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MH229863.1__AWY07348.1__SEA_JACKIEB_29__00029

Bact-Vir

MH229863.1__AWY07348.1__SEA_JACKIEB_29__00029

Identity

Accession:
MH229863 ↗
Kingdom:
phage

Quality

81.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Streptomyces_phage_JackieB

TaxID: 2201347

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 133-183
PDB
Domain cluster: representative
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3hshE00 3.40.1620.70 Alpha Beta › 3-Layer(aba) Sandwich › YefM-like fold › 0.70 53.0 5.22e-01 94.1% 80.0%
3vpbE00 2.20.28.160 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.69 46.0 4.50e-01 78.4% 62.5%
1yu0A01 2.10.10.30 Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › 0.67 51.0 5.12e-01 92.2% 82.4%
3n3fA01 3.40.1620.70 Alpha Beta › 3-Layer(aba) Sandwich › YefM-like fold › 0.67 50.0 5.24e-01 94.1% 100.0%
2crhA01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.66 53.0 4.33e-01 92.2% 49.0%
2izvA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.66 53.0 3.79e-01 92.2% 30.7%
1h9oA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.66 55.0 4.46e-01 100.0% 52.8%
2ci9B00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.65 52.0 4.25e-01 92.2% 50.0%
2cs0A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.65 52.0 4.30e-01 92.2% 50.5%
1bbuA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 47.0 3.51e-01 82.4% 69.3%
2c9wA01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.63 50.0 3.99e-01 92.2% 44.2%
1x31C01 3.30.1360.120 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 0.63 43.0 3.51e-01 78.4% 36.2%
1clwA00 2.160.20.20 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.62 52.0 3.02e-01 100.0% 12.9%
1v6zA01 2.40.240.20 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 0.61 51.0 4.75e-01 96.1% 89.2%
8d3mI01 3.90.320.10 Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › 0.61 45.0 3.08e-01 82.4% 44.0%
2r47A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.58 48.0 3.69e-01 100.0% 39.9%
3k2tA01 3.30.505.50 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain 0.58 43.0 4.40e-01 84.3% 95.7%
1z01A02 2.20.25.680 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.57 38.0 3.72e-01 78.4% 60.7%
2otnB01 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.56 43.0 3.15e-01 86.3% 44.5%
3ihpA01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.56 45.0 3.66e-01 100.0% 63.8%
2bbuA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.56 43.0 3.20e-01 92.2% 32.1%
6gfaA02 3.30.30.30 Alpha Beta › 2-Layer Sandwich › Defensin A-like › 0.56 35.0 3.45e-01 98.0% 57.1%
2lojA01 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.55 38.0 4.02e-01 90.2% 97.4%
2kknA00 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.55 38.0 2.81e-01 76.5% 43.9%
2kksA00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.54 44.0 3.36e-01 100.0% 47.9%
3d2fA02 3.30.30.30 Alpha Beta › 2-Layer Sandwich › Defensin A-like › 0.54 34.0 3.06e-01 98.0% 42.1%
1wquA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.53 44.0 3.56e-01 100.0% 49.1%
2f5tX02 2.30.30.690 Mainly Beta › Roll › SH3 type barrels. › 0.53 40.0 3.51e-01 90.2% 70.0%
3o0wA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 43.0 2.90e-01 100.0% 57.3%
3hjhA02 3.30.2060.10 Alpha Beta › 2-Layer Sandwich › Penicillin-binding protein 1b fold › Penicillin-binding protein 1b domain 0.52 37.0 3.29e-01 96.1% 47.7%
6l4lA02 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.52 41.0 3.21e-01 98.0% 61.0%
1q5qH00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.52 40.0 2.80e-01 96.1% 85.3%
1fm0E00 3.90.1170.40 Alpha Beta › Alpha-Beta Complex › Aldehyde Oxidoreductase; domain 3 › Molybdopterin biosynthesis MoaE subunit 0.52 41.0 3.15e-01 96.1% 74.6%
4tl8F00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 43.0 2.97e-01 100.0% 66.7%
2a6pA00 3.40.50.1240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like 0.51 37.0 2.78e-01 96.1% 71.0%
1efpB00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.51 42.0 2.76e-01 96.1% 50.0%
3fhlA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.50 38.0 2.76e-01 92.2% 88.6%
