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MH160767.1__AWN06534.1__vBEcoMRo157c2YLVW_00003__00003

Bact-Vir

MH160767.1__AWN06534.1__vBEcoMRo157c2YLVW_00003__00003

Identity

Accession:
MH160767 ↗
Kingdom:
phage

Quality

82.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-105
PDB
Domain cluster: representative
CATH (49)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3tlqA00 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.91 87.0 6.44e-01 100.0% 44.5%
6hq7B02 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.84 79.0 5.75e-01 100.0% 48.1%
4lj3A00 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.83 78.0 5.70e-01 100.0% 45.7%
3sy8C02 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.83 78.0 5.72e-01 100.0% 46.0%
4q6jB00 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.82 77.0 5.68e-01 100.0% 45.3%
3s83A00 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.82 76.0 5.59e-01 100.0% 46.5%
2r6oA00 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.82 76.0 5.57e-01 100.0% 46.1%
5xgbA03 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.80 75.0 5.55e-01 100.0% 48.6%
6pwkA02 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.79 72.0 5.52e-01 100.0% 49.8%
2basB01 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.79 72.0 5.55e-01 100.0% 51.3%
3hv8A00 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.79 73.0 5.45e-01 100.0% 47.5%
4hu4A00 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.78 73.0 5.42e-01 100.0% 48.6%
3pfmA00 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.76 70.0 5.26e-01 100.0% 47.7%
4f3hA00 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.75 68.0 5.15e-01 100.0% 48.2%
3kzpA00 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.75 66.0 5.10e-01 99.0% 44.2%
5yrpA00 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.74 63.0 4.80e-01 99.0% 42.0%
4hwgA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.64 42.0 3.70e-01 91.4% 44.6%
2bo4A01 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.64 38.0 3.15e-01 83.8% 32.8%
3pfnD01 3.40.50.10330 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Probable inorganic polyphosphate/atp-NAD kinase; domain 1 0.64 36.0 3.20e-01 83.8% 37.1%
4nesA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.63 43.0 3.72e-01 89.5% 44.8%
4l80D00 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.62 46.0 3.24e-01 99.0% 24.4%
4qysA02 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.61 39.0 4.00e-01 97.1% 65.4%
2pn2A00 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.61 38.0 3.51e-01 75.2% 47.4%
2ekgA02 3.20.20.220 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 0.61 50.0 3.86e-01 98.1% 39.1%
6f2xA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.61 37.0 3.33e-01 84.8% 42.4%
5hj9A00 3.40.800.10 Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Ureohydrolase domain 0.60 51.0 3.68e-01 94.3% 86.8%
3ftbA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.60 44.0 3.49e-01 100.0% 36.9%
7drdG01 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.59 45.0 3.34e-01 100.0% 32.1%
2afbB00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.58 46.0 3.29e-01 85.7% 84.4%
1fuyB01 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.58 38.0 3.32e-01 96.2% 42.1%
2vp8B00 3.20.20.20 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like 0.58 40.0 3.08e-01 98.1% 31.4%
5tnvA00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.58 51.0 3.71e-01 100.0% 35.6%
1mxiA00 3.40.1280.10 Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain 0.57 34.0 2.97e-01 84.8% 38.5%
2ok8A02 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.57 46.0 4.16e-01 91.4% 95.4%
1qydA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 46.0 3.83e-01 89.5% 80.6%
7toiA01 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.56 48.0 3.81e-01 94.3% 74.0%
2h29A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.56 44.0 3.61e-01 83.8% 68.6%
5karA01 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.55 49.0 3.33e-01 100.0% 31.5%
3oidC00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 47.0 3.64e-01 97.1% 70.2%
4dgfA00 3.30.750.24 Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain 0.54 40.0 3.88e-01 100.0% 68.9%
2xioA00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.53 46.0 3.37e-01 97.1% 42.0%
1iayA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.52 44.0 3.34e-01 91.4% 55.2%
3vkhA08 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 44.0 3.06e-01 92.4% 33.9%
3nb0B02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.52 43.0 3.34e-01 92.4% 43.9%
5ul3A01 3.40.50.280 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain 0.52 43.0 3.82e-01 92.4% 76.3%
1auaA01 3.40.525.10 Alpha Beta › 3-Layer(aba) Sandwich › Phosphatidylinositol Transfer Protein Sec14p › CRAL-TRIO lipid binding domain 0.52 46.0 3.68e-01 100.0% 53.5%
2w3pA02 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.51 45.0 3.54e-01 99.0% 57.4%
3bleA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.51 43.0 3.17e-01 95.2% 40.7%
1pzxB01 3.40.50.10440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dihydroxyacetone kinase; domain 1 0.51 38.0 3.65e-01 93.3% 68.0%
