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MH155870.1__AWN05304.1__SEA_IBANTIK_82__00080

Bact-Vir

MH155870.1__AWN05304.1__SEA_IBANTIK_82__00080

Identity

Accession:
MH155870 ↗
Kingdom:
phage

Quality

94.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Ibantikvirus› Streptomyces_phage_Ibantik

TaxID: 2182397

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 36-160
PDB
Domain cluster: rep: MT006237.1__QIG78230.1__BIBE0010001c01_00044__00044__D18-159
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2xc8A00 2.60.40.2980 Mainly Beta › Sandwich › Immunoglobulin-like › 0.70 56.0 5.73e-01 100.0% 88.4%
4l9bA01 2.60.520.10 Mainly Beta › Sandwich › Triple-stranded beta-helix › Phage fibre proteins 0.70 66.0 6.04e-01 100.0% 84.6%
1yu0A02 2.80.20.10 Mainly Beta › Trefoil › Tail fiber receptor-binding protein › Tail fiber receptor-binding protein 0.63 58.0 5.54e-01 100.0% 100.0%
5utkA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 33.0 3.96e-01 71.2% 89.2%
5e55B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 34.0 3.91e-01 70.4% 88.2%
3lb6C01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 33.0 3.78e-01 71.2% 87.5%
1tdqA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 32.0 3.69e-01 71.2% 85.6%
2pn5A03 2.60.40.1940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 34.0 3.71e-01 71.2% 82.9%
7bj4A01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.50 44.0 3.18e-01 99.2% 77.2%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5038875 4166.1.1.0 ↗ beta sandwiches › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like 0.86 66.0 6.95e-01 98.4% 87.0%
3589732 4166.1.1.2 ↗ beta sandwiches › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like › Caudo_bapla_N 0.71 67.0 6.12e-01 100.0% 80.0%
1291135 4166.1.1.0 ↗ beta sandwiches › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like 0.70 66.0 5.77e-01 100.0% 80.0%
393101 4166.1.1.3 ↗ beta sandwiches › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like › Gp22 0.69 55.0 5.54e-01 100.0% 84.3%
5053437 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.53 38.0 3.24e-01 75.2% 81.4%
3790339 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 34.0 3.71e-01 71.2% 83.0%
3857127 382.1.1.0 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.51 34.0 3.92e-01 80.8% 98.8%
3873814 382.1.1.0 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.50 32.0 3.73e-01 77.6% 94.1%
3755463 382.1.1.1 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › UPAR_LY6 0.50 34.0 3.81e-01 80.0% 94.4%
3851268 382.1.1.1 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › UPAR_LY6 0.50 33.0 3.70e-01 80.8% 88.4%
D2 high residues 216-348
PDB
Domain cluster: rep: PH2015_22_scaffold_0_prodigal-single.1__X__X__00160__D748-882
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1uokA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.74 44.0 5.54e-01 98.5% 100.0%
5brqA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.71 43.0 5.41e-01 99.2% 100.0%
3cc1A02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.70 45.0 5.40e-01 100.0% 98.9%
2dh2A02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.69 46.0 5.40e-01 100.0% 98.9%
1uasA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.68 44.0 5.29e-01 100.0% 98.9%
4nzfD02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.68 44.0 5.16e-01 100.0% 95.6%
3amkA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.67 48.0 5.44e-01 99.2% 98.0%
1ktbA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.66 44.0 5.16e-01 100.0% 98.9%
4uozA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.65 33.0 4.42e-01 97.7% 100.0%
1qwrA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.64 42.0 4.95e-01 98.5% 100.0%
4nzjA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.64 41.0 4.87e-01 100.0% 98.9%
3a5vA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.63 43.0 4.91e-01 100.0% 94.9%
3rnsA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.62 40.0 4.54e-01 90.2% 87.0%
4gioA00 2.60.40.3230 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 38.0 4.36e-01 98.5% 86.5%
2q1zB02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.60 39.0 4.53e-01 100.0% 94.6%
1je6A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 31.0 3.67e-01 90.2% 75.3%
7pjjA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 34.0 3.48e-01 95.5% 58.5%
3ia8A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 45.0 4.21e-01 88.7% 66.7%
3hqxA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.58 41.0 4.52e-01 99.2% 93.3%
3o0lA00 2.60.40.3230 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 43.0 4.68e-01 100.0% 95.4%
