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MH153804.1__AWN03662.1__PBI_JACE_42__00042
Bact-VirMH153804.1__AWN03662.1__PBI_JACE_42__00042
Identity
- Accession:
- MH153804 ↗
- Kingdom:
- phage
Quality
87.4
mean pLDDT
Taxonomy
TaxID: 2182360
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 16-107
Domain cluster:
representative
CATH (41)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gsvA00 | 6.10.140.40 | Special › Helix non-globular › Helix Hairpins › | 0.75 | 53.0 | 6.12e-01 | 82.6% | 100.0% |
| 2ctqA01 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.70 | 46.0 | 4.63e-01 | 80.4% | 66.0% |
| 1wp7A00 | 1.10.287.770 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like | 0.70 | 42.0 | 4.90e-01 | 72.8% | 85.9% |
| 3qo8A01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.69 | 42.0 | 4.06e-01 | 77.2% | 53.8% |
| 1wa8A00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.69 | 42.0 | 4.16e-01 | 72.8% | 57.6% |
| 5jajA03 | 1.20.1320.30 | Mainly Alpha › Up-down Bundle › phosphoenolpyruvate carboxylase, domain 3 › | 0.66 | 44.0 | 4.05e-01 | 89.1% | 53.4% |
| 1zymA02 | 1.10.274.10 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › PtsI, HPr-binding domain | 0.66 | 49.0 | 4.44e-01 | 79.3% | 58.7% |
| 2l3lA01 | 1.20.58.1250 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Tubulin Binding Cofactor C, N-terminal domain | 0.63 | 48.0 | 4.61e-01 | 95.7% | 69.8% |
| 3anwB00 | 1.20.58.2050 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.63 | 51.0 | 4.16e-01 | 100.0% | 48.8% |
| 4oydB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.62 | 55.0 | 5.04e-01 | 95.7% | 94.0% |
| 2nrlA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.62 | 50.0 | 4.37e-01 | 92.4% | 57.2% |
| 2qwoB00 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.61 | 49.0 | 4.93e-01 | 85.9% | 97.8% |
| 3pmcA00 | 1.10.490.70 | Mainly Alpha › Orthogonal Bundle › Globin-like › Histidine kinase N-terminal domain | 0.60 | 53.0 | 4.71e-01 | 96.7% | 92.4% |
| 1t72A02 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.60 | 54.0 | 5.34e-01 | 96.7% | 94.9% |
| 3qwuA03 | 3.30.70.2160 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 43.0 | 3.76e-01 | 97.8% | 49.6% |
| 2yfaB01 | 1.20.1440.210 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.60 | 50.0 | 4.58e-01 | 98.9% | 69.7% |
| 1ydxA02 | 1.10.287.1120 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein | 0.60 | 41.0 | 4.15e-01 | 77.2% | 72.2% |
| 2f5jB00 | 1.10.274.30 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › MRG domain | 0.59 | 47.0 | 4.00e-01 | 88.0% | 62.3% |
| 1m62A00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.59 | 48.0 | 4.97e-01 | 95.7% | 92.0% |
| 2yfaA02 | 1.20.1440.210 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.58 | 47.0 | 4.34e-01 | 85.9% | 88.8% |
| 3q2eA00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.58 | 47.0 | 4.44e-01 | 87.0% | 89.7% |
| 1bgcA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.57 | 48.0 | 3.98e-01 | 90.2% | 75.3% |
| 1cunA01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 50.0 | 4.86e-01 | 95.7% | 97.1% |
| 2w02B01 | 1.10.150.640 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › AcsD, thumb domain, helical bundle | 0.56 | 38.0 | 4.16e-01 | 78.3% | 86.5% |
| 1u7lA02 | 1.20.1460.10 | Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › subunit c (vma5p) of the yeast v-atpase, domain 2 | 0.56 | 45.0 | 3.65e-01 | 89.1% | 72.1% |
| 5nl6A02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 49.0 | 4.69e-01 | 96.7% | 89.8% |