ECOD (58)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3405960 3761.1.1.2 ↗ beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Collagen_trimer 0.80 60.0 6.37e-01 90.2% 97.7%
3900165 3761.1.1.2 ↗ beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Collagen_trimer 0.78 56.0 5.99e-01 86.3% 93.0%
3498702 3761.1.1.2 ↗ beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Collagen_trimer 0.76 58.0 6.07e-01 84.3% 93.3%
3623217 3761.1.1.2 ↗ beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Collagen_trimer 0.76 60.0 6.12e-01 96.1% 90.0%
3917719 3761.1.1.2 ↗ beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Collagen_trimer 0.74 53.0 5.55e-01 86.3% 88.9%
4955635 375.1.1.63 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › LysW-like_globular 0.73 49.0 4.61e-01 78.4% 56.2%
1505155 3761.1.1.2 ↗ beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Collagen_trimer 0.70 53.0 5.25e-01 94.1% 78.6%
3871990 391.1.2.1 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › VWC 0.69 43.0 4.20e-01 70.6% 58.2%
1281772 3761.1.1.2 ↗ beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Collagen_trimer 0.67 52.0 5.14e-01 94.1% 81.5%
3483784 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.66 53.0 4.29e-01 92.2% 48.6%
3474295 2004.5.1.3 ↗ a/b three-layered sandwiches › P-loop domains-like › Differentially expressed in normal cells and neoplasia (DENN) domain › Differentially expressed in normal cells and neoplasia (DENN) domain › DENN 0.66 56.0 3.64e-01 98.0% 40.4%
3506772 214.1.1.10 ↗ a+b two layers › SH2 › SH2 › SH2 › DUF7145 0.66 54.0 4.02e-01 90.2% 36.8%
5069323 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.66 44.0 4.47e-01 78.4% 72.0%
3935342 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.65 52.0 4.09e-01 92.2% 42.6%
3954395 3097.1.1.0 ↗ a+b two layers › Ribosome-associated factor Y › Ribosome-associated factor Y › Ribosome-associated factor Y 0.65 54.0 5.36e-01 100.0% 90.9%
3933443 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.65 51.0 4.71e-01 92.2% 71.4%
3905730 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.65 52.0 4.02e-01 90.2% 40.0%
3479721 214.1.1.0 ↗ a+b two layers › SH2 › SH2 › SH2 0.64 54.0 4.33e-01 100.0% 49.5%
3875325 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.64 50.0 3.77e-01 92.2% 35.0%
3961965 3097.1.1.1 ↗ a+b two layers › Ribosome-associated factor Y › Ribosome-associated factor Y › Ribosome-associated factor Y › Ribosom_S30AE_C 0.63 50.0 4.76e-01 100.0% 75.4%
4927153 375.1.1.63 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › LysW-like_globular 0.62 43.0 4.20e-01 80.4% 67.3%
4993841 2492.1.1.18 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB 0.62 53.0 4.00e-01 100.0% 50.7%
5049198 2492.1.1.18 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB 0.62 52.0 3.74e-01 100.0% 45.4%
3477642 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.62 52.0 4.07e-01 100.0% 45.0%
3516794 214.1.1.0 ↗ a+b two layers › SH2 › SH2 › SH2 0.62 51.0 3.84e-01 98.0% 39.3%
3506774 214.1.1.10 ↗ a+b two layers › SH2 › SH2 › SH2 › DUF7145 0.62 49.0 3.78e-01 90.2% 39.2%
4991056 375.1.1.63 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › LysW-like_globular 0.61 41.0 4.09e-01 78.4% 65.5%
4554426 3097.1.1.1 ↗ a+b two layers › Ribosome-associated factor Y › Ribosome-associated factor Y › Ribosome-associated factor Y › Ribosom_S30AE_C 0.61 51.0 5.10e-01 100.0% 94.4%
4932491 221.1.2.7 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › RS4NT 0.61 45.0 3.61e-01 82.4% 40.9%
5028514 375.1.1.63 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › LysW-like_globular 0.61 42.0 4.02e-01 78.4% 61.7%
5081359 2492.1.1.2 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB 0.61 51.0 3.64e-01 100.0% 34.7%
3958547 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.60 49.0 4.64e-01 96.1% 90.8%
5068304 2492.1.1.2 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB 0.60 52.0 3.77e-01 100.0% 39.3%
3982481 64.3.1.0 ↗ beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain 0.60 53.0 4.86e-01 98.0% 90.8%
3937472 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.60 45.0 3.79e-01 92.2% 43.8%
4946175 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.60 42.0 3.77e-01 76.5% 94.7%