1bxwA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.58 48.0 4.42e-01 89.5% 89.0%
2pfwA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.58 43.0 4.61e-01 100.0% 92.8%
4j7rB03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.57 46.0 4.85e-01 100.0% 92.6%
2hx0A01 3.30.1330.80 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 0.57 42.0 4.26e-01 76.7% 84.1%
5fq0A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.56 41.0 4.46e-01 100.0% 93.6%
2ya0A03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.55 38.0 4.26e-01 100.0% 91.3%
3dwoX00 2.40.160.60 Mainly Beta › Beta Barrel › Porin › Outer membrane protein transport protein (OMPP1/FadL/TodX) 0.54 45.0 3.12e-01 88.0% 93.5%
3eqeA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 40.0 3.85e-01 91.0% 66.0%
3vl9B00 2.60.120.180 Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain 0.54 49.0 4.18e-01 100.0% 96.8%
3rnsA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 41.0 4.49e-01 100.0% 100.0%
6eheA01 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.53 43.0 3.36e-01 87.2% 62.5%
2x3aA01 2.60.40.2970 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 35.0 3.60e-01 91.0% 69.5%
1ej8A00 2.60.40.200 Mainly Beta › Sandwich › Immunoglobulin-like › Superoxide dismutase, copper/zinc binding domain 0.53 38.0 3.78e-01 100.0% 71.4%
3d37B01 2.30.300.10 Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold 0.52 31.0 2.86e-01 98.5% 44.3%
2mizA00 2.60.40.2900 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 40.0 3.80e-01 81.2% 82.1%
2ozjA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 40.0 4.32e-01 100.0% 99.1%
2jemA00 2.60.120.180 Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain 0.51 45.0 3.80e-01 100.0% 94.8%
ECOD (32)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3164980 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.81 73.0 7.48e-01 100.0% 97.7%
3906476 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.71 46.0 5.43e-01 100.0% 95.5%
4992376 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.71 40.0 5.12e-01 87.2% 97.3%
2630328 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.70 45.0 5.44e-01 100.0% 98.9%
2527942 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.70 41.0 5.21e-01 95.5% 100.0%
3397295 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.70 44.0 5.37e-01 97.7% 98.8%
1407361 12.1.1.35 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Melibiase_C 0.70 45.0 5.38e-01 100.0% 97.8%
4342481 12.1.1.35 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Melibiase_C 0.69 44.0 5.05e-01 100.0% 86.0%
1412508 12.1.1.35 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Melibiase_C 0.68 44.0 5.13e-01 100.0% 94.5%
3257228 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.67 49.0 5.50e-01 99.2% 100.0%
5000734 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.65 41.0 4.67e-01 90.2% 85.0%
1140101 12.1.1.35 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Melibiase_C 0.62 38.0 4.50e-01 100.0% 91.1%
5034022 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 38.0 3.91e-01 91.0% 63.8%
2472970 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.61 42.0 4.79e-01 100.0% 100.0%
4990612 10.12.1.0 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.61 43.0 4.64e-01 100.0% 88.2%
5073275 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.60 43.0 4.75e-01 98.5% 93.3%
1164611 10.12.1.49 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_7 0.60 39.0 4.03e-01 100.0% 69.3%
5001970 4111.1.1.2 ↗ a+b two layers › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › PCC 0.59 45.0 4.41e-01 79.7% 82.8%
4961450 4111.1.1.2 ↗ a+b two layers › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › PCC 0.59 49.0 4.88e-01 86.5% 85.9%
3586722 12.1.1.97 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › PF26741 0.58 43.0 4.69e-01 94.7% 97.1%
3680093 11.10.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.57 44.0 4.10e-01 81.2% 94.5%
3614391 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.56 40.0 4.51e-01 78.2% 99.0%
3711130 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.56 47.0 4.20e-01 90.2% 69.7%
4639307 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.54 46.0 4.20e-01 93.2% 86.7%
3264506 11.10.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.54 43.0 4.32e-01 93.2% 83.7%
3715833 11.1.1.44 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Alpha_adaptinC2 0.53 39.0 4.06e-01 93.2% 83.3%
5069369 11.1.1.103 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB 0.53 37.0 3.97e-01 98.5% 85.5%
3707901 1.1.7.7 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.53 39.0 4.26e-01 83.5% 98.1%
