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MH179470.1__AWH14551.1__X__00049

Bact-Vir

MH179470.1__AWH14551.1__X__00049

Identity

Accession:
MH179470 ↗
Kingdom:
phage

Quality

69.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 21-75
PDB
Domain cluster: representative
CATH (38)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1p9rA01 3.30.450.90 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.63 49.0 4.07e-01 92.7% 72.1%
3oc4B01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.61 48.0 3.41e-01 89.1% 81.9%
2gtiA01 3.30.160.820 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Nsp15 N-terminal domain-like 0.61 45.0 4.31e-01 80.0% 82.8%
2ewvA01 3.30.450.90 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.60 48.0 4.07e-01 92.7% 81.4%
1w1hD00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 50.0 3.88e-01 100.0% 49.6%
2re3B03 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.58 33.0 3.85e-01 80.0% 100.0%
3aiiA03 2.40.240.10 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P 0.57 37.0 3.21e-01 81.8% 40.4%
4hhvA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 47.0 3.99e-01 100.0% 70.9%
4cbvA02 2.40.50.1020 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › LytTr DNA-binding domain 0.57 45.0 3.70e-01 94.5% 58.5%
2d9tA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 44.0 4.58e-01 100.0% 100.0%
3u50C01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 43.0 3.46e-01 89.1% 60.6%
4xtvB02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.57 42.0 4.37e-01 100.0% 93.8%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 41.0 3.87e-01 100.0% 63.0%
1ylxA00 3.30.70.1480 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GK1464-like 0.56 39.0 3.30e-01 76.4% 49.5%
3d6wB01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 43.0 4.05e-01 89.1% 97.1%
7fh5A01 2.60.120.330 Mainly Beta › Sandwich › Jelly Rolls › B-lactam Antibiotic, Isopenicillin N Synthase; Chain 0.56 41.0 2.67e-01 81.8% 35.6%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 41.0 3.95e-01 100.0% 71.9%
2lezA00 3.30.2450.10 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › Secreted effector protein pipB2 0.55 44.0 3.56e-01 94.5% 45.8%
2basA03 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.55 42.0 3.40e-01 87.3% 67.2%
6e55A01 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.54 46.0 4.27e-01 100.0% 90.5%
5bn3A03 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.53 37.0 3.60e-01 74.5% 90.8%
4chjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 43.0 3.49e-01 100.0% 59.7%
6pwkA02 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.53 39.0 2.66e-01 83.6% 29.0%
3p54A02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.53 44.0 4.14e-01 100.0% 76.1%
3ifvC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.53 39.0 2.71e-01 87.3% 37.5%
2dy1A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 45.0 2.89e-01 100.0% 33.8%
5ejrA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 43.0 3.91e-01 100.0% 80.0%
4m7xA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.52 38.0 3.34e-01 81.8% 70.3%
1mbmA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.52 37.0 3.43e-01 80.0% 89.5%
1xteA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.51 37.0 3.08e-01 81.8% 76.7%
2dmoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 42.0 4.04e-01 100.0% 85.3%
1vwxk00 3.30.720.90 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.51 39.0 3.74e-01 92.7% 82.6%
3p0cA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.50 37.0 3.16e-01 87.3% 80.2%
1fxkB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.50 35.0 2.91e-01 94.5% 37.6%
2fn0B00 3.60.120.10 Alpha Beta › 4-Layer Sandwich › Anthranilate synthase › Anthranilate synthase 0.50 37.0 2.33e-01 85.5% 83.5%
1efzA00 3.20.20.105 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Queuine tRNA-ribosyltransferase-like 0.50 40.0 2.52e-01 90.9% 79.3%
2hzmA02 2.20.140.20 Mainly Beta › Single Sheet › q64v53_bacfr protein fold › 0.50 42.0 3.72e-01 100.0% 95.3%
2it9A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.50 37.0 3.12e-01 90.9% 90.0%
ECOD (43)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3430385 4099.1.1.1 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › MAD 0.65 45.0 3.49e-01 72.7% 36.8%