3518947 214.1.1.10 ↗ a+b two layers › SH2 › SH2 › SH2 › DUF7145 0.60 48.0 3.82e-01 98.0% 40.8%
4960870 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.59 40.0 3.38e-01 70.6% 91.0%
4991801 2492.1.1.18 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB 0.59 50.0 3.84e-01 100.0% 49.6%
4301433 3018.1.1.1 ↗ a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › TilS 0.59 41.0 3.50e-01 78.4% 52.6%
4287653 3018.1.1.1 ↗ a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › TilS 0.58 41.0 3.55e-01 78.4% 55.6%
3890372 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.58 48.0 3.85e-01 98.0% 55.5%
3830898 219.1.1.23 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › MINDY_DUB 0.58 47.0 3.13e-01 98.0% 40.2%
3517650 214.1.1.10 ↗ a+b two layers › SH2 › SH2 › SH2 › DUF7145 0.57 48.0 3.96e-01 100.0% 52.0%
4946362 2492.1.1.0 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like 0.57 46.0 3.26e-01 98.0% 56.3%
5038834 2492.1.1.18 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB 0.56 45.0 3.49e-01 98.0% 74.6%
1011 66.1.1.1 ↗ beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske 0.56 41.0 3.80e-01 80.4% 64.2%
4631930 286.1.1.2 ↗ a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF 0.56 43.0 3.32e-01 90.2% 50.0%
5075880 2004.1.1.16 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf 0.55 37.0 2.71e-01 72.5% 38.8%
3168773 2.1.1.92 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_pol_D_N 0.55 46.0 3.40e-01 98.0% 75.2%
3672067 219.1.1.23 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › MINDY_DUB 0.55 44.0 3.07e-01 100.0% 63.8%
3387446 7579.1.1.60 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › DUF2920 0.55 44.0 2.66e-01 94.1% 85.2%
3679774 219.1.1.23 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › MINDY_DUB 0.55 44.0 2.64e-01 100.0% 26.5%
5038705 281.1.1.0 ↗ a+b three layers › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase 0.53 43.0 2.71e-01 94.1% 35.4%
4052309 7528.1.1.2 ↗ a/b three-layered sandwiches › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › PGM_PMM_II 0.53 40.0 3.32e-01 94.1% 80.9%
4989913 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.52 41.0 2.77e-01 100.0% 25.3%
3310464 375.1.1.69 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zinc_ribbon_12 0.52 36.0 3.67e-01 78.4% 82.0%
4014955 244.1.1.0 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.51 39.0 3.12e-01 94.1% 59.2%
D2 high residues 186-390
PDB
Domain cluster: rep: NC_001902__NP_046981.1__psiM2p27__00027__D58-215
CATH (25)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1fi2A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.66 30.0 3.03e-01 100.0% 41.3%
2wq4A01 2.60.120.760 Mainly Beta › Sandwich › Jelly Rolls › 0.65 40.0 4.97e-01 100.0% 96.9%
1nc7A00 2.60.290.11 Mainly Beta › Sandwich › Hypothetical Protein Tm1070; Chain: A › TM1070-like 0.65 32.0 4.21e-01 96.1% 82.8%
2qqkA01 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.63 34.0 4.33e-01 100.0% 89.7%
4aw7A03 2.60.120.1200 Mainly Beta › Sandwich › Jelly Rolls › 0.62 35.0 4.47e-01 100.0% 92.6%
4i0wD02 2.60.120.1290 Mainly Beta › Sandwich › Jelly Rolls › 0.60 36.0 4.44e-01 99.5% 93.8%
1nziA01 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.58 32.0 4.24e-01 100.0% 96.5%
4msvA01 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.58 38.0 4.64e-01 100.0% 100.0%
4k02A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.57 35.0 4.41e-01 84.9% 100.0%
1wmdA02 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.57 33.0 4.25e-01 100.0% 100.0%
5egjA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.56 35.0 3.83e-01 78.5% 74.9%
2zewB00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.55 38.0 4.42e-01 100.0% 97.3%
2gvhC01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.55 35.0 4.24e-01 90.2% 96.3%
1qu0C00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 40.0 4.19e-01 97.1% 85.2%
3e1eC00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.54 35.0 4.15e-01 88.8% 95.7%
6a48A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.53 36.0 4.29e-01 99.5% 100.0%
2y8kA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.53 37.0 4.34e-01 100.0% 100.0%