5046033 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.53 43.0 4.38e-01 100.0% 89.2%
3433672 11.10.1.5 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH_2 0.52 42.0 4.08e-01 93.2% 78.7%
5045152 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.51 42.0 4.36e-01 100.0% 94.4%
4961720 11.1.1.194 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CBM9_2 0.51 42.0 3.63e-01 92.5% 81.8%
D3 medium residues 163-211
PDB
Domain cluster: representative
CATH (62)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ej9A01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.72 60.0 4.15e-01 100.0% 66.5%
6o38A04 2.60.120.1230 Mainly Beta › Sandwich › Jelly Rolls › 0.72 62.0 5.13e-01 100.0% 79.8%
6mzoA01 3.40.50.11970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.72 63.0 4.66e-01 100.0% 53.2%
2kksA00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.71 60.0 4.40e-01 100.0% 39.7%
2cs0A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.71 59.0 4.82e-01 95.9% 52.6%
2gsbA01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.71 58.0 4.97e-01 95.9% 60.7%
6pxcA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.70 59.0 4.71e-01 98.0% 53.8%
1jg1A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.70 59.0 3.94e-01 100.0% 25.6%
2kcqA00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.69 59.0 4.24e-01 100.0% 39.2%
3lbfA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.69 59.0 3.93e-01 100.0% 56.5%
2ci8A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.69 57.0 5.53e-01 95.9% 89.3%
2ablA02 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.69 56.0 4.60e-01 95.9% 51.5%
1ayaA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.69 57.0 4.55e-01 95.9% 51.5%
2eo6A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.68 55.0 4.38e-01 93.9% 49.1%
2knoA01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.68 57.0 4.47e-01 95.9% 60.0%
1nrvA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.68 57.0 4.57e-01 95.9% 52.0%
1xa6A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.68 57.0 4.56e-01 100.0% 64.4%
1evlA02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.67 58.0 4.51e-01 100.0% 72.3%
2crhA01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.67 54.0 4.41e-01 95.9% 50.0%
2gk4A00 3.40.50.10300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › CoaB-like 0.67 57.0 3.72e-01 100.0% 25.3%
2pbfA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.67 56.0 3.74e-01 100.0% 61.5%
2dx0A00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.66 55.0 4.22e-01 95.9% 48.7%
2wjwA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.66 57.0 3.98e-01 100.0% 30.7%
3us4A00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.65 54.0 4.40e-01 95.9% 51.5%
2q8kA01 3.90.230.10 Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily 0.65 56.0 3.49e-01 100.0% 89.5%
1rjaA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.65 53.0 4.41e-01 100.0% 54.0%
3a32A02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.65 55.0 4.07e-01 100.0% 66.7%
3tavA00 3.90.230.10 Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily 0.65 55.0 3.51e-01 100.0% 95.8%
1rpyB00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.65 52.0 4.47e-01 95.9% 62.8%
1i3zA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.64 52.0 4.23e-01 95.9% 49.5%
2c9wA01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.64 51.0 4.03e-01 93.9% 44.2%
1ym5A02 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.63 52.0 3.78e-01 100.0% 48.7%
3q41B02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.63 53.0 3.72e-01 100.0% 27.8%
5fl3A01 3.30.450.90 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.63 48.0 3.81e-01 83.7% 95.0%
2lw7A02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.62 52.0 4.08e-01 100.0% 70.2%
3ho6B00 3.40.50.11050 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › MARTX cysteine protease (CPD) domain 0.61 50.0 3.33e-01 100.0% 41.8%
2hd9A00 3.10.590.10 Alpha Beta › Roll › ph1033 like fold › ph1033 like domains 0.61 50.0 3.74e-01 100.0% 69.7%
5e3iA02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.61 53.0 4.25e-01 100.0% 86.9%
3hutA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.61 51.0 3.64e-01 95.9% 33.3%
2izvA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.60 50.0 3.59e-01 100.0% 31.9%
1ym5A01 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.60 50.0 3.79e-01 100.0% 61.8%
4j3cA01 2.40.240.20 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 0.59 51.0 4.70e-01 98.0% 100.0%
1u0kA02 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.59 45.0 3.34e-01 89.8% 45.0%
