.4% |
| 2x5dA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.56 | 37.0 | 3.80e-01 | 98.5% | 69.5% |
| 1fc4A02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.56 | 36.0 | 3.60e-01 | 86.4% | 61.8% |
| 4my5D01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.55 | 37.0 | 3.50e-01 | 98.5% | 55.7% |
| 1b8gA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.55 | 39.0 | 3.68e-01 | 100.0% | 59.1% |
| 1fjeB01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.55 | 30.0 | 3.67e-01 | 70.5% | 85.2% |
| 3nraA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.55 | 36.0 | 3.40e-01 | 85.6% | 53.1% |
| 3fdbA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.55 | 36.0 | 3.51e-01 | 97.7% | 56.8% |
| 3ftbA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.54 | 35.0 | 3.72e-01 | 100.0% | 75.0% |
| 3l8aA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.54 | 35.0 | 3.40e-01 | 87.1% | 55.1% |
| 3fkdA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.54 | 34.0 | 3.61e-01 | 97.7% | 72.3% |
| 3wy7D01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.53 | 33.0 | 3.48e-01 | 86.4% | 66.7% |
| 1lc5A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.53 | 34.0 | 3.46e-01 | 98.5% | 65.6% |
| 2ctkA00 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.53 | 29.0 | 3.21e-01 | 81.8% | 64.4% |
| 1wjwA01 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.52 | 28.0 | 3.35e-01 | 75.8% | 78.8% |
| 2dr1A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.52 | 35.0 | 3.54e-01 | 98.5% | 67.4% |
| 5wmkA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.52 | 36.0 | 3.39e-01 | 98.5% | 55.8% |
| 5bk7H01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.52 | 34.0 | 3.48e-01 | 86.4% | 67.4% |
| 4dzdA01 | 3.30.70.1200 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 1 | 0.50 | 24.0 | 3.05e-01 | 83.3% | 78.6% |
| 3g7qA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.50 | 36.0 | 3.44e-01 | 98.5% | 62.2% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3775322 | 304.9.1.78 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF28978 | 0.64 | 33.0 | 4.01e-01 | 70.5% | 78.8% |
| 4185082 | 3016.1.1.1 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_1_2 | 0.61 | 28.0 | 3.64e-01 | 81.8% | 77.1% |
| 4095823 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.58 | 33.0 | 3.86e-01 | 91.7% | 80.7% |
| 1503771 | 3016.1.1.2 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_3 | 0.58 | 41.0 | 4.40e-01 | 97.7% | 87.4% |
| 4977752 | 3016.1.1.1 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_1_2 | 0.57 | 37.0 | 4.09e-01 | 97.7% | 83.7% |
| 4126306 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.57 | 32.0 | 3.83e-01 | 78.8% | 83.5% |
| 3329054 | 3016.1.1.1 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_1_2 | 0.56 | 39.0 | 3.98e-01 | 98.5% | 74.4% |
| 4017553 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.56 | 35.0 | 4.06e-01 | 73.5% | 87.4% |
| 1193858 | 3016.1.1.1 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_1_2 | 0.56 | 36.0 | 3.83e-01 | 85.6% | 74.6% |
| 3743748 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 35.0 | 4.10e-01 | 73.5% | 91.1% |
| 4988435 | 3016.1.1.1 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_1_2 | 0.56 | 34.0 | 3.91e-01 | 99.2% | 86.7% |
| 1152753 | 3016.1.1.1 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_1_2 | 0.55 | 38.0 | 3.96e-01 | 98.5% | 78.2% |
| 5076377 | 3016.1.1.1 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_1_2 | 0.55 | 33.0 | 3.88e-01 | 97.7% | 87.8% |
| 3916934 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.55 | 30.0 | 3.49e-01 | 80.3% | 77.6% |
| 3241590 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.54 | 32.0 | 3.76e-01 | 87.1% | 87.1% |
| 3405387 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 24.0 | 3.48e-01 | 75.0% | 96.4% |
| 3286150 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.54 | 34.0 | 3.56e-01 | 98.5% | 67.5% |
| 3583421 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.54 | 33.0 | 3.78e-01 | 70.5% | 83.2% |
| 4027654 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.54 | 29.0 | 3.58e-01 | 81.8% | 88.0% |
| 5011645 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.54 | 29.0 | 3.56e-01 | 97.7% | 86.7% |
| 3290247 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.54 | 31.0 | 3.82e-01 | 81.8% | 97.3% |
| 3937898 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.53 | 39.0 | 3.44e-01 | 75.0% | 73.5% |
| 1114649 | 3016.1.1.1 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_1_2 | 0.53 | 34.0 | 3.81e-01 | 97.7% | 85.7% |
| 3198785 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.53 | 35.0 | 3.63e-01 | 98.5% | 70.4% |
| 357071 | 3016.1.1.1 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_1_2 | 0.52 | 33.0 | 3.70e-01 | 97.7% | 86.5% |
| 3499589 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.51 | 32.0 | 3.50e-01 | 87.1% | 79.0% |
| 4012849 | 304.20.1.0 ↗ | a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain | 0.51 | 35.0 | 3.26e-01 | 71.2% | 84.1% |
| 3439467 | 241.6.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Arp2/3 complex subunits › Arp2/3 complex subunits | 0.50 | 40.0 | 4.07e-01 | 94.7% | 86.2% |
D2
medium
residues 174-336
Domain cluster:
rep: OR283206.1__WNY14835.1__SEA_MOONTOWERMANIA_41__00041__D481-606
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08310.18 best | LGFP | 35.2 | 1.80e-08 | 34.4% | 88.7% |
| PF08310.18 | LGFP | 42.6 | 8.60e-11 | 31.9% | 96.2% |
| PF08310.18 | LGFP | 23.1 | 1.10e-04 | 20.2% | 60.4% |