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MH155870.1__AWN05264.1__SEA_IBANTIK_40__00040
Bact-VirMH155870.1__AWN05264.1__SEA_IBANTIK_40__00040
Identity
- Accession:
- MH155870 ↗
- Kingdom:
- phage
Quality
77.7
mean pLDDT
Taxonomy
TaxID: 2182397
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 37-125
Domain cluster:
representative
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1fxkB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.83 | 58.0 | 5.35e-01 | 75.3% | 58.7% |
| 2zdiB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.78 | 55.0 | 5.14e-01 | 75.3% | 60.4% |
| 1fxkC00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.76 | 54.0 | 4.70e-01 | 74.2% | 66.2% |
| 2z0rA00 | 3.40.1350.90 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › Uncharacterised protein PF11572, DUF3234 | 0.75 | 54.0 | 5.31e-01 | 75.3% | 96.9% |
| 2zdiC00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.74 | 53.0 | 4.41e-01 | 74.2% | 60.8% |
| 1ro5A01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.70 | 50.0 | 3.98e-01 | 76.4% | 66.3% |
| 2zyzC00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.68 | 46.0 | 4.49e-01 | 70.8% | 63.5% |
| 3ajvC02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.68 | 46.0 | 4.58e-01 | 70.8% | 68.1% |
| 2ozgA02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.65 | 43.0 | 3.51e-01 | 77.5% | 36.6% |
| 2fr5A00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.65 | 45.0 | 3.90e-01 | 71.9% | 72.8% |
| 4ar9A01 | 3.40.30.160 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Collagenase ColT, N-terminal domain | 0.65 | 33.0 | 2.79e-01 | 76.4% | 31.0% |
| 3ieyB00 | 3.40.1350.150 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.64 | 44.0 | 3.71e-01 | 70.8% | 60.5% |
| 1a79A01 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.63 | 44.0 | 4.27e-01 | 73.0% | 90.0% |
| 1fc6A03 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.63 | 48.0 | 3.71e-01 | 80.9% | 52.1% |
| 1vc1A00 | 3.30.750.24 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain | 0.63 | 44.0 | 4.11e-01 | 73.0% | 61.8% |
| 2yb1A01 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.62 | 44.0 | 3.28e-01 | 71.9% | 45.0% |
| 2ookA00 | 3.40.50.10600 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SpoIIaa-like domains | 0.62 | 45.0 | 4.02e-01 | 76.4% | 80.8% |
| 4fvaC00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.62 | 43.0 | 3.12e-01 | 73.0% | 30.7% |
| 3isaB00 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.61 | 52.0 | 3.83e-01 | 94.4% | 94.6% |
| 2oivA00 | 3.40.395.10 | Alpha Beta › 3-Layer(aba) Sandwich › Adenoviral Proteinase; Chain › Adenoviral Proteinase; Chain A | 0.61 | 44.0 | 3.57e-01 | 75.3% | 64.7% |
| 4rr9A01 | 3.50.80.10 | Alpha Beta › 3-Layer(bba) Sandwich › D-tyrosyl-trna(Tyr) Deacylase; Chain: A; › D-tyrosyl-tRNA(Tyr) deacylase | 0.60 | 44.0 | 3.82e-01 | 76.4% | 74.6% |
| 3memA01 | 3.90.960.10 | Alpha Beta › Alpha-Beta Complex › YbaK protein › YbaK/aminoacyl-tRNA synthetase-associated domain | 0.60 | 42.0 | 3.55e-01 | 71.9% | 78.2% |
| 4jyjB00 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.59 | 49.0 | 3.56e-01 | 92.1% | 88.8% |
| 2ex2A02 | 3.50.80.20 | Alpha Beta › 3-Layer(bba) Sandwich › D-tyrosyl-trna(Tyr) Deacylase; Chain: A; › D-Ala-D-Ala carboxypeptidase C, peptidase S13 | 0.59 | 42.0 | 4.06e-01 | 74.2% | 70.9% |
| 3ot2A00 | 3.90.1570.10 | Alpha Beta › Alpha-Beta Complex › tt1808, chain A › tt1808, chain A | 0.59 | 41.0 | 3.32e-01 | 73.0% | 68.7% |
