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MH221128.1__AWN08874.1__STsAS_111__00079

Bact-Vir

MH221128.1__AWN08874.1__STsAS_111__00079

Identity

Accession:
MH221128 ↗
Kingdom:
phage

Quality

84.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-73
PDB
Domain cluster: representative
D2 medium residues 74-132
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3do9C02 4.10.810.10 Few Secondary Structures › Irregular › Virus Scaffolding Protein; Chain A › Virus Scaffolding Protein; Chain A 0.80 45.0 5.23e-01 78.0% 77.3%
2xkoC02 6.10.250.870 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.66 41.0 4.95e-01 76.3% 100.0%
2vkjA00 1.20.58.2030 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.63 45.0 3.79e-01 91.5% 42.5%
4eqyA02 1.20.1180.10 Mainly Alpha › Up-down Bundle › Udp N-acetylglucosamine O-acyltransferase; Domain 2 › Udp N-acetylglucosamine O-acyltransferase, C-terminal domain 0.62 49.0 4.73e-01 89.8% 82.9%
3rk6A00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.59 47.0 3.31e-01 94.9% 34.6%
3tndA00 3.40.50.1010 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease 0.55 40.0 3.13e-01 79.7% 40.9%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3394202 109.4.1.338 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RIC1 0.64 49.0 4.18e-01 86.4% 55.2%
3813221 109.4.1.420 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.63 49.0 3.74e-01 86.4% 47.9%
3719996 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.62 49.0 4.25e-01 94.9% 66.7%
3491111 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.61 52.0 4.31e-01 93.2% 95.0%
3684956 101.1.1.256 alpha arrays › HTH › HTH › Three-helical HTH › Clr5 0.60 40.0 3.95e-01 81.4% 63.1%
3424605 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.56 47.0 3.74e-01 100.0% 59.3%
3622213 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.54 42.0 3.49e-01 88.1% 66.4%