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MH183162.1__AWN07811.1__PBI_HENDRIX_140__00141
Bact-VirMH183162.1__AWN07811.1__PBI_HENDRIX_140__00141
Identity
- Accession:
- MH183162 ↗
- Kingdom:
- phage
Quality
61.6
mean pLDDT
Taxonomy
TaxID: 2182341
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 8-63
Domain cluster:
rep: KR063280.1__AKL88365.1__GMA6_84__00084__D9-54
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF24623.3 best | Phage_zn_bind_8 | 38.0 | 1.50e-09 | 98.2% | 63.2% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1lnwF01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 44.0 | 3.46e-01 | 85.7% | 76.6% |
| 1i72A00 | 3.60.90.10 | Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase | 0.54 | 35.0 | 2.30e-01 | 100.0% | 14.7% |
| 2pb2B01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.52 | 40.0 | 3.07e-01 | 87.5% | 43.0% |
| 2kqrA01 | 3.30.1910.20 | Alpha Beta › 2-Layer Sandwich › so0334 like fold › asparaginyl-tRNA synthetase, N-terminal domain | 0.52 | 42.0 | 3.94e-01 | 96.4% | 97.3% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4583759 | 3382.1.1.1 ↗ | alpha arrays › Protein Wnt-8 › Protein Wnt-8 › Protein Wnt-8 › wnt | 0.58 | 50.0 | 3.16e-01 | 100.0% | 35.0% |
| 3784535 | 109.4.1.1973 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF28685 | 0.55 | 39.0 | 2.25e-01 | 75.0% | 11.4% |
| 3788152 | 171.1.1.0 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like | 0.55 | 43.0 | 3.27e-01 | 89.3% | 86.9% |
| 4978597 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.54 | 38.0 | 2.70e-01 | 91.1% | 22.2% |
| 4995729 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.54 | 45.0 | 2.98e-01 | 92.9% | 25.5% |
| 3281159 | 4107.1.1.1 ↗ | alpha arrays › Jann2411-like › Jann2411-like › Jann2411-like › ABATE,zf-CGNR | 0.53 | 37.0 | 2.66e-01 | 75.0% | 67.9% |
| 3626429 | 101.1.1.20 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CPSF_A | 0.52 | 41.0 | 3.57e-01 | 100.0% | 85.7% |
| 3596821 | 4268.2.1.0 ↗ | alpha duplicates or obligate multimers › EspA/CesA-like › EspA chaperone CesA › EspA chaperone CesA | 0.52 | 39.0 | 3.20e-01 | 87.5% | 41.7% |
| 3838723 | 821.1.1.0 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.51 | 36.0 | 2.73e-01 | 78.6% | 48.5% |
| 3786027 | 2004.1.1.54 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Septin | 0.51 | 43.0 | 2.78e-01 | 98.2% | 65.1% |
D2
medium
residues 64-115