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MH193369.1__AWD92297.1__X__00010
Bact-VirMH193369.1__AWD92297.1__X__00010
Identity
- Accession:
- MH193369 ↗
- Kingdom:
- phage
Quality
75.6
mean pLDDT
Taxonomy
TaxID: 2172042
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-38
Domain cluster:
representative
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ek0A00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.68 | 54.0 | 4.28e-01 | 97.4% | 92.2% |
| 3vwoA02 | 2.10.70.40 | Mainly Beta › Ribbon › Complement Module; domain 1 › peptidoglycan hydrolase | 0.66 | 47.0 | 4.48e-01 | 97.4% | 62.7% |
| 2ougA00 | 3.30.70.940 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › NusG, N-terminal domain | 0.62 | 49.0 | 3.47e-01 | 100.0% | 81.6% |
| 1cx8A01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.62 | 49.0 | 2.97e-01 | 100.0% | 39.4% |
| 6p4wB01 | 3.40.91.30 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.59 | 41.0 | 3.13e-01 | 78.9% | 27.5% |
| 1j2vA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 45.0 | 3.59e-01 | 100.0% | 75.2% |
| 4i6mD00 | 6.20.420.10 | Special › Other non-globular › Factor Xa Inhibitor › | 0.58 | 39.0 | 3.66e-01 | 73.7% | 52.8% |
| 7o4xA01 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 45.0 | 3.54e-01 | 100.0% | 79.8% |
| 2wzpR02 | 3.55.50.50 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › Phage tail base-plate attachment protein, domain D4 | 0.55 | 43.0 | 3.32e-01 | 94.7% | 80.8% |
| 5u1xA02 | 2.60.490.10 | Mainly Beta › Sandwich › atp-gated p2x4 ion channel fold › atp-gated p2x4 ion channel domain | 0.54 | 40.0 | 2.44e-01 | 84.2% | 80.7% |
| 1t7pA02 | 1.20.1060.10 | Mainly Alpha › Up-down Bundle › Taq DNA Polymerase; Chain T, domain 4 › Taq DNA Polymerase; Chain T, domain 4 | 0.54 | 37.0 | 2.55e-01 | 100.0% | 17.8% |
| 3owcB00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 39.0 | 2.80e-01 | 97.4% | 45.3% |
| 3i3lA02 | 3.30.390.160 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.54 | 37.0 | 2.70e-01 | 76.3% | 68.0% |
| 3k8aB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 37.0 | 2.85e-01 | 73.7% | 60.2% |
| 4rx6D00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 41.0 | 3.20e-01 | 100.0% | 76.6% |
| 4mybA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.53 | 36.0 | 2.33e-01 | 71.1% | 14.7% |
| 4hhvA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 38.0 | 2.90e-01 | 76.3% | 91.3% |
| 4f0aB02 | 3.30.2460.20 | Alpha Beta › 2-Layer Sandwich › Endo-n-acetylneuraminidase fold › Wnt (Wingless and Int-1), C-terminal domain | 0.52 | 39.0 | 3.47e-01 | 94.7% | 95.6% |
| 3ga8A00 | 3.10.20.860 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.52 | 38.0 | 3.36e-01 | 86.8% | 52.2% |
| 3cgbA03 | 3.30.390.30 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain | 0.52 | 41.0 | 3.12e-01 | 100.0% | 42.7% |
| 2i7xA02 | 3.40.50.10890 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 41.0 | 2.73e-01 | 97.4% | 86.7% |
| 1kk1A02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.52 | 35.0 | 2.68e-01 | 76.3% | 45.9% |
| 3ksrA01 | 6.20.370.100 | Special › Other non-globular › Rhinovirus 14, subunit 4 › | 0.52 | 35.0 | 3.45e-01 | 71.1% | 100.0% |
| 5b55A01 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 38.0 | 2.66e-01 | 100.0% | 57.9% |
| 6tmfI00 | 1.10.455.10 | Mainly Alpha › Orthogonal Bundle › Ribosomal Protein S7 › Ribosomal protein S7/S5 | 0.51 | 37.0 | 2.43e-01 | 78.9% | 58.9% |
| 5vogA00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 37.0 | 2.46e-01 | 71.1% | 14.8% |
| 5uh0A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.50 | 35.0 | 2.60e-01 | 86.8% | 33.6% |
| 2b5uA03 | 3.10.380.10 | Alpha Beta › Roll › Ribonuclease domain of colicin e3 (Residues 456-551) › Colicin E3-like ribonuclease domain | 0.50 | 35.0 | 2.87e-01 | 86.8% | 33.7% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3591159 | 376.1.3.11 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › zf-HC5HC2H_2 | 0.67 | 52.0 | 3.60e-01 | 97.4% | 27.1% |