| 5cecA02 | 3.50.80.20 | Alpha Beta › 3-Layer(bba) Sandwich › D-tyrosyl-trna(Tyr) Deacylase; Chain: A; › D-Ala-D-Ala carboxypeptidase C, peptidase S13 | 0.59 | 43.0 | 3.59e-01 | 91.0% | 42.9% |
| 3a3dA02 | 3.50.80.20 | Alpha Beta › 3-Layer(bba) Sandwich › D-tyrosyl-trna(Tyr) Deacylase; Chain: A; › D-Ala-D-Ala carboxypeptidase C, peptidase S13 | 0.59 | 42.0 | 4.03e-01 | 74.2% | 72.5% |
| 1qy9A02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.58 | 41.0 | 3.42e-01 | 73.0% | 54.0% |
| 3kpbA00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.58 | 37.0 | 3.37e-01 | 70.8% | 47.1% |
| 4qtpD00 | 3.30.750.24 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain | 0.58 | 41.0 | 3.85e-01 | 75.3% | 58.3% |
| 3av0A01 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.57 | 39.0 | 2.88e-01 | 70.8% | 36.0% |
| 1rqeA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.57 | 40.0 | 2.86e-01 | 74.2% | 27.8% |
| 4di1B01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.55 | 44.0 | 3.45e-01 | 87.6% | 67.8% |
| 1w5dA02 | 3.50.80.20 | Alpha Beta › 3-Layer(bba) Sandwich › D-tyrosyl-trna(Tyr) Deacylase; Chain: A; › D-Ala-D-Ala carboxypeptidase C, peptidase S13 | 0.55 | 39.0 | 3.80e-01 | 75.3% | 72.5% |
| 2w00A01 | 3.90.1570.50 | Alpha Beta › Alpha-Beta Complex › tt1808, chain A › | 0.55 | 39.0 | 3.18e-01 | 74.2% | 39.8% |
| 1hf2A01 | 3.30.750.50 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › Cell-division inhibitor MinC, N-terminal domain | 0.55 | 38.0 | 3.79e-01 | 71.9% | 76.7% |
| 4c89C00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 41.0 | 2.76e-01 | 82.0% | 51.6% |
| 3rm5B01 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.51 | 38.0 | 2.66e-01 | 77.5% | 82.0% |
| 2j3lA03 | 3.90.960.10 | Alpha Beta › Alpha-Beta Complex › YbaK protein › YbaK/aminoacyl-tRNA synthetase-associated domain | 0.51 | 35.0 | 3.02e-01 | 70.8% | 80.3% |
ECOD (46)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3630462 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.84 | 45.0 | 3.77e-01 | 100.0% | 33.6% |
| 5000789 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.81 | 59.0 | 5.54e-01 | 75.3% | 64.8% |
| 3939311 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.78 | 56.0 | 5.15e-01 | 74.2% | 70.9% |
| 3229643 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.76 | 55.0 | 4.92e-01 | 75.3% | 65.0% |
| 4463557 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.75 | 54.0 | 5.27e-01 | 74.2% | 78.9% |
| 3931606 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.75 | 54.0 | 4.95e-01 | 75.3% | 70.4% |
| 3783976 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.75 | 53.0 | 5.37e-01 | 74.2% | 74.4% |
| 4027679 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.75 | 53.0 | 5.06e-01 | 74.2% | 64.8% |
| 3785619 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.74 | 53.0 | 4.85e-01 | 74.2% | 59.1% |
| 3771989 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.74 | 53.0 | 4.57e-01 | 74.2% | 50.4% |
| 4025655 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.73 | 52.0 | 5.16e-01 | 74.2% | 70.5% |
| 3710532 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.73 | 53.0 | 5.01e-01 | 75.3% | 72.4% |
| 4410759 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.73 | 53.0 | 4.85e-01 | 75.3% | 67.8% |
| 5030015 | 2492.1.1.1 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › dCMP_cyt_deam_1 | 0.73 | 59.0 | 4.67e-01 | 85.4% | 81.8% |
| 3538408 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.72 | 51.0 | 5.05e-01 | 74.2% | 78.9% |
| 4025072 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.72 | 52.0 | 4.75e-01 | 75.3% | 58.3% |