ECOD (69)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3505892 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.95 91.0 6.64e-01 100.0% 43.3%
3948087 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.95 87.0 6.46e-01 100.0% 43.5%
3984789 2002.5.1.0 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain 0.94 90.0 6.64e-01 100.0% 44.7%
2028208 2002.5.1.0 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain 0.91 76.0 5.86e-01 99.0% 43.1%
1051116 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.91 87.0 6.44e-01 100.0% 44.5%
3967205 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.86 81.0 5.90e-01 100.0% 46.7%
3983390 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.85 80.0 5.71e-01 100.0% 42.2%
3971399 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.85 79.0 5.78e-01 100.0% 45.0%
3943475 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.84 79.0 5.89e-01 100.0% 47.1%
3290182 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.84 78.0 5.70e-01 100.0% 44.2%
3980075 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.84 79.0 5.65e-01 100.0% 42.7%
3942084 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.84 79.0 6.03e-01 100.0% 47.7%
4009640 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.84 78.0 5.70e-01 100.0% 45.8%
3978364 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.83 78.0 5.60e-01 100.0% 41.5%
4008426 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.83 78.0 5.70e-01 100.0% 45.3%
2520636 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.83 77.0 5.63e-01 100.0% 47.0%
3966569 2002.5.1.0 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain 0.83 77.0 5.76e-01 100.0% 47.3%
3941800 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.83 78.0 5.74e-01 100.0% 45.2%
3280039 2002.5.1.0 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain 0.83 78.0 4.97e-01 100.0% 26.8%
3977635 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.83 77.0 5.73e-01 100.0% 47.3%
3977807 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.82 77.0 6.27e-01 100.0% 63.9%
1148315 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.82 77.0 5.69e-01 100.0% 46.8%
1289504 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.82 77.0 5.68e-01 100.0% 45.3%
4542302 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.82 77.0 5.57e-01 100.0% 45.7%
1140806 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.82 77.0 5.59e-01 100.0% 44.8%
3967298 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.82 77.0 5.62e-01 100.0% 45.1%
3972991 2002.5.1.0 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain 0.82 76.0 5.58e-01 100.0% 45.0%
4007436 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.82 76.0 5.61e-01 100.0% 45.1%
3510441 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.81 76.0 5.54e-01 100.0% 44.6%
153585 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.81 75.0 5.51e-01 100.0% 45.2%
370101 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.81 75.0 5.52e-01 100.0% 46.0%
3973893 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.81 76.0 5.52e-01 100.0% 45.4%
3981350 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.81 75.0 5.45e-01 100.0% 42.0%
4206079 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.81 75.0 5.62e-01 100.0% 50.0%
9010 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.79 72.0 5.35e-01 100.0% 45.1%
4054365 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.78 73.0 5.43e-01 100.0% 44.9%
4329040 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.76 49.0 3.54e-01 86.7% 24.6%
868894 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.75 68.0 5.05e-01 100.0% 45.1%
137563 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.75 66.0 5.10e-01 99.0% 44.2%
4242923 7510.1.1.3 a/b three-layered sandwiches › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › FA_synthesis 0.71 44.0 3.82e-01 82.9% 40.6%
3674449 2003.1.2.164 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NmrA 0.67 38.0 4.20e-01 85.7% 69.4%
5042480 7512.1.1.8 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Epimerase_2 0.66 44.0 3.86e-01 91.4% 45.2%
5079730 7512.1.1.3 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.66 43.0 3.62e-01 91.4% 39.4%
4969553 7512.1.1.8 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Epimerase_2 0.65 43.0 3.69e-01 88.6% 41.8%
4972365 7512.1.1.8 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Epimerase_2 0.64 43.0 3.73e-01 91.4% 43.6%
3676335 2006.1.1.54 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase, PhoLip_ATPase_C 0.62 44.0 3.56e-01 91.4% 37.1%
5011292 7512.1.1.3 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.61 37.0 3.24e-01 89.5% 38.8%
3313971 7512.1.1.1 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDPGT 0.60 39.0 3.07e-01 89.5% 29.8%
4632177 3255.1.1.1 a/b three-layered sandwiches › a/b domain in flagellar biosynthesis protein flhA › a/b domain in flagellar biosynthesis protein flhA › a/b domain in flagellar biosynthesis protein flhA › FHIPEP 0.59 42.0 4.43e-01 90.5% 83.2%
5075853 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.59 42.0 3.55e-01 91.4% 44.0%
146911 7584.1.1.0 a/b three-layered sandwiches › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins 0.58 48.0 3.59e-01 97.1% 34.5%