3v76A02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.59 40.0 3.31e-01 71.4% 38.9%
3om0A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.59 48.0 3.51e-01 100.0% 38.7%
1qe0A02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.59 50.0 4.18e-01 100.0% 89.0%
8oh5B01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.59 37.0 3.05e-01 100.0% 31.6%
3rbtD01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.58 46.0 3.58e-01 93.9% 64.8%
5xilA02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.58 47.0 3.65e-01 100.0% 73.4%
1nj1A02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.58 46.0 3.82e-01 100.0% 82.7%
2mp1A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.57 44.0 3.83e-01 85.7% 62.3%
1g5hB02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.57 45.0 3.72e-01 100.0% 81.3%
4wi1A02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.57 45.0 3.58e-01 100.0% 71.5%
1zj8A03 3.30.413.10 Alpha Beta › 2-Layer Sandwich › Sulfite Reductase Hemoprotein; domain 1 › Sulfite Reductase Hemoprotein, domain 1 0.57 47.0 3.41e-01 100.0% 31.5%
2i4lB02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.56 44.0 3.74e-01 100.0% 82.2%
5hkeA01 3.60.60.10 Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A 0.56 44.0 2.81e-01 95.9% 20.2%
1tm0A01 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.55 42.0 3.18e-01 98.0% 56.1%
1httA02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.55 44.0 3.73e-01 100.0% 83.7%
3i45A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 45.0 3.20e-01 100.0% 32.2%
6euaA01 3.90.215.10 Alpha Beta › Alpha-Beta Complex › Gamma Fibrinogen; Chain A, domain 1 › Gamma Fibrinogen, chain A, domain 1 0.55 40.0 3.13e-01 89.8% 54.0%
4gdxB00 3.60.20.40 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Gamma-glutamyltranspeptidase, small (S) subunit 0.54 42.0 3.03e-01 100.0% 49.2%
2i9wA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 39.0 2.72e-01 83.7% 77.8%
ECOD (74)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4488523 2003.6.1.5 ↗ a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › Phos_pyr_kin 0.74 63.0 3.92e-01 100.0% 23.5%
4972514 2492.1.1.18 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB 0.71 61.0 4.47e-01 100.0% 40.7%
136190 2492.1.1.18 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB 0.71 60.0 4.47e-01 100.0% 42.0%
3956284 2492.1.1.18 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB 0.71 61.0 4.39e-01 100.0% 40.7%
4284604 2003.1.5.4 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PCMT 0.70 59.0 3.89e-01 100.0% 52.6%
5079388 7502.1.1.0 ↗ a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS 0.70 60.0 4.07e-01 100.0% 43.7%
3732125 286.1.1.2 ↗ a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF 0.69 59.0 4.10e-01 100.0% 43.9%
133840 2492.1.1.18 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB 0.69 59.0 4.30e-01 100.0% 41.4%
3820410 2003.1.5.4 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PCMT 0.69 58.0 3.70e-01 100.0% 48.9%
3755862 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.69 56.0 4.64e-01 95.9% 53.7%
None — 0.68 58.0 3.83e-01 100.0% 24.5%
3414351 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.68 57.0 4.01e-01 100.0% 48.0%
4639069 2003.1.5.153 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PCMT, Methyltransf_25 0.68 58.0 3.89e-01 100.0% 59.5%
4871885 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.68 55.0 4.51e-01 95.9% 51.5%
4044230 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.68 54.0 3.75e-01 93.9% 27.8%
3518621 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.68 55.0 4.20e-01 95.9% 40.8%
3801699 214.1.1.0 ↗ a+b two layers › SH2 › SH2 › SH2 0.67 56.0 4.41e-01 98.0% 47.3%
158833 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.67 54.0 4.04e-01 95.9% 37.0%
3502261 214.1.1.10 ↗ a+b two layers › SH2 › SH2 › SH2 › DUF7145 0.67 56.0 4.17e-01 98.0% 45.9%
4303964 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.67 56.0 5.06e-01 95.9% 94.3%
3842643 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.67 55.0 4.21e-01 98.0% 52.0%
4964131 2003.1.1.51 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DFP 0.67 57.0 3.85e-01 100.0% 29.7%
3874674 214.1.1.7 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2_1 0.67 53.0 4.08e-01 93.9% 44.0%
4623713 286.1.1.2 ↗ a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF 0.66 54.0 3.95e-01 98.0% 47.1%
3414808 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.66 54.0 4.18e-01 95.9% 42.5%
3933443 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.66 54.0 4.91e-01 95.9% 72.9%
3511271 214.1.1.10 ↗ a+b two layers › SH2 › SH2 › SH2 › DUF7145 0.65 55.0 4.25e-01 98.0% 54.8%
