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MH155870.1__AWN05234.1__SEA_IBANTIK_9__00009
Bact-VirMH155870.1__AWN05234.1__SEA_IBANTIK_9__00009
Identity
- Accession:
- MH155870 ↗
- Kingdom:
- phage
Quality
83.8
mean pLDDT
Taxonomy
TaxID: 2182397
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-48
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4h63K00 | 1.10.287.3490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.77 | 67.0 | 5.16e-01 | 95.7% | 51.0% |
| 1li5A02 | 1.20.120.640 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.62 | 47.0 | 3.88e-01 | 84.8% | 44.8% |
| 1wmgA00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.61 | 45.0 | 3.72e-01 | 82.6% | 66.7% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3288637 | 605.1.1.4 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA_3 | 0.81 | 65.0 | 5.46e-01 | 87.0% | 56.0% |
| 5006734 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.67 | 56.0 | 3.88e-01 | 100.0% | 53.3% |
| 3231843 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.62 | 43.0 | 3.85e-01 | 82.6% | 48.0% |
D2
high
residues 51-102
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3b0cW00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.81 | 59.0 | 5.29e-01 | 98.1% | 56.2% |
| 2x1dA02 | 1.10.10.2120 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.72 | 58.0 | 5.18e-01 | 90.4% | 73.0% |
| 4a0zA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 40.0 | 3.86e-01 | 73.1% | 52.5% |
| 4eqqA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 43.0 | 4.41e-01 | 80.8% | 72.9% |
| 7s03A01 | 1.10.10.1450 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.64 | 40.0 | 4.07e-01 | 100.0% | 64.0% |
| 1x3aA00 | 1.10.3970.10 | Mainly Alpha › Orthogonal Bundle › BSD domain-like fold › BSD domain | 0.63 | 51.0 | 4.25e-01 | 96.2% | 50.0% |
| 2x2vA00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.62 | 43.0 | 3.96e-01 | 78.8% | 55.9% |
| 7essA01 | 3.30.420.140 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain | 0.56 | 48.0 | 3.62e-01 | 98.1% | 59.8% |
| 3ajmA01 | 1.10.12.70 | Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › | 0.56 | 44.0 | 4.33e-01 | 92.3% | 84.5% |
| 3fgyA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 39.0 | 2.86e-01 | 73.1% | 81.5% |
| 3wgtA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 46.0 | 3.21e-01 | 100.0% | 99.5% |
| 3vm9A02 | 6.10.140.2110 | Special › Helix non-globular › Helix Hairpins › | 0.53 | 43.0 | 4.24e-01 | 90.4% | 82.5% |
| 2i7uA00 | 6.10.250.1010 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.51 | 35.0 | 3.38e-01 | 75.0% | 79.0% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4246296 | 3826.1.1.72 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Microcin | 0.62 | 49.0 | 3.97e-01 | 90.4% | 46.7% |
| 4127245 | 152.1.2.1 ↗ | alpha arrays › RPB6/omega subunit-like › RPB6/omega subunit-like › RNA polymerase omega subunit › RNA_pol_Rpb6 | 0.60 | 52.0 | 4.83e-01 | 98.1% | 80.0% |
| 3933764 | 170.1.1.0 ↗ | alpha bundles › Retrovirus capsid protein › Retrovirus capsid protein-C › Retrovirus capsid protein-C | 0.58 | 49.0 | 4.07e-01 | 100.0% | 80.0% |
| 3942777 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 40.0 | 3.69e-01 | 92.3% | 67.9% |
| 5015091 | 148.1.3.256 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PF28529 | 0.52 | 45.0 | 3.48e-01 | 100.0% | 78.0% |