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MH153807.1__AWN04067.1__PBI_PEREGRIN_242__00228
Bact-VirMH153807.1__AWN04067.1__PBI_PEREGRIN_242__00228
Identity
- Accession:
- MH153807 ↗
- Kingdom:
- phage
Quality
73.3
mean pLDDT
Taxonomy
TaxID: 2182361
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-97
Domain cluster:
rep: MH153807.1__AWN04079.1__PBI_PEREGRIN_254__00240__D6-88
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4fdtB00 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.64 | 45.0 | 2.98e-01 | 73.7% | 92.7% |
| 2rkhA02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.62 | 45.0 | 5.05e-01 | 75.8% | 97.4% |
| 2o62A02 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.60 | 47.0 | 4.19e-01 | 85.3% | 91.2% |
| 6htnA01 | 2.120.10.70 | Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin | 0.58 | 43.0 | 3.80e-01 | 100.0% | 54.0% |
| 3rwxA01 | 2.40.128.340 | Mainly Beta › Beta Barrel › Lipocalin › | 0.56 | 44.0 | 4.08e-01 | 83.2% | 92.5% |
| 3cm1A00 | 2.30.31.20 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB | 0.56 | 50.0 | 4.48e-01 | 100.0% | 83.8% |
| 4h0pA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.56 | 46.0 | 3.67e-01 | 91.6% | 62.7% |
| 2kr0A01 | 2.30.29.70 | Mainly Beta › Roll › PH-domain like › Proteasomal ubiquitin receptor Rpn13/ADRM1 | 0.55 | 49.0 | 4.63e-01 | 100.0% | 99.1% |
| 3mx7A00 | 2.40.128.180 | Mainly Beta › Beta Barrel › Lipocalin › | 0.55 | 45.0 | 4.59e-01 | 89.5% | 97.8% |
| 1o8vA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 43.0 | 3.86e-01 | 85.3% | 94.0% |
| 6bl6B01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.55 | 49.0 | 3.38e-01 | 98.9% | 83.2% |
| 3hrgA02 | 3.30.420.260 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Protein of unknown function DUF3822, C-terminal domain | 0.54 | 42.0 | 4.03e-01 | 93.7% | 71.9% |
| 3nuwA02 | 3.30.420.310 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 2-keto-3-deoxy-galactonokinase, C-terminal domain | 0.53 | 41.0 | 3.25e-01 | 84.2% | 82.4% |
| 1rypL00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.53 | 45.0 | 3.50e-01 | 94.7% | 66.5% |
| 1v5mA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 46.0 | 4.14e-01 | 100.0% | 86.8% |
| 3t69A02 | 3.30.420.310 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 2-keto-3-deoxy-galactonokinase, C-terminal domain | 0.52 | 39.0 | 2.99e-01 | 80.0% | 85.8% |
| 1vyfA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.52 | 40.0 | 3.65e-01 | 85.3% | 92.6% |
| 4pj2A00 | 2.40.128.460 | Mainly Beta › Beta Barrel › Lipocalin › Periplasmic lysozyme inhibitor of I-type lysozyme | 0.52 | 42.0 | 3.91e-01 | 100.0% | 70.2% |
| 1oo0A00 | 3.30.1560.10 | Alpha Beta › 2-Layer Sandwich › Mago nashi protein › Mago nashi | 0.51 | 43.0 | 3.75e-01 | 90.5% | 88.2% |
| 3lhnA00 | 2.40.128.640 | Mainly Beta › Beta Barrel › Lipocalin › | 0.51 | 42.0 | 4.10e-01 | 89.5% | 86.0% |
| 6e5bN00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.50 | 43.0 | 3.45e-01 | 96.8% | 70.9% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3508171 | 3392.1.1.1 ↗ | a+b two layers › Cytoplasmic domain of BfpC › Cytoplasmic domain of BfpC › Cytoplasmic domain of BfpC › PAP_PilO | 0.66 | 49.0 | 4.02e-01 | 93.7% | 44.2% |
| 4990438 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.63 | 42.0 | 3.81e-01 | 93.7% | 51.2% |
| 4944430 | 244.3.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU | 0.59 | 44.0 | 4.78e-01 | 92.6% | 93.8% |
| 3934185 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.58 | 45.0 | 4.05e-01 | 85.3% | 94.2% |
| 3382554 | 2484.1.1.60 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_E_G | 0.58 | 41.0 | 3.99e-01 | 87.4% | 66.7% |
| 3514476 | 220.1.1.27 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_RBD | 0.57 | 51.0 | 4.22e-01 | 100.0% | 68.6% |
| 3924550 | 4026.1.1.0 ↗ | a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) | 0.56 | 45.0 | 3.79e-01 | 85.3% | 59.4% |
| 4026653 | 220.1.1.11 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Rpn13_ADRM1_Pru | 0.55 | 48.0 | 4.66e-01 | 97.9% | 99.1% |
| 4614038 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.55 | 43.0 | 3.91e-01 | 85.3% | 94.0% |
| 185415 | 3459.1.1.1 ↗ | beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › FAIM1 | 0.55 | 45.0 | 4.59e-01 | 89.5% | 97.8% |
| 3255344 | 220.1.1.27 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_RBD | 0.55 | 47.0 | 4.37e-01 | 95.8% | 90.0% |
| 3532192 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.55 | 49.0 | 4.56e-01 | 100.0% | 95.8% |
| 4001894 | 207.1.1.24 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_8 | 0.54 | 40.0 | 2.38e-01 | 100.0% | 9.5% |
| 4380184 | 9.11.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › YdhA-like › YdhA-like › MliC | 0.53 | 43.0 | 4.47e-01 | 86.3% | 96.6% |
| 3737837 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 35.0 | 4.06e-01 | 70.5% | 98.5% |
| 4161397 | 5.1.3.48 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Gmad1 | 0.52 | 42.0 | 3.05e-01 | 89.5% | 78.0% |
| 3415471 | 277.1.1.0 ↗ | a+b two layers › PX domain › PX domain › PX domain | 0.52 | 35.0 | 3.42e-01 | 86.3% | 60.0% |
| 4114942 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.52 | 39.0 | 3.25e-01 | 81.1% | 85.1% |
| 4668044 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.52 | 42.0 | 3.73e-01 | 86.3% | 96.2% |
| 5004195 | 10.1.1.64 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › DUF2341 | 0.51 | 41.0 | 2.95e-01 | 85.3% | 53.8% |
| 3564951 | 10.1.1.23 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Neuralized | 0.51 | 39.0 | 3.12e-01 | 82.1% | 78.0% |
| 3708971 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.50 | 41.0 | 2.69e-01 | 100.0% | 19.0% |
| 3788141 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.50 | 32.0 | 3.52e-01 | 70.5% | 82.7% |