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MH183162.1__AWN07715.1__PBI_HENDRIX_44__00044
Bact-VirMH183162.1__AWN07715.1__PBI_HENDRIX_44__00044
Identity
- Accession:
- MH183162 ↗
- Kingdom:
- phage
Quality
56.3
mean pLDDT
Taxonomy
TaxID: 2182341
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 80-127
Domain cluster:
representative
CATH (35)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1owfA00 | 4.10.520.10 | Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins | 0.75 | 51.0 | 4.11e-01 | 83.3% | 36.5% |
| 2yqzA02 | 1.10.8.900 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.74 | 58.0 | 5.23e-01 | 87.5% | 95.6% |
| 2isnB00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.73 | 58.0 | 3.50e-01 | 89.6% | 56.2% |
| 5t8uB01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.71 | 50.0 | 3.18e-01 | 93.8% | 14.3% |
| 4gh9A01 | 1.10.8.950 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Filoviridae VP35, C-terminal inhibitory domain, helical subdomain | 0.69 | 49.0 | 4.42e-01 | 79.2% | 52.9% |
| 3bniB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.69 | 58.0 | 4.04e-01 | 100.0% | 80.7% |
| 2xzmV01 | 1.10.60.20 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Ribosomal protein S17 | 0.68 | 47.0 | 4.49e-01 | 77.1% | 62.3% |
| 1e94A00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.68 | 55.0 | 3.76e-01 | 91.7% | 34.5% |
| 2vxdA00 | 1.10.10.2100 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Nucleophosmin, C-terminal domain | 0.67 | 45.0 | 4.36e-01 | 75.0% | 61.1% |
| 3hl6A02 | 1.20.58.700 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.66 | 55.0 | 4.29e-01 | 97.9% | 92.2% |
| 3fkeA01 | 1.10.8.950 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Filoviridae VP35, C-terminal inhibitory domain, helical subdomain | 0.66 | 47.0 | 4.25e-01 | 81.2% | 53.5% |
| 2i53A02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.66 | 50.0 | 3.93e-01 | 87.5% | 39.6% |
| 3keyA01 | 1.10.10.1080 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Stn1, N-terminal wHTH domain | 0.65 | 55.0 | 4.56e-01 | 95.8% | 98.9% |
| 2gwlA00 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.65 | 52.0 | 3.50e-01 | 93.8% | 73.0% |
| 1i5nB00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.65 | 51.0 | 3.89e-01 | 89.6% | 72.6% |
| 3dd9D02 | 6.10.140.2060 | Special › Helix non-globular › Helix Hairpins › | 0.65 | 46.0 | 4.77e-01 | 81.2% | 92.7% |
| 3w04A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.64 | 48.0 | 3.08e-01 | 85.4% | 17.4% |
| 1oksA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.63 | 44.0 | 4.36e-01 | 77.1% | 84.9% |
| 2a2jA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.62 | 49.0 | 3.33e-01 | 91.7% | 24.1% |
| 2rsvA00 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.61 | 51.0 | 3.06e-01 | 100.0% | 47.6% |
| 1icrA00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.61 | 46.0 | 3.12e-01 | 89.6% | 22.2% |
| 3aleA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.60 | 47.0 | 3.46e-01 | 91.7% | 41.3% |
| 3bf7A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.60 | 48.0 | 3.05e-01 | 91.7% | 40.0% |
| 6tmfT00 | 1.10.60.20 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Ribosomal protein S17 | 0.60 | 42.0 | 3.98e-01 | 79.2% | 60.9% |