3472650 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.65 53.0 4.01e-01 95.9% 39.2%
3802041 2007.1.2.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.65 57.0 3.76e-01 100.0% 29.5%
3512463 214.1.1.10 ↗ a+b two layers › SH2 › SH2 › SH2 › DUF7145 0.65 53.0 4.10e-01 95.9% 40.0%
3905081 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.65 51.0 3.94e-01 93.9% 40.0%
3508125 214.1.1.9 ↗ a+b two layers › SH2 › SH2 › SH2 › DUF7063 0.65 52.0 4.16e-01 95.9% 45.5%
4978876 286.1.1.2 ↗ a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF 0.65 53.0 3.81e-01 95.9% 46.9%
3780130 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.65 52.0 3.97e-01 95.9% 41.5%
3746947 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.65 53.0 4.17e-01 95.9% 46.4%
3780015 214.1.1.0 ↗ a+b two layers › SH2 › SH2 › SH2 0.65 51.0 3.67e-01 93.9% 30.7%
4353619 7502.1.1.1 ↗ a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.64 54.0 4.39e-01 98.0% 81.8%
3628065 214.1.1.0 ↗ a+b two layers › SH2 › SH2 › SH2 0.64 51.0 3.69e-01 93.9% 31.2%
3513932 214.1.1.10 ↗ a+b two layers › SH2 › SH2 › SH2 › DUF7145 0.64 54.0 4.22e-01 100.0% 53.9%
3253803 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.64 52.0 4.38e-01 95.9% 58.9%
3995638 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.64 51.0 3.93e-01 95.9% 37.7%
3793075 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.64 51.0 3.84e-01 93.9% 37.0%
3512674 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.64 52.0 3.89e-01 95.9% 37.8%
3545796 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.64 51.0 4.07e-01 98.0% 42.6%
3547031 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.64 51.0 4.09e-01 98.0% 43.4%
3264176 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.64 51.0 3.94e-01 95.9% 42.4%
3938726 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.63 51.0 4.18e-01 98.0% 48.6%
3276831 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.63 50.0 4.22e-01 91.8% 54.4%
3947985 3761.1.1.0 ↗ beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related 0.63 52.0 4.77e-01 100.0% 77.1%
3557314 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.63 50.0 3.82e-01 95.9% 36.3%
3225772 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.63 50.0 4.01e-01 98.0% 43.5%
3903512 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.63 52.0 4.01e-01 100.0% 48.0%
3219023 214.1.1.0 ↗ a+b two layers › SH2 › SH2 › SH2 0.63 51.0 4.19e-01 98.0% 52.0%
3926576 1.1.9.33 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_NSUN2 0.63 51.0 4.47e-01 95.9% 92.5%
3883097 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.62 49.0 4.57e-01 98.0% 70.0%
3516336 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.62 49.0 3.79e-01 95.9% 37.7%
3957593 286.1.1.2 ↗ a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF 0.61 50.0 3.69e-01 98.0% 51.7%
3389857 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.61 48.0 3.68e-01 98.0% 35.0%
4527022 2003.1.2.16 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 0.61 51.0 3.05e-01 100.0% 36.4%
5045741 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.60 45.0 4.15e-01 83.7% 76.9%
3967701 286.1.1.2 ↗ a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF 0.60 48.0 3.49e-01 93.9% 43.8%
4991488 2007.1.2.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.59 51.0 3.60e-01 100.0% 32.7%
5034699 286.1.1.2 ↗ a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF 0.59 46.0 3.42e-01 95.9% 46.5%
5052715 268.1.1.0 ↗ a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related 0.58 44.0 3.32e-01 85.7% 42.3%
3542657 2007.1.2.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.58 46.0 3.27e-01 100.0% 29.5%
3393174 7502.1.1.1 ↗ a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.57 46.0 3.70e-01 100.0% 80.0%
4174440 7502.1.1.1 ↗ a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.57 47.0 3.88e-01 95.9% 86.3%
4932715 7502.1.1.1 ↗ a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.57 46.0 3.51e-01 100.0% 63.0%
4240279 7502.1.1.1 ↗ a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.56 45.0 3.65e-01 100.0% 68.7%
3964560 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 38.0 3.50e-01 71.4% 62.9%
4107412 7502.1.1.1 ↗ a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.56 43.0 3.82e-01 95.9% 94.1%
3526900 269.1.1.0 ↗ a+b complex topology › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like 0.53 41.0 2.55e-01 98.0% 20.7%
3784988 1.1.9.33 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_NSUN2 0.53 42.0 3.59e-01 100.0% 83.2%
3600535 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.51 41.0 2.45e-01 100.0% 36.1%