| 3174972 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.71 | 50.0 | 3.86e-01 | 73.0% | 68.2% |
| 3718200 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.71 | 51.0 | 4.52e-01 | 75.3% | 56.0% |
| 5060418 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.70 | 51.0 | 4.60e-01 | 75.3% | 59.2% |
| 4932500 | 2008.2.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo | 0.69 | 47.0 | 4.46e-01 | 71.9% | 60.0% |
| 3933404 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.68 | 54.0 | 4.45e-01 | 83.1% | 96.7% |
| 4029803 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.68 | 49.0 | 4.30e-01 | 75.3% | 56.2% |
| 4196773 | 2492.1.1.4 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.65 | 59.0 | 4.12e-01 | 96.6% | 92.5% |
| 3164821 | 2486.1.1.8 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41,DUF3340 | 0.64 | 50.0 | 3.30e-01 | 83.1% | 25.7% |
| 3674852 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.64 | 49.0 | 3.70e-01 | 80.9% | 45.8% |
| 4263877 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.64 | 49.0 | 3.78e-01 | 80.9% | 46.8% |
| 4221257 | 2492.1.1.4 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.63 | 46.0 | 3.68e-01 | 77.5% | 71.9% |
| 4512385 | 620.1.1.2 ↗ | alpha bundles › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › DinB | 0.63 | 55.0 | 4.44e-01 | 96.6% | 60.6% |
| 2439579 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.63 | 45.0 | 3.12e-01 | 75.3% | 92.4% |
| 4263412 | 620.1.1.2 ↗ | alpha bundles › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › DinB | 0.62 | 54.0 | 4.54e-01 | 96.6% | 65.2% |
| 5025828 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.61 | 44.0 | 4.15e-01 | 77.5% | 62.9% |
| 4058117 | 286.1.1.1 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › DAP_epimerase | 0.60 | 41.0 | 3.54e-01 | 70.8% | 51.4% |
| 3781316 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.60 | 44.0 | 4.02e-01 | 76.4% | 67.0% |
| 3999486 | 2496.1.1.0 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like | 0.59 | 44.0 | 4.24e-01 | 77.5% | 75.0% |
| 3284727 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.58 | 41.0 | 4.16e-01 | 74.2% | 76.7% |
| 4376563 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.58 | 40.0 | 2.93e-01 | 73.0% | 38.4% |
| 1498185 | 2496.1.1.2 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS | 0.57 | 41.0 | 3.69e-01 | 74.2% | 56.6% |
| 2323988 | 219.1.1.20 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_14 | 0.56 | 39.0 | 2.65e-01 | 70.8% | 75.6% |
| 4416332 | 327.3.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › GMP synthetase C-terminal dimerisation domain › GMP synthetase C-terminal dimerisation domain › GMP_synt_C | 0.56 | 40.0 | 3.32e-01 | 76.4% | 50.0% |
| 5043638 | 3261.1.1.0 ↗ | a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb | 0.56 | 40.0 | 4.00e-01 | 77.5% | 80.0% |
| 3867661 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.54 | 43.0 | 2.83e-01 | 88.8% | 37.9% |
| 4298327 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.54 | 38.0 | 3.47e-01 | 74.2% | 79.8% |
| 4191066 | 2005.1.1.15 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP-sulfurylase | 0.52 | 39.0 | 2.94e-01 | 78.7% | 89.5% |
| 3285521 | 327.5.1.6 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-dom_DIP2-like | 0.51 | 36.0 | 3.35e-01 | 75.3% | 79.2% |
| 5075473 | 241.6.1.2 ↗ | a+b two layers › Type III secretory system chaperone-like › Arp2/3 complex subunits › Arp2/3 complex subunits › ARPC4 | 0.51 | 43.0 | 3.53e-01 | 92.1% | 90.0% |
| 4672117 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.51 | 37.0 | 3.37e-01 | 77.5% | 84.0% |