| 5061441 | 327.3.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › GMP synthetase C-terminal dimerisation domain › GMP synthetase C-terminal dimerisation domain › GMP_synt_C | 0.65 | 51.0 | 3.42e-01 | 97.4% | 34.1% |
| 3507051 | 327.3.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › GMP synthetase C-terminal dimerisation domain › GMP synthetase C-terminal dimerisation domain › GMP_synt_C | 0.64 | 51.0 | 3.80e-01 | 97.4% | 86.1% |
| 3997327 | 3315.1.1.0 ↗ | a+b complex topology › Insertion domain in O-GlcNAc transferase › Insertion domain in O-GlcNAc transferase › Insertion domain in O-GlcNAc transferase | 0.62 | 49.0 | 3.83e-01 | 97.4% | 65.3% |
| 3947646 | 304.17.1.1 ↗ | a+b two layers › Alpha-beta plaits › N-utilization substance G protein NusG, N-terminal domain › N-utilization substance G protein NusG, N-terminal domain › NusG | 0.62 | 51.0 | 3.78e-01 | 97.4% | 40.9% |
| 3674718 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.61 | 48.0 | 2.84e-01 | 97.4% | 15.1% |
| 3169451 | 109.4.1.3193 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HAT, Suf, HAT_Syf1_CNRKL1_C, HAT_Syf1_CNRKL1_N, HAT_PRP39_N | 0.59 | 45.0 | 2.54e-01 | 100.0% | 8.6% |
| 3413287 | 11.1.1.796 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_Shg | 0.58 | 46.0 | 3.16e-01 | 94.7% | 92.3% |
| 3317524 | 225.1.1.0 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0.58 | 42.0 | 2.70e-01 | 76.3% | 12.4% |
| 3677669 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.58 | 43.0 | 2.57e-01 | 97.4% | 15.1% |
| None | — | 0.56 | 42.0 | 3.19e-01 | 97.4% | 72.0% | |
| 3725152 | 376.1.3.11 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › zf-HC5HC2H_2 | 0.56 | 43.0 | 3.23e-01 | 100.0% | 40.0% |
| 3355968 | 375.1.1.190 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Fra10Ac1 | 0.56 | 42.0 | 3.26e-01 | 100.0% | 60.0% |
| 4972140 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.56 | 43.0 | 3.08e-01 | 100.0% | 47.3% |
| 5052927 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 39.0 | 2.78e-01 | 78.9% | 20.7% |
| 3592295 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.54 | 37.0 | 2.57e-01 | 73.7% | 30.0% |
| 3741228 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.53 | 40.0 | 2.25e-01 | 78.9% | 48.4% |
| 3601374 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.53 | 37.0 | 2.07e-01 | 76.3% | 13.5% |
| 3365774 | 109.4.1.1560 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_3, E_motif | 0.53 | 38.0 | 2.23e-01 | 78.9% | 15.8% |
| 3480623 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.52 | 38.0 | 3.22e-01 | 89.5% | 45.6% |
| 3691484 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.52 | 38.0 | 2.41e-01 | 76.3% | 11.7% |
| 4025162 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.52 | 37.0 | 2.99e-01 | 86.8% | 57.9% |
| 3899494 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.52 | 40.0 | 2.89e-01 | 97.4% | 39.2% |
| 3287591 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.52 | 36.0 | 2.01e-01 | 78.9% | 5.6% |
| 4996277 | 2003.1.2.17 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Amino_oxidase | 0.52 | 40.0 | 2.43e-01 | 100.0% | 85.7% |
| 4179803 | 4964.1.1.2 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › RNA_pol | 0.51 | 36.0 | 2.44e-01 | 86.8% | 30.0% |
| 4985875 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.51 | 42.0 | 3.96e-01 | 100.0% | 92.0% |
| 3494833 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.51 | 36.0 | 2.08e-01 | 81.6% | 7.3% |
| 5007619 | 3010.1.1.2 ↗ | a/b three-layered sandwiches › C-terminal subdomain in Lon-related proteases catalytic domains › C-terminal subdomain in Lon-related proteases catalytic domains › C-terminal subdomain in Lon-related proteases catalytic domains › Lon_C | 0.50 | 36.0 | 2.81e-01 | 89.5% | 50.0% |