3718590 7579.1.1.14 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase_3 0.58 52.0 3.52e-01 99.0% 28.3%
4953301 300.1.1.18 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › FilR1_middle 0.57 42.0 3.67e-01 100.0% 50.6%
5017064 2007.1.8.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Uroporphyrinogen III synthase (U3S, HemD) › HEM4 0.56 43.0 4.04e-01 81.9% 73.8%
3189096 2484.1.1.7 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ribosomal_S11 0.55 43.0 4.06e-01 96.2% 68.5%
3319917 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.55 46.0 3.49e-01 93.3% 46.2%
5003159 2002.3.1.3 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Glyco_hydro_57 0.54 43.0 3.18e-01 86.7% 34.6%
5004742 2496.1.1.2 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS 0.54 48.0 4.31e-01 100.0% 84.7%
4954404 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.54 44.0 3.63e-01 89.5% 52.0%
4961538 2002.1.1.256 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MSH_C 0.54 46.0 3.09e-01 95.2% 31.4%
3968490 2484.6.1.1 mixed a+b and a/b › Ribonuclease H-like › Periplasmic domain of ExbD/TolR › Periplasmic domain of ExbD/TolR › ExbD 0.54 40.0 4.28e-01 90.5% 98.8%
4968344 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.53 45.0 3.40e-01 94.3% 46.5%
996606 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.53 45.0 3.39e-01 95.2% 48.4%
4169888 101.1.1.539 alpha arrays › HTH › HTH › Three-helical HTH › DUF434 0.53 45.0 3.68e-01 95.2% 52.0%
3812402 2002.1.1.19 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_17 0.52 46.0 3.75e-01 100.0% 52.2%
3352386 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.51 43.0 3.31e-01 97.1% 37.1%
5073821 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.51 45.0 3.70e-01 100.0% 92.0%
3295624 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.51 42.0 3.22e-01 97.1% 34.8%
5077698 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.50 41.0 3.15e-01 89.5% 59.2%
D2 medium residues 106-193
PDB
Domain cluster: representative
CATH (36)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3tlqA00 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.83 77.0 5.51e-01 100.0% 47.0%
6hq7B02 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.77 70.0 4.94e-01 100.0% 43.1%
3gfzB02 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.75 67.0 4.81e-01 100.0% 44.5%
5yrpA00 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.74 67.0 4.93e-01 100.0% 50.4%
3pfmA00 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.74 67.0 4.84e-01 100.0% 45.7%
2r6oA00 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.74 66.0 4.73e-01 100.0% 43.8%
5xgbA03 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.72 66.0 4.71e-01 100.0% 45.4%
3sy8C02 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.72 64.0 4.64e-01 100.0% 44.8%
2basB01 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.72 63.0 4.71e-01 100.0% 38.5%
6pwkA02 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.72 64.0 4.74e-01 100.0% 47.2%
1y65A00 3.20.20.300 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase, family 3, N-terminal domain 0.71 64.0 4.31e-01 100.0% 39.7%
4lj3A00 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.71 62.0 4.51e-01 100.0% 44.1%
3md9A02 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.66 48.0 4.25e-01 77.3% 81.8%
3qtgA01 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.66 59.0 4.31e-01 100.0% 54.2%
3tevB00 3.20.20.300 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase, family 3, N-terminal domain 0.66 58.0 4.01e-01 100.0% 55.7%
2etvA02 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.66 48.0 3.73e-01 77.3% 74.6%
5c54G00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.66 58.0 4.01e-01 100.0% 41.0%
2lleA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.65 58.0 4.25e-01 100.0% 54.3%
4wjmA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.64 58.0 3.93e-01 100.0% 53.2%
4pagA03 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.64 48.0 4.60e-01 80.7% 94.2%
1vm7B00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.64 57.0 3.95e-01 100.0% 47.5%
7fc0E01 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.64 55.0 4.04e-01 100.0% 42.9%
3eccA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 54.0 4.46e-01 97.7% 64.2%
8bc3B01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.62 55.0 4.18e-01 100.0% 52.3%
5yscA02 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.62 45.0 3.94e-01 76.1% 78.0%
1fo1B00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.62 52.0 4.31e-01 95.5% 50.9%
3bgvD00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.60 52.0 3.80e-01 100.0% 80.6%
3a06B01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.60 45.0 3.90e-01 98.9% 50.4%
3lhsA01 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.59 41.0 3.81e-01 71.6% 84.3%
1ba3A02 3.40.50.980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.58 50.0 4.05e-01 98.9% 61.3%
3no3A00 3.20.20.190 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase 0.56 49.0 3.67e-01 100.0% 45.8%
5d6nA00 3.40.50.12780 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain 0.55 47.0 3.07e-01 100.0% 36.7%
4gvpA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 48.0 3.72e-01 100.0% 49.5%
4xb1A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 46.0 3.72e-01 97.7% 90.8%