3403345 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.65 55.0 3.90e-01 100.0% 42.7%
4931303 802.1.1.1 a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 › BFN_dom 0.64 52.0 4.56e-01 92.7% 69.4%
3388463 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.63 54.0 4.08e-01 100.0% 54.5%
4152656 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.62 50.0 2.78e-01 92.7% 7.6%
3403082 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.61 52.0 3.62e-01 100.0% 37.4%
4528719 4.1.1.438 beta barrels › SH3 › SH3 › SH3 › PF27440 0.61 51.0 4.89e-01 100.0% 93.8%
4444947 7502.1.1.1 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.61 41.0 3.44e-01 70.9% 76.8%
5012802 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 43.0 3.68e-01 92.7% 44.2%
4177200 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.60 45.0 4.53e-01 100.0% 87.3%
3944244 2.4.1.3 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2,OB_MalK 0.59 47.0 3.65e-01 92.7% 38.5%
3485965 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 46.0 4.55e-01 100.0% 83.3%
4646256 2004.1.1.997 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_15, AAA_23, AAA_27 0.59 49.0 2.86e-01 96.4% 76.2%
5008718 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.59 49.0 2.93e-01 96.4% 70.2%
5072132 331.10.2.0 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase 0.59 38.0 3.49e-01 70.9% 46.3%
3941391 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 43.0 4.23e-01 83.6% 75.0%
4559371 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 47.0 4.60e-01 100.0% 82.5%
3502828 394.1.1.1 few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 0.58 39.0 4.07e-01 80.0% 78.0%
3402929 394.1.1.1 few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 0.58 40.0 4.02e-01 81.8% 72.7%
3502826 394.1.1.1 few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 0.57 39.0 4.03e-01 80.0% 78.0%
4410774 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.56 44.0 3.62e-01 92.7% 57.4%
3740923 4.1.1.107 beta barrels › SH3 › SH3 › SH3 › XRN1_D1 0.56 46.0 3.35e-01 100.0% 59.4%
4959053 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.56 42.0 3.99e-01 87.3% 68.6%
3239418 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 43.0 2.97e-01 92.7% 74.8%
4032324 219.1.1.6 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 0.55 38.0 2.53e-01 74.5% 15.8%
3518927 394.1.1.1 few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 0.54 36.0 3.88e-01 94.5% 86.7%
3501557 394.1.1.1 few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 0.54 36.0 3.80e-01 70.9% 82.0%
3931199 394.1.1.1 few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 0.54 36.0 3.89e-01 94.5% 86.7%
4943214 896.1.1.0 a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related 0.54 40.0 3.86e-01 89.1% 78.6%
3590812 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.53 40.0 3.92e-01 87.3% 98.3%
3750184 1170.1.1.1 beta barrels › IL8-related › IL8-related › IL8 › IL8 0.53 41.0 3.83e-01 92.7% 72.0%
3878271 101.1.2.284 alpha arrays › HTH › HTH › winged helix domain › WAC_Acf1_DNA_bd 0.52 40.0 3.06e-01 100.0% 32.3%
4010317 4.1.1.395 beta barrels › SH3 › SH3 › SH3 › PF27398 0.52 40.0 3.95e-01 100.0% 81.5%
3801719 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.52 41.0 3.91e-01 96.4% 85.7%
3520970 2484.1.1.1 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.51 39.0 2.86e-01 92.7% 35.4%
3519125 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.51 37.0 3.83e-01 100.0% 92.0%
4583465 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.51 36.0 3.73e-01 98.2% 90.0%
4174179 4.8.1.5 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.51 38.0 3.88e-01 87.3% 100.0%
3898170 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.50 41.0 3.82e-01 100.0% 93.3%
3264176 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.50 40.0 3.15e-01 90.9% 63.2%
1693005 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.50 36.0 3.26e-01 83.6% 73.0%
4307219 4.8.1.5 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.50 39.0 3.93e-01 94.5% 100.0%
3883895 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.50 41.0 3.52e-01 100.0% 73.0%
D2 high residues 86-182
PDB
Domain cluster: representative
CATH (54)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1fntc01 1.20.120.180 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Proteasome activator pa28, C-terminal domain 0.74 65.0 5.14e-01 93.8% 89.9%
