←Back to structures
MH153808.1__AWN04147.1__PBI_PETRA_34__00034
Bact-VirMH153808.1__AWN04147.1__PBI_PETRA_34__00034
Identity
- Accession:
- MH153808 ↗
- Kingdom:
- phage
Quality
82.0
mean pLDDT
Taxonomy
TaxID: 2182347
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 52-194
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2kjwA00 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.60 | 28.0 | 3.34e-01 | 93.7% | 63.5% |
| 2q18X01 | 3.10.330.40 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.55 | 26.0 | 3.72e-01 | 92.3% | 94.3% |
| 2e29A01 | 3.30.70.2280 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 29.0 | 3.71e-01 | 85.3% | 97.4% |
| 4yhxA01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.52 | 35.0 | 3.53e-01 | 90.9% | 67.4% |
| 1af5A00 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.51 | 32.0 | 3.36e-01 | 90.2% | 68.3% |
| 4v1al00 | 3.30.780.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain | 0.51 | 30.0 | 3.11e-01 | 75.5% | 58.6% |
| 2v4jB01 | 3.30.70.3340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 34.0 | 3.50e-01 | 86.7% | 71.2% |
| 3w7tA03 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.50 | 42.0 | 3.00e-01 | 91.6% | 66.7% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3163642 | 101.1.9.63 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Bro-N | 0.73 | 53.0 | 5.94e-01 | 97.2% | 96.4% |
| 4096150 | 242.1.1.6 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_WhiA | 0.60 | 38.0 | 4.00e-01 | 90.2% | 71.2% |
| 3695323 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.58 | 25.0 | 3.27e-01 | 81.1% | 70.0% |
| 3933404 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.58 | 31.0 | 3.11e-01 | 83.2% | 50.7% |
| 4061942 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.58 | 39.0 | 4.17e-01 | 83.9% | 79.2% |
| 4975759 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.55 | 38.0 | 3.52e-01 | 100.0% | 53.7% |
| 4966155 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.55 | 36.0 | 3.92e-01 | 80.4% | 80.0% |
| 4956505 | 304.57.1.0 ↗ | a+b two layers › Alpha-beta plaits › Rpp14/Pop5-like › Rpp14/Pop5-like | 0.54 | 33.0 | 3.80e-01 | 86.7% | 82.9% |
| 3705270 | 3609.1.1.3 ↗ | alpha arrays › DNA repair protein RAD4 beta-hairpin domain › DNA repair protein RAD4 beta-hairpin domain › DNA repair protein RAD4 beta-hairpin domain › Tc-38 | 0.54 | 32.0 | 3.81e-01 | 91.6% | 86.7% |
| 3738339 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.53 | 34.0 | 3.59e-01 | 90.9% | 72.0% |
| 4125256 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.53 | 45.0 | 3.41e-01 | 94.4% | 81.1% |
| 3455348 | 3696.1.1.0 ↗ | a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related | 0.52 | 34.0 | 3.81e-01 | 88.1% | 92.0% |
| 4984786 | 4956.1.1.0 ↗ | a+b two layers › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit | 0.52 | 30.0 | 3.58e-01 | 86.0% | 90.6% |
| 4203701 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.51 | 34.0 | 3.53e-01 | 83.2% | 72.1% |
| 4941427 | 304.57.1.1 ↗ | a+b two layers › Alpha-beta plaits › Rpp14/Pop5-like › Rpp14/Pop5-like › RNase_P_Rpp14 | 0.51 | 33.0 | 3.80e-01 | 87.4% | 89.5% |
| 5029637 | 304.57.1.1 ↗ | a+b two layers › Alpha-beta plaits › Rpp14/Pop5-like › Rpp14/Pop5-like › RNase_P_Rpp14 | 0.51 | 32.0 | 3.73e-01 | 72.0% | 91.0% |
| 3604040 | 304.57.1.1 ↗ | a+b two layers › Alpha-beta plaits › Rpp14/Pop5-like › Rpp14/Pop5-like › RNase_P_Rpp14 | 0.50 | 33.0 | 3.41e-01 | 74.8% | 69.4% |
| 4934750 | 304.57.1.1 ↗ | a+b two layers › Alpha-beta plaits › Rpp14/Pop5-like › Rpp14/Pop5-like › RNase_P_Rpp14 | 0.50 | 32.0 | 3.60e-01 | 72.0% | 82.7% |
| 4986705 | 304.57.1.1 ↗ | a+b two layers › Alpha-beta plaits › Rpp14/Pop5-like › Rpp14/Pop5-like › RNase_P_Rpp14 | 0.50 | 32.0 | 3.62e-01 | 73.4% | 83.6% |
D2
high
residues 203-327
Domain cluster:
rep: KU927491.1__ANM45145.1__X__00019__D60-175
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF10546.15 best | P63C | 98.4 | 4.10e-28 | 76.0% | 100.0% |