| 1t98A02 | 1.20.58.590 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Chromosome partition protein MukF, middle domain | 0.55 | 49.0 | 4.10e-01 | 100.0% | 87.1% |
| 2oduA02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 50.0 | 4.78e-01 | 100.0% | 94.3% |
| 1uurA01 | 1.20.58.240 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › STAT; domain 1 | 0.55 | 49.0 | 4.64e-01 | 97.8% | 96.4% |
| 3wiwA00 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.55 | 49.0 | 3.24e-01 | 98.9% | 38.8% |
| 2icwG02 | 1.10.10.530 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › mam-mhc complex, Chain D, Domain 2 | 0.55 | 41.0 | 4.15e-01 | 85.9% | 80.9% |
| 1aueB00 | 1.20.120.150 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › FKBP12-rapamycin binding domain | 0.54 | 41.0 | 4.07e-01 | 95.7% | 77.7% |
| 4dxwA02 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 42.0 | 3.99e-01 | 98.9% | 69.6% |
| 1rx0A03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.53 | 41.0 | 3.50e-01 | 83.7% | 87.7% |
| 2qywA00 | 1.20.58.400 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins | 0.53 | 45.0 | 4.54e-01 | 92.4% | 89.5% |
| 2juaA00 | 1.20.1480.30 | Mainly Alpha › Up-down Bundle › hypothetical protein mp506/mpn330, domain 1 › Designed four-helix bundle protein | 0.52 | 43.0 | 4.18e-01 | 89.1% | 87.3% |
| 3thxB03 | 1.10.1420.10 | Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › | 0.52 | 40.0 | 3.22e-01 | 82.6% | 76.1% |
| 4akgA14 | 1.20.1280.160 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.52 | 39.0 | 3.75e-01 | 80.4% | 100.0% |
| 4u7iA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.51 | 45.0 | 4.51e-01 | 98.9% | 95.7% |
| 1ax8A00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.51 | 36.0 | 3.26e-01 | 88.0% | 52.3% |
| 5cofA00 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.50 | 44.0 | 3.64e-01 | 98.9% | 62.8% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3480589 | 650.1.1.0 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain | 0.78 | 54.0 | 5.94e-01 | 83.7% | 86.7% |
| 3591815 | 650.1.1.1 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ | 0.75 | 53.0 | 5.88e-01 | 83.7% | 89.3% |
| 3612725 | 650.1.1.1 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ | 0.70 | 54.0 | 5.60e-01 | 94.6% | 87.1% |
| 4979232 | 3930.1.1.0 ↗ | alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase | 0.68 | 49.0 | 4.25e-01 | 92.4% | 50.4% |
| 3194621 | 5081.1.1.1 ↗ | alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid | 0.68 | 60.0 | 4.24e-01 | 95.7% | 51.5% |
| 3488979 | 192.5.1.0 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat | 0.68 | 44.0 | 3.93e-01 | 77.2% | 48.8% |
| 3697869 | 608.1.1.0 ↗ | alpha arrays › AhpD-like › AhpD-like › AhpD-like | 0.66 | 55.0 | 3.86e-01 | 90.2% | 30.0% |
| 3889971 | 109.4.1.1643 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RSLD_CPSF6 | 0.66 | 50.0 | 4.73e-01 | 100.0% | 67.3% |
| 4935180 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.64 | 49.0 | 4.78e-01 | 90.2% | 75.0% |
| 1713219 | 601.4.1.5 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains › HBM | 0.63 | 53.0 | 4.94e-01 | 100.0% | 73.5% |
| 3787585 | 5086.1.1.87 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › ING | 0.63 | 45.0 | 4.31e-01 | 73.9% | 76.2% |
| 3773905 | 604.3.1.33 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › RSLD_CPSF6 | 0.62 | 44.0 | 4.77e-01 | 89.1% | 89.3% |