2bpa200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.53 39.0 4.19e-01 99.5% 88.6%
4c91A04 2.60.120.1620 Mainly Beta › Sandwich › Jelly Rolls › 0.52 39.0 4.06e-01 100.0% 82.5%
2bi0A02 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.52 35.0 4.09e-01 80.5% 94.6%
2a6vB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 48.0 4.71e-01 100.0% 99.1%
6lebA02 2.60.40.1290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 33.0 3.88e-01 98.5% 92.8%
2g16B00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.51 39.0 4.32e-01 93.7% 98.2%
2pfcA00 3.10.129.30 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Rv0098, thioesterase-like hot dog domain 0.51 39.0 4.37e-01 85.9% 100.0%
1tulA00 2.70.40.20 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Baculovirus telokin-like protein 20 0.51 27.0 3.57e-01 93.7% 99.0%
ECOD (20)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1826895 10.32.1.58 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › BPA_C 0.62 35.0 4.46e-01 100.0% 91.9%
4954605 10.1.2.186 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › DUF3344 0.60 35.0 4.35e-01 100.0% 92.8%
3597078 10.1.1.35 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 0.58 42.0 4.35e-01 97.1% 78.5%
3268650 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.57 38.0 4.57e-01 100.0% 98.6%
3407350 222.1.1.0 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase 0.57 34.0 3.59e-01 78.5% 64.3%
224845 222.1.1.4 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT 0.57 35.0 4.41e-01 84.9% 100.0%
5042255 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.56 36.0 4.30e-01 100.0% 96.3%
3519566 10.32.1.230 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › NDNF_N 0.56 35.0 4.20e-01 100.0% 93.3%
3529054 222.1.1.4 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT 0.55 33.0 3.55e-01 78.0% 66.7%
3796586 222.1.1.0 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase 0.55 33.0 3.48e-01 78.5% 64.3%
6057 222.1.1.4 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT 0.55 35.0 4.26e-01 90.2% 97.0%
4446241 222.1.1.17 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PKS_DH_N 0.55 38.0 4.41e-01 86.8% 98.6%
5012014 222.1.1.4 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT 0.54 35.0 3.82e-01 88.3% 78.2%
3693742 222.1.1.10 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_3 0.52 31.0 3.81e-01 82.4% 91.5%
3494380 269.1.1.3 ↗ a+b complex topology › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › COLFI 0.52 37.0 3.75e-01 100.0% 72.4%
2623859 9.13.1.1 ↗ beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › Dirigent 0.52 29.0 3.12e-01 92.7% 61.5%
3215162 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.52 39.0 4.09e-01 97.1% 86.5%
3431362 331.3.1.17 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt 0.51 27.0 2.86e-01 86.8% 54.1%
4199388 504.1.1.1 ↗ a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › SecB 0.51 34.0 4.03e-01 75.1% 96.6%
3551948 222.1.1.4 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT 0.51 34.0 3.79e-01 99.5% 85.6%
D3 medium residues 1-110
PDB
Domain cluster: rep: MH744420.1__AYD81622.1__SEA_KROMP_21__00021__D3-89
CATH (21)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7z47G01 2.60.40.1080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.66 39.0 4.70e-01 84.5% 92.9%
6ixyA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 54.0 5.02e-01 91.8% 73.5%
1gl4B00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 41.0 4.52e-01 88.2% 82.0%
2fcbA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 39.0 4.36e-01 90.9% 80.2%
3d30A02 2.60.40.760 Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain 0.61 39.0 4.21e-01 82.7% 75.5%
3kptB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 47.0 4.83e-01 87.3% 85.2%
3dhpA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.60 35.0 3.79e-01 72.7% 67.7%
2dlgA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 41.0 4.57e-01 88.2% 96.2%
2d7nA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 40.0 4.60e-01 88.2% 98.7%
2pz4A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 46.0 4.45e-01 82.7% 93.4%
1wosA04 2.40.30.110 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains 0.58 40.0 4.37e-01 81.8% 89.5%
