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MH238467.