←Back to structures

MH155870.1__AWN05226.1__SEA_IBANTIK_1__00001

Bact-Vir

MH155870.1__AWN05226.1__SEA_IBANTIK_1__00001

Identity

Accession:
MH155870 ↗
Kingdom:
phage

Quality

86.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Ibantikvirus› Streptomyces_phage_Ibantik

TaxID: 2182397

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-54
PDB
Domain cluster: representative
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3sjqC00 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.82 58.0 5.01e-01 100.0% 48.8%
1rfyB00 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.77 67.0 5.52e-01 100.0% 55.7%
2a3qA00 1.10.287.1080 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like 0.69 59.0 4.56e-01 100.0% 43.4%
1rq0A01 6.10.140.160 Special › Helix non-globular › Helix Hairpins › 0.64 55.0 4.75e-01 100.0% 61.4%
4eqyA02 1.20.1180.10 Mainly Alpha › Up-down Bundle › Udp N-acetylglucosamine O-acyltransferase; Domain 2 › Udp N-acetylglucosamine O-acyltransferase, C-terminal domain 0.62 50.0 4.59e-01 100.0% 67.1%
3t57A02 1.20.1180.10 Mainly Alpha › Up-down Bundle › Udp N-acetylglucosamine O-acyltransferase; Domain 2 › Udp N-acetylglucosamine O-acyltransferase, C-terminal domain 0.61 49.0 4.37e-01 96.2% 61.3%
1ux5A03 1.20.58.2220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Formin, FH2 domain 0.61 51.0 3.32e-01 100.0% 20.5%
4zdoB00 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.59 49.0 2.88e-01 94.2% 23.8%
6tkyA03 1.20.58.740 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › DOCK DHR2 domain, lobe C 0.57 50.0 3.81e-01 100.0% 44.3%
1bl0A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.55 39.0 3.83e-01 88.5% 69.6%
6ok0B01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.55 47.0 3.64e-01 98.1% 58.8%
1p8dB00 1.10.565.10 Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor 0.54 45.0 3.02e-01 100.0% 80.8%
2wzkA01 1.20.1310.10 Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats 0.53 46.0 3.50e-01 100.0% 54.3%
4okvE00 6.10.140.1890 Special › Helix non-globular › Helix Hairpins › 0.52 42.0 4.03e-01 100.0% 81.5%
4ivfA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.51 44.0 3.48e-01 100.0% 46.6%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3290432 5086.1.1.184 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › DUF4407 0.75 65.0 5.14e-01 100.0% 49.0%
5078448 192.2.1.1 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.63 56.0 4.36e-01 100.0% 60.9%
3508862 159.1.1.1 ↗ alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › Hypothetical protein AF_0060 › MazG 0.60 43.0 3.38e-01 100.0% 37.1%
3519735 7523.1.1.0 ↗ a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II 0.60 47.0 3.36e-01 100.0% 30.0%
3172687 4033.1.1.5 ↗ alpha arrays › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA_ox_N 0.51 45.0 3.23e-01 100.0% 66.0%
3198822 2008.1.1.144 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF27653 0.50 42.0 2.71e-01 100.0% 40.0%