| 2lahA00 | 1.25.40.430 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.60 | 49.0 | 3.58e-01 | 100.0% | 49.4% |
| 4hteA03 | 1.10.167.30 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › | 0.59 | 52.0 | 4.38e-01 | 97.9% | 60.0% |
| 4rz2B00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 49.0 | 3.11e-01 | 93.8% | 75.0% |
| 2l6jA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.59 | 45.0 | 3.43e-01 | 83.3% | 36.0% |
| 2ig3A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.58 | 44.0 | 3.38e-01 | 87.5% | 33.1% |
| 3h11A00 | 3.40.50.1460 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.57 | 46.0 | 3.17e-01 | 100.0% | 24.1% |
| 3qkaE02 | 1.10.287.2460 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.55 | 39.0 | 4.07e-01 | 83.3% | 90.7% |
| 6b8hO01 | 1.10.520.20 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0.55 | 40.0 | 3.27e-01 | 81.2% | 87.9% |
| 3o2iA00 | 3.30.70.2710 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 43.0 | 3.56e-01 | 91.7% | 47.3% |
| 1iurA01 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.54 | 41.0 | 3.87e-01 | 87.5% | 73.0% |
| 3u9rB02 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.54 | 42.0 | 2.73e-01 | 93.8% | 26.2% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3979831 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.85 | 60.0 | 5.41e-01 | 75.0% | 55.4% |
| 4431428 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.77 | 62.0 | 4.89e-01 | 87.5% | 97.9% |
| 5074284 | 101.1.17.1 ↗ | alpha arrays › HTH › HTH › FF domain › Ribosomal_S17e | 0.76 | 56.0 | 4.35e-01 | 79.2% | 41.0% |
| 4507639 | 102.1.2.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › DNA-glycosylase | 0.76 | 61.0 | 5.30e-01 | 91.7% | 64.0% |
| 4644692 | 4953.2.1.0 ↗ | beta barrels › L-aspartase C-terminal domain-like › Lid-like insertion of Propionyl-CoA synthase (PCS) ligase domain › Lid-like insertion of Propionyl-CoA synthase (PCS) ligase domain | 0.75 | 59.0 | 5.04e-01 | 91.7% | 54.1% |
| 3471776 | 524.1.1.1 ↗ | alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p › RabGAP-TBC | 0.75 | 57.0 | 3.82e-01 | 83.3% | 22.2% |
| 165681 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.74 | 58.0 | 3.65e-01 | 87.5% | 37.9% |
| 4965580 | 4953.2.1.0 ↗ | beta barrels › L-aspartase C-terminal domain-like › Lid-like insertion of Propionyl-CoA synthase (PCS) ligase domain › Lid-like insertion of Propionyl-CoA synthase (PCS) ligase domain | 0.74 | 58.0 | 4.96e-01 | 91.7% | 56.5% |
| 3394135 | 108.1.1.73 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 | 0.74 | 60.0 | 4.97e-01 | 93.8% | 60.0% |
| 3961618 | 181.1.1.1 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N | 0.73 | 54.0 | 5.07e-01 | 81.2% | 68.3% |
| None | — | 0.71 | 56.0 | 4.24e-01 | 89.6% | 36.6% | |
| 3723053 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.70 | 56.0 | 3.49e-01 | 91.7% | 62.1% |
| 3166525 | 5.1.4.569 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Rrn6_HB | 0.70 | 53.0 | 3.92e-01 | 85.4% | 38.5% |
| 5023675 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.69 | 49.0 | 3.51e-01 | 72.9% | 30.8% |
| 5038136 | 101.1.16.1 ↗ | alpha arrays › HTH › HTH › Ribosomal protein L11, C-terminal domain › Ribosomal_L11 | 0.67 | 55.0 | 4.75e-01 | 100.0% | 71.8% |
