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MH155870.1__AWN05229.1__SEA_IBANTIK_4__00004

Bact-Vir

MH155870.1__AWN05229.1__SEA_IBANTIK_4__00004

Identity

Accession:
MH155870 ↗
Kingdom:
phage

Quality

90.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Ibantikvirus› Streptomyces_phage_Ibantik

TaxID: 2182397

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 6-71
PDB
Domain cluster: rep: OQ938586.1__WIC89769.1__SEA_SOJO_51__00051__D25-89
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3fdiB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.79 56.0 3.95e-01 72.7% 27.4%
3hdtA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.79 55.0 4.00e-01 72.7% 29.2%
2eabA02 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.62 43.0 2.58e-01 72.7% 42.5%
4kf9A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.52 41.0 3.28e-01 86.4% 50.0%
2gtaA00 1.10.287.1080 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like 0.52 37.0 3.35e-01 78.8% 62.9%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3920718 109.4.1.235 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SRP68 0.65 45.0 2.98e-01 71.2% 64.9%
5047198 101.1.11.44 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix › VAPB_antitox 0.62 43.0 4.30e-01 75.8% 98.6%
3516806 103.1.1.0 ↗ alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.58 43.0 2.81e-01 77.3% 22.5%
3811915 243.3.1.26 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › protein_MS5 0.51 38.0 3.10e-01 78.8% 59.2%