4kb2A01 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.74 57.0 5.49e-01 80.4% 90.8%
4l8iB00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.71 56.0 5.33e-01 83.5% 92.9%
1st6A04 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.69 60.0 5.68e-01 95.9% 99.1%
2yevA03 1.20.120.80 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c oxidase, subunit III, four-helix bundle 0.69 62.0 5.03e-01 100.0% 77.7%
4zvaA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.67 54.0 4.64e-01 85.6% 85.9%
1nzeA00 1.20.120.290 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Oxygen-evolving enhancer protein 3 (PsbQ), four-helix up-down bundle 0.67 59.0 5.68e-01 100.0% 93.8%
4uiqB00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.66 53.0 4.56e-01 86.6% 86.3%
1sxjB03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.65 53.0 5.49e-01 96.9% 92.4%
3h0dB02 1.10.1200.150 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Transcriptional repressor of class III stress genes, C-terminal domain 0.65 48.0 5.17e-01 97.9% 93.8%
1orjD00 1.20.120.340 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS 0.64 56.0 5.22e-01 100.0% 92.8%
3hn2A02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.64 46.0 4.23e-01 91.8% 57.0%
4k0dA00 1.20.120.1730 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.64 56.0 4.98e-01 100.0% 79.7%
4l7nA01 1.20.142.10 Mainly Alpha › Up-down Bundle › Poly(ADP-ribose) Polymerase; domain 1 › Poly(ADP-ribose) polymerase, regulatory domain 0.64 46.0 4.11e-01 100.0% 52.4%
3onjA00 1.20.58.400 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins 0.63 50.0 5.03e-01 83.5% 96.9%
2ib0A01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.62 46.0 4.18e-01 79.4% 93.3%
3ieeA02 1.20.58.820 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Uncharacterised protein PF12889, C-terminal DUF3829 0.62 52.0 5.17e-01 95.9% 99.0%
8st7C01 1.10.4140.10 Mainly Alpha › Orthogonal Bundle › effector protein (NleL) fold › effector protein (NleL) 0.62 52.0 4.16e-01 100.0% 44.7%
2ra1A01 1.20.58.790 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.62 46.0 4.66e-01 79.4% 94.9%
4hwdD00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.62 46.0 4.82e-01 80.4% 93.3%
1sxjE03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.61 51.0 5.12e-01 96.9% 90.7%
3vkgB03 1.20.58.1120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dynein motor heavy chain, linker domain, subdomain 4 0.61 54.0 4.65e-01 100.0% 80.1%
1m62A00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.61 46.0 4.82e-01 80.4% 90.8%
3m9vA03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.61 43.0 3.70e-01 73.2% 66.9%
3zh9B03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.61 53.0 4.83e-01 94.8% 92.9%
4wzxA01 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.61 42.0 4.68e-01 76.3% 93.3%
2l1lB00 1.20.1440.250 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 0.60 41.0 3.81e-01 78.4% 53.5%
2iiuA00 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.60 52.0 4.16e-01 100.0% 95.2%
3nvoB02 1.20.58.340 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region 0.59 45.0 4.28e-01 81.4% 87.1%
1wgwA00 1.20.120.140 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain 0.59 46.0 4.61e-01 95.9% 82.8%
1yozA00 1.10.3200.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af0941 › AF0941-like 0.59 47.0 4.49e-01 84.5% 73.5%
4egwA02 1.20.58.340 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region 0.59 44.0 4.20e-01 81.4% 87.4%
7ae2A01 1.20.120.580 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › bsu32300-like 0.59 51.0 4.62e-01 100.0% 94.2%
1t72A01 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.59 45.0 4.29e-01 82.5% 84.6%
2hjmA01 1.20.120.460 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › protein pf1176 like 0.58 42.0 4.38e-01 78.4% 84.9%
1hciA04 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.58 43.0 4.17e-01 80.4% 85.1%
4fgmA02 1.10.390.10 Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 0.58 46.0 3.36e-01 86.6% 43.3%
3rkgA02 1.20.58.340 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region 0.58 43.0 3.67e-01 79.4% 72.6%
1t33A02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.58 45.0 3.93e-01 85.6% 65.8%
3snhA02 1.20.120.1240 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Dynamin, middle domain 0.57 50.0 3.93e-01 99.0% 83.8%
