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MH153807.1__AWN03849.1__PBI_PEREGRIN_9__00009
Bact-VirMH153807.1__AWN03849.1__PBI_PEREGRIN_9__00009
Identity
- Accession:
- MH153807 ↗
- Kingdom:
- phage
Quality
69.4
mean pLDDT
Taxonomy
TaxID: 2182361
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 3-53
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3k6tB00 | 1.20.5.4010 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.78 | 55.0 | 5.61e-01 | 74.5% | 81.6% |
| 7vevA01 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.67 | 51.0 | 3.37e-01 | 88.2% | 25.4% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3355500 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.82 | 54.0 | 3.06e-01 | 72.5% | 7.1% |
| 4974737 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.81 | 57.0 | 3.56e-01 | 74.5% | 16.9% |
| 3661174 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.74 | 53.0 | 3.48e-01 | 76.5% | 18.6% |
| 3602194 | 2004.1.1.293 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_15 | 0.69 | 54.0 | 4.06e-01 | 86.3% | 48.8% |
| 3610709 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.68 | 43.0 | 2.81e-01 | 74.5% | 15.0% |
| 3684881 | 109.4.1.127 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MIF4G_like | 0.65 | 50.0 | 3.32e-01 | 86.3% | 35.5% |
| 3750381 | 109.4.1.46 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › IBN_N | 0.62 | 46.0 | 2.89e-01 | 80.4% | 31.0% |
| 3400454 | 220.1.1.49 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Carm_PH | 0.62 | 44.0 | 3.19e-01 | 82.4% | 24.4% |
| 3596054 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 40.0 | 2.52e-01 | 74.5% | 11.2% |
| 5079550 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 39.0 | 3.76e-01 | 78.4% | 63.1% |
| 3682257 | 284.1.3.9 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › WLM | 0.55 | 42.0 | 3.56e-01 | 86.3% | 48.9% |