3tovA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.54 43.0 3.54e-01 86.4% 47.9%
3u4qA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 39.0 2.99e-01 80.7% 83.3%
ECOD (51)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3942084 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.85 80.0 5.78e-01 100.0% 48.6%
1051116 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.83 77.0 5.51e-01 100.0% 47.0%
3984789 2002.5.1.0 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain 0.83 77.0 5.50e-01 100.0% 47.2%
2028208 2002.5.1.0 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain 0.82 76.0 5.62e-01 100.0% 50.2%
4542302 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.81 75.0 5.19e-01 100.0% 41.5%
3973893 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.79 72.0 5.05e-01 100.0% 42.7%
4217979 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.77 70.0 5.02e-01 100.0% 46.3%
4008577 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.77 69.0 4.90e-01 100.0% 43.0%
3971399 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.76 69.0 4.91e-01 100.0% 43.5%
3290182 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.76 69.0 4.88e-01 100.0% 44.2%
3283883 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.76 69.0 4.85e-01 100.0% 41.9%
3980075 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.76 69.0 4.82e-01 100.0% 41.2%
3950176 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.76 69.0 4.84e-01 100.0% 41.9%
3981350 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.76 69.0 4.84e-01 100.0% 42.0%
4007436 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.76 69.0 4.87e-01 100.0% 44.3%
4206079 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.76 68.0 4.94e-01 100.0% 47.1%
3945302 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.75 68.0 4.84e-01 100.0% 43.5%
3280039 2002.5.1.0 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain 0.75 68.0 4.29e-01 100.0% 25.7%
3982385 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.75 68.0 4.83e-01 100.0% 43.5%
3972453 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.75 69.0 4.76e-01 100.0% 40.6%
3966569 2002.5.1.0 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain 0.75 68.0 4.87e-01 100.0% 46.1%
4008426 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.74 67.0 4.75e-01 100.0% 43.4%
3505892 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.73 68.0 4.82e-01 100.0% 44.1%
3977088 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.73 66.0 4.75e-01 100.0% 45.4%
3942767 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.73 65.0 5.11e-01 100.0% 59.5%
4009640 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.73 65.0 4.67e-01 100.0% 42.7%
1148315 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.72 65.0 4.68e-01 100.0% 45.6%
5076797 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.69 54.0 4.53e-01 86.4% 55.5%
2051708 2007.1.14.5 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › Peripla_BP_2 0.67 49.0 4.21e-01 77.3% 80.4%
None 0.66 60.0 4.33e-01 100.0% 55.8%
2066961 2002.1.1.43 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › His_biosynth 0.65 58.0 5.24e-01 98.9% 95.9%
4033280 2002.1.1.38 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TAL_FSA 0.65 57.0 4.36e-01 100.0% 52.9%
5082975 2002.1.1.83 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 0.64 57.0 3.96e-01 100.0% 35.8%
4638898 2002.1.1.66 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHquinase_I 0.63 55.0 4.19e-01 100.0% 52.3%
4981987 2002.1.1.83 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 0.63 56.0 3.77e-01 100.0% 31.0%
3185090 2002.1.1.106 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.62 55.0 4.01e-01 100.0% 40.4%
3550235 2007.1.3.34 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › PDE8A_N 0.62 55.0 4.64e-01 100.0% 72.0%
4034345 2002.1.1.43 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › His_biosynth 0.61 53.0 3.99e-01 100.0% 52.6%
5074200 7592.1.1.0 a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains 0.60 50.0 4.05e-01 92.0% 56.6%
5015644 247.1.1.1 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B 0.60 52.0 3.83e-01 100.0% 86.8%
3735708 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.56 49.0 4.05e-01 100.0% 75.2%
3250680 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.56 49.0 3.86e-01 100.0% 54.4%
None 0.56 48.0 2.89e-01 100.0% 36.8%
4945353 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.55 48.0 3.94e-01 98.9% 89.4%
4482083 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.55 48.0 3.23e-01 100.0% 30.0%
4417525 2003.1.1.33 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DXP_reductoisom 0.53 46.0 3.79e-01 98.9% 84.7%
4944906 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.53 47.0 3.79e-01 100.0% 78.3%
5013998 2004.1.1.76 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 0.52 44.0 3.42e-01 100.0% 45.6%
5075891 247.1.1.1 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B 0.51 45.0 3.17e-01 100.0% 32.7%
4194688 7526.1.1.1 a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 0.50 39.0 3.66e-01 86.4% 87.8%
4324611 2008.1.1.166 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RE_XcyI 0.50 40.0 2.79e-01 97.7% 24.8%