2khmA01 1.10.10.1350 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Spidroin domain, C-terminal domain 0.57 38.0 3.76e-01 90.7% 62.0%
3doeB00 1.20.1520.10 Mainly Alpha › Up-down Bundle › Adp-ribosylation factor-like protein 2-binding protein fold › ADP-ribosylation factor-like 2-binding protein, domain 0.56 46.0 4.37e-01 88.7% 85.1%
6o0aA01 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.56 44.0 3.86e-01 84.5% 85.2%
5g5gA02 1.10.150.120 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › [2Fe-2S]-binding domain 0.56 37.0 3.87e-01 89.7% 73.3%
1gcvA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.56 42.0 3.79e-01 81.4% 94.3%
7y3eA01 1.20.1530.20 Mainly Alpha › Up-down Bundle › Na+/H+ antiporter like fold › 0.55 49.0 3.27e-01 100.0% 55.8%
2a9uA01 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.55 40.0 3.70e-01 75.3% 58.7%
2odvA01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.54 41.0 4.00e-01 83.5% 91.1%
3cx5A02 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.54 41.0 3.16e-01 80.4% 67.7%
4u7iA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.54 41.0 4.17e-01 81.4% 98.9%
1q59A00 1.10.437.10 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like 0.53 40.0 3.31e-01 78.4% 47.1%
1e2aA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.53 40.0 4.01e-01 82.5% 90.2%
3nrhA00 1.20.120.1550 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Protein of unknown function DUF5063 0.52 47.0 4.03e-01 100.0% 79.7%
2pbxA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.51 43.0 3.52e-01 96.9% 57.9%
ECOD (58)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3390092 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.78 71.0 6.39e-01 100.0% 96.9%
3856031 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.74 68.0 6.21e-01 100.0% 92.8%
3602354 1030.1.1.1 alpha duplicates or obligate multimers › Crispr-associated protein Csm2 › Crispr-associated protein Csm2 › Crispr-associated protein Csm2 › Csm2_III-A 0.74 62.0 5.78e-01 100.0% 74.2%
1036846 310.2.1.1 a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF 0.74 58.0 5.38e-01 82.5% 86.7%
3372974 3684.1.1.2 alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › BPS1 0.73 65.0 4.76e-01 100.0% 65.4%
4431838 3281.1.1.1 alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M 0.73 65.0 4.10e-01 97.9% 25.5%
3347110 3684.1.1.2 alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › BPS1 0.72 64.0 4.81e-01 100.0% 60.5%
5030859 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.71 63.0 5.88e-01 100.0% 79.2%
4949854 601.18.1.0 alpha bundles › Four-helical up-and-down bundle › Oxygen-evolving enhancer protein 3 › Oxygen-evolving enhancer protein 3 0.71 63.0 5.99e-01 100.0% 84.1%
3939708 601.24.1.0 alpha bundles › Four-helical up-and-down bundle › FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) › FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) 0.71 62.0 5.97e-01 96.9% 97.3%
3291574 192.29.1.248 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › PF27150 0.69 61.0 5.69e-01 100.0% 85.6%
3273757 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.69 61.0 5.83e-01 97.9% 97.4%
3463576 3684.1.1.2 alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › BPS1 0.69 61.0 4.74e-01 100.0% 63.6%
3647455 633.4.1.0 alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor 0.69 51.0 4.27e-01 78.4% 49.7%
3921784 3684.1.1.27 alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › ApoL 0.69 61.0 4.76e-01 100.0% 79.1%
3646445 3615.1.1.38 alpha bundles › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › ROH1-like 0.68 61.0 4.23e-01 100.0% 68.3%
3479213 601.28.1.0 alpha bundles › Four-helical up-and-down bundle › VPS28 C-terminal domain-like › VPS28 C-terminal domain-like 0.68 55.0 5.47e-01 96.9% 83.5%
3801950 3755.4.1.0 alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.67 58.0 4.56e-01 100.0% 44.9%
3725456 604.3.1.24 alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › PF27980 0.67 50.0 5.26e-01 78.4% 98.8%
5017330 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 45.0 4.16e-01 90.7% 53.6%
4501305 601.4.1.3 alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains › 4HB_MCP_1 0.67 59.0 5.03e-01 100.0% 73.1%
3755299 196.1.1.0 alpha bundles › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS 0.66 55.0 4.89e-01 97.9% 62.9%