2dv6A02 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.58 43.0 3.15e-01 78.2% 46.3%
4m9pA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 39.0 4.11e-01 83.6% 78.0%
7p0eA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 37.0 3.83e-01 84.5% 75.8%
6z0jA03 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.54 41.0 3.98e-01 79.1% 72.7%
3amlA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 46.0 4.57e-01 93.6% 90.4%
3wi9A00 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.53 43.0 3.18e-01 89.1% 49.2%
1r6vA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 41.0 4.11e-01 83.6% 92.9%
4f7kA02 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.52 43.0 4.04e-01 91.8% 96.4%
6kliA01 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.52 43.0 3.57e-01 91.8% 99.0%
1sddB02 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.51 41.0 3.95e-01 88.2% 100.0%
ECOD (30)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4944289 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.75 51.0 5.84e-01 82.7% 95.0%
3985398 11.1.1.39 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_1 0.73 50.0 5.40e-01 80.0% 82.1%
4944293 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.72 50.0 5.67e-01 82.7% 92.9%
4069797 11.1.1.335 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GlgB_N 0.72 44.0 4.61e-01 79.1% 67.0%
5059960 11.1.4.24 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CarbopepD_reg_2 0.71 46.0 5.17e-01 86.4% 85.9%
5025179 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.71 50.0 4.98e-01 85.5% 70.4%
5031113 11.1.4.23 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CarboxypepD_reg 0.70 45.0 5.15e-01 85.5% 88.7%
5027795 11.1.4.23 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CarboxypepD_reg 0.69 46.0 5.05e-01 86.4% 83.3%
2983569 11.1.4.36 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › SpaA 0.68 49.0 5.22e-01 85.5% 84.5%
5079079 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.67 46.0 4.86e-01 82.7% 81.1%
4987895 11.1.4.23 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CarboxypepD_reg 0.64 43.0 4.77e-01 80.9% 88.2%
4959964 11.1.4.23 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CarboxypepD_reg 0.64 47.0 5.07e-01 82.7% 91.4%
3902508 11.1.1.850 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF28354 0.63 44.0 4.75e-01 100.0% 88.9%
4930828 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.63 51.0 4.89e-01 89.1% 76.8%
2163571 11.1.4.36 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › SpaA 0.62 52.0 4.74e-01 92.7% 68.3%
3889858 1.1.8.20 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › Beta-barrel_CAF17_C 0.61 42.0 4.69e-01 87.3% 96.2%
4000825 11.1.1.12 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Filamin 0.60 44.0 4.55e-01 90.9% 81.0%
3935807 10.32.1.258 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GBD_IRG7_N 0.60 38.0 4.17e-01 80.9% 78.9%
3477864 11.1.1.12 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Filamin 0.60 42.0 4.67e-01 92.7% 95.3%
4438254 11.1.4.27 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › fn3_3 0.59 42.0 4.54e-01 85.5% 90.0%
3244558 11.1.1.12 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Filamin 0.58 42.0 2.99e-01 88.2% 24.4%
3244559 11.1.1.12 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Filamin 0.57 38.0 4.08e-01 88.2% 81.1%
3472375 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 42.0 4.61e-01 88.2% 97.8%
4324042 11.1.4.27 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › fn3_3 0.56 42.0 4.39e-01 83.6% 88.0%
5060622 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.56 43.0 4.47e-01 82.7% 88.6%
3574548 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 38.0 4.11e-01 87.3% 85.6%
4961549 3156.1.1.0 ↗ beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related 0.56 46.0 3.85e-01 90.9% 82.1%
4248195 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.53 38.0 4.06e-01 84.5% 87.4%
3208928 3156.1.1.0 ↗ beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related 0.52 43.0 3.77e-01 90.9% 90.0%
3945597 11.1.1.252 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › bMG1 0.52 38.0 3.82e-01 87.3% 77.3%