| 3382499 | 3755.3.1.308 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF629 | 0.60 | 47.0 | 3.88e-01 | 85.9% | 53.1% |
| 4247950 | 4994.1.1.1 ↗ | alpha duplicates or obligate multimers › EF2458-like › EF2458-like › EF2458-like › DUF1507 | 0.60 | 49.0 | 4.91e-01 | 97.8% | 87.4% |
| 3900969 | 604.1.1.1 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin | 0.59 | 55.0 | 5.07e-01 | 100.0% | 90.4% |
| 3500881 | 133.1.1.1 ↗ | alpha bundles › DH domain-like › DBL homology domain (DH-domain) › DBL homology domain (DH-domain) › RhoGEF | 0.59 | 54.0 | 4.14e-01 | 100.0% | 87.8% |
| 3543090 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.59 | 53.0 | 5.12e-01 | 97.8% | 95.2% |
| 3592177 | 604.3.1.1 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › BAG | 0.59 | 42.0 | 4.74e-01 | 87.0% | 98.6% |
| 3182954 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.58 | 51.0 | 3.87e-01 | 94.6% | 92.2% |
| 3458224 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.58 | 50.0 | 4.69e-01 | 96.7% | 78.2% |
| 5075584 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.57 | 43.0 | 3.48e-01 | 90.2% | 41.7% |
| 3726383 | 109.4.1.1450 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF29050 | 0.56 | 49.0 | 3.08e-01 | 96.7% | 30.4% |
| 3479966 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.56 | 48.0 | 4.23e-01 | 92.4% | 88.5% |
| 3786679 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.56 | 38.0 | 3.38e-01 | 71.7% | 83.6% |
| 3219672 | 601.1.2.79 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › TMEM126_like | 0.56 | 48.0 | 3.78e-01 | 94.6% | 87.2% |
| None | — | 0.55 | 46.0 | 3.46e-01 | 100.0% | 37.4% | |
| 3846034 | 604.1.1.1 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin | 0.55 | 49.0 | 4.30e-01 | 98.9% | 80.7% |
| 5040685 | 5065.1.1.1 ↗ | alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › ABC-3 | 0.55 | 46.0 | 3.45e-01 | 97.8% | 61.9% |
| 4028105 | 6155.1.1.2 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › PQ-loop | 0.54 | 43.0 | 4.03e-01 | 92.4% | 69.6% |
| 3501998 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.54 | 43.0 | 4.51e-01 | 92.4% | 95.3% |
| 3622326 | 109.25.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › GPCR-autoproteolysis inducing domain subdomain A › GPCR-autoproteolysis inducing domain subdomain A › GAIN | 0.54 | 47.0 | 4.15e-01 | 98.9% | 65.9% |
| 5070360 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.54 | 39.0 | 3.31e-01 | 77.2% | 71.0% |
| 3197864 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.54 | 41.0 | 3.98e-01 | 82.6% | 73.0% |
| 3461370 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.53 | 41.0 | 4.29e-01 | 92.4% | 89.4% |
| 3505833 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.53 | 44.0 | 3.60e-01 | 95.7% | 84.3% |
| 3625558 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.52 | 45.0 | 3.96e-01 | 93.5% | 80.0% |
| 3788338 | 604.12.1.9 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › ATG1-like_MIT2 | 0.52 | 36.0 | 3.92e-01 | 92.4% | 91.9% |
| 3498827 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.52 | 47.0 | 4.46e-01 | 100.0% | 100.0% |
| 3782040 | 101.1.22.0 ↗ | alpha arrays › HTH › HTH › double HTH | 0.52 | 43.0 | 3.99e-01 | 93.5% | 72.2% |
| 5063374 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.51 | 42.0 | 3.74e-01 | 91.3% | 63.0% |
| 3279916 | 633.21.1.34 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › DUF7144 | 0.50 | 43.0 | 3.98e-01 | 92.4% | 89.6% |
| 3470483 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.50 | 44.0 | 3.98e-01 | 100.0% | 84.6% |