3818491 601.18.1.1 alpha bundles › Four-helical up-and-down bundle › Oxygen-evolving enhancer protein 3 › Oxygen-evolving enhancer protein 3 › PsbQ 0.66 60.0 5.21e-01 100.0% 70.3%
4006018 601.33.1.1 alpha bundles › Four-helical up-and-down bundle › CHAD domain › CHAD domain › CHAD 0.66 54.0 5.40e-01 97.9% 87.0%
5082279 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.66 59.0 5.50e-01 100.0% 92.5%
4998695 601.4.1.0 alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains 0.66 58.0 5.48e-01 100.0% 88.3%
3865367 196.1.1.0 alpha bundles › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS 0.65 54.0 4.12e-01 97.9% 38.3%
3655427 601.18.1.1 alpha bundles › Four-helical up-and-down bundle › Oxygen-evolving enhancer protein 3 › Oxygen-evolving enhancer protein 3 › PsbQ 0.65 58.0 5.23e-01 100.0% 76.9%
3610234 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.65 49.0 4.74e-01 80.4% 92.7%
3368348 604.3.1.1 alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › BAG 0.64 48.0 4.33e-01 79.4% 58.5%
3931393 632.1.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain 0.64 44.0 4.10e-01 71.1% 63.2%
3236002 5054.1.1.59 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans, Ion_trans_2 0.64 56.0 4.16e-01 100.0% 49.3%
3739320 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.64 48.0 3.76e-01 80.4% 70.5%
3353903 601.28.1.1 alpha bundles › Four-helical up-and-down bundle › VPS28 C-terminal domain-like › VPS28 C-terminal domain-like › VPS28 0.64 56.0 5.44e-01 100.0% 87.3%
3200734 633.21.1.0 alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 0.64 48.0 4.02e-01 79.4% 80.6%
3341807 604.3.1.1 alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › BAG 0.63 47.0 4.57e-01 79.4% 74.5%
4974646 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.63 57.0 5.55e-01 100.0% 95.2%
3828970 604.3.1.1 alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › BAG 0.62 48.0 4.92e-01 82.5% 87.4%
3513671 601.33.1.0 alpha bundles › Four-helical up-and-down bundle › CHAD domain › CHAD domain 0.62 54.0 5.41e-01 100.0% 95.9%
3838013 150.1.1.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin 0.62 56.0 4.58e-01 100.0% 61.7%
3425261 622.4.1.33 alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related › DUF4220 0.62 53.0 3.96e-01 97.9% 55.2%
3212257 601.33.1.10 alpha bundles › Four-helical up-and-down bundle › CHAD domain › CHAD domain › DUF19 0.62 45.0 4.42e-01 76.3% 73.3%
3724303 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.61 53.0 4.71e-01 100.0% 87.6%
3907213 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.60 45.0 4.54e-01 82.5% 97.0%
4946612 601.7.1.0 alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain 0.60 52.0 5.01e-01 100.0% 98.3%
4017916 371.1.1.3 few secondary structure elements › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 › Phospholip_A2_3 0.60 45.0 4.03e-01 85.6% 55.2%
3463947 633.4.1.1 alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI 0.59 48.0 4.17e-01 87.6% 69.3%
3209353 4121.1.1.0 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.59 46.0 3.03e-01 82.5% 26.3%
4427252 3831.1.1.1 alpha bundles › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › LprI 0.59 40.0 3.98e-01 71.1% 93.3%
3401257 192.15.1.92 alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › TRC8_N 0.58 51.0 4.69e-01 100.0% 92.3%
3624382 601.42.1.0 alpha bundles › Four-helical up-and-down bundle › Helical bundle in ROQ domain › Helical bundle in ROQ domain 0.58 47.0 4.08e-01 92.8% 69.1%
4331100 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.58 43.0 4.33e-01 79.4% 89.5%
4056158 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.57 43.0 4.14e-01 79.4% 79.1%
3504102 109.4.1.155 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Med23 0.55 47.0 3.66e-01 93.8% 49.3%
4967072 5067.1.1.12 alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › UPF0014 0.55 44.0 3.64e-01 89.7% 59.5%
3398541 109.4.1.1492 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_SCC3-SA, PF31007 0.54 45.0 2.91e-01 89.7% 52.3%
3838292 1079.1.1.5 alpha complex topology › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Transmembrane reductase CcdA › DsbD_2 0.53 45.0 3.51e-01 94.8% 87.0%
3839376 1075.1.2.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX 0.52 43.0 3.70e-01 92.8% 91.4%