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MH179480.1__AWH15472.1__X__00040
Bact-VirMH179480.1__AWH15472.1__X__00040
Identity
- Accession:
- MH179480 ↗
- Kingdom:
- phage
Quality
65.4
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Schitoviridae›
Littlefixvirus›
Pseudomonas_phage_98PfluR60PP
TaxID: 2163965
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 38-110
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7dwqL01 | 1.20.1240.10 | Mainly Alpha › Up-down Bundle › Photosystem 1 Reaction Centre Subunit Xi; Chain: L; › Photosystem I PsaL, reaction centre subunit XI | 0.71 | 55.0 | 4.59e-01 | 83.6% | 83.2% |
| 1iurA01 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.63 | 45.0 | 4.78e-01 | 75.3% | 96.8% |
| 1dn1B00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 46.0 | 3.27e-01 | 84.9% | 67.6% |
| 5f2kB02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.57 | 39.0 | 2.86e-01 | 72.6% | 23.8% |
| 2a3qA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.56 | 44.0 | 3.88e-01 | 86.3% | 77.9% |
| 4ljiB00 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.56 | 41.0 | 3.47e-01 | 79.5% | 96.9% |
| 2ce0A00 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.54 | 41.0 | 3.73e-01 | 82.2% | 98.0% |
| 7odyC01 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.54 | 43.0 | 3.96e-01 | 97.3% | 68.5% |
| 2gtaA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.53 | 45.0 | 4.11e-01 | 93.2% | 84.5% |
| 2qkdA04 | 2.60.120.1040 | Mainly Beta › Sandwich › Jelly Rolls › ZPR1, A/B domain | 0.52 | 36.0 | 3.01e-01 | 71.2% | 50.4% |
| 3whjA00 | 6.10.140.1710 | Special › Helix non-globular › Helix Hairpins › | 0.52 | 42.0 | 3.70e-01 | 89.0% | 82.0% |
| 1mhyG01 | 1.20.1280.10 | Mainly Alpha › Up-down Bundle › Monooxygenase › Methane monooxygenase, gamma chain, domain 1 | 0.52 | 39.0 | 4.06e-01 | 86.3% | 97.1% |
| 2hzdA00 | 6.10.20.40 | Special › Helix non-globular › Arc Repressor Mutant, subunit A › TEA/ATTS domain | 0.51 | 42.0 | 4.10e-01 | 94.5% | 95.1% |
| 4m5bA00 | 1.10.1760.20 | Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › | 0.51 | 42.0 | 3.16e-01 | 97.3% | 33.6% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3383985 | 529.1.1.0 ↗ | few secondary structure elements › Anaphylotoxins (complement system) › Anaphylotoxins (complement system) › Anaphylotoxins (complement system) | 0.71 | 55.0 | 5.01e-01 | 82.2% | 80.0% |
| 3649776 | 109.4.1.330 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › BIG2_C | 0.64 | 46.0 | 3.06e-01 | 75.3% | 40.0% |
| 3649468 | 192.29.1.54 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › BPS1 | 0.63 | 45.0 | 3.16e-01 | 75.3% | 70.6% |
| 3677217 | 109.4.1.330 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › BIG2_C | 0.63 | 43.0 | 2.73e-01 | 72.6% | 13.7% |
| 3919051 | 109.54.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › Utp12 | 0.61 | 42.0 | 3.15e-01 | 72.6% | 27.2% |
| 3567972 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.61 | 45.0 | 3.66e-01 | 79.5% | 86.4% |
| 4169514 | 5050.1.1.54 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Mntp | 0.60 | 48.0 | 3.61e-01 | 89.0% | 84.9% |
| 3717642 | 109.4.1.1204 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF3336 | 0.55 | 39.0 | 3.43e-01 | 75.3% | 60.0% |
| 3554599 | 159.1.2.4 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › MazG-like | 0.55 | 43.0 | 3.71e-01 | 87.7% | 71.2% |
| 5047538 | 159.1.1.0 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › Hypothetical protein AF_0060 | 0.53 | 38.0 | 3.41e-01 | 78.1% | 75.5% |
| 4028746 | 10.28.1.1 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in Zinc finger protein ZPR1 › Jelly-roll domain in Zinc finger protein ZPR1 › jr-ZPR1 | 0.51 | 35.0 | 2.74e-01 | 71.2% | 51.2% |