| 4021185 | 101.1.17.0 ↗ | alpha arrays › HTH › HTH › FF domain | 0.67 | 47.0 | 3.51e-01 | 79.2% | 27.9% |
| 3301021 | 397.3.1.0 ↗ | few secondary structure elements › Toxic hairpin › Pollen allergen ole e 6 › Pollen allergen ole e 6 | 0.66 | 45.0 | 4.88e-01 | 83.3% | 97.1% |
| 3659168 | 148.1.3.205 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_At3g28540 | 0.66 | 46.0 | 3.84e-01 | 79.2% | 38.9% |
| 4670167 | 547.1.1.1 ↗ | alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › GlutR_dimer | 0.65 | 49.0 | 3.85e-01 | 83.3% | 38.2% |
| 4994428 | 101.1.17.1 ↗ | alpha arrays › HTH › HTH › FF domain › Ribosomal_S17e | 0.65 | 46.0 | 4.25e-01 | 81.2% | 57.1% |
| 4978129 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.64 | 49.0 | 2.89e-01 | 85.4% | 19.5% |
| 5027329 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.64 | 48.0 | 4.38e-01 | 91.7% | 66.7% |
| 3832740 | 3567.1.1.16 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer › DUF4110 | 0.63 | 48.0 | 4.06e-01 | 89.6% | 67.8% |
| 3700622 | 7579.1.1.6 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 | 0.63 | 52.0 | 3.24e-01 | 100.0% | 37.8% |
| 4952303 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.63 | 51.0 | 3.37e-01 | 87.5% | 31.4% |
| None | — | 0.63 | 50.0 | 3.13e-01 | 97.9% | 43.4% | |
| 3911059 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 45.0 | 4.27e-01 | 89.6% | 63.3% |
| 4356696 | 101.1.17.1 ↗ | alpha arrays › HTH › HTH › FF domain › Ribosomal_S17e | 0.62 | 45.0 | 4.13e-01 | 83.3% | 58.6% |
| 3678066 | 101.1.11.40 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › DUF1677 | 0.62 | 44.0 | 3.96e-01 | 77.1% | 88.6% |
| 4522775 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.62 | 45.0 | 2.96e-01 | 83.3% | 20.4% |
| 3961236 | 4120.1.1.41 ↗ | few secondary structure elements › Tim10/DDP › Tim10/DDP › Tim10/DDP › Transposase_mut | 0.61 | 45.0 | 4.14e-01 | 85.4% | 61.4% |
| 3467405 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 48.0 | 3.51e-01 | 89.6% | 62.9% |
| 3808291 | 7579.1.1.42 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Hydrolase_4 | 0.59 | 46.0 | 2.96e-01 | 97.9% | 23.3% |
| 3612313 | 109.4.1.17 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Cullin | 0.58 | 49.0 | 3.72e-01 | 100.0% | 97.7% |
| 3255248 | 101.35.1.0 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX | 0.58 | 41.0 | 3.78e-01 | 95.8% | 55.7% |
| 3545977 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.56 | 44.0 | 4.01e-01 | 93.8% | 94.3% |
| 3897379 | 568.1.1.0 ↗ | few secondary structure elements › p8-MTCP1-related › p8-MTCP1-related › p8-MTCP1-related | 0.55 | 47.0 | 3.26e-01 | 95.8% | 32.1% |
| 5047497 | 1045.1.1.0 ↗ | alpha bundles › Rad50-binding domain of Mre11 › Rad50-binding domain of Mre11 › Rad50-binding domain of Mre11 | 0.54 | 37.0 | 3.57e-01 | 79.2% | 56.9% |
| 3725302 | 101.1.2.381 ↗ | alpha arrays › HTH › HTH › winged helix domain › UBR1-like_wing | 0.53 | 40.0 | 3.16e-01 | 85.4% | 82.7% |
| 3274899 | 604.9.1.0 ↗ | alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 | 0.53 | 41.0 | 4.00e-01 | 100.0% | 78.3% |
| 3732311 | 3985.1.1.0 ↗ | alpha bundles › CFEM domain (contains eight cysteines) › CFEM domain (contains eight cysteines) › CFEM domain (contains eight cysteines) | 0.53 | 46.0 | 3.45e-01 | 100.0% | 44.0% |
D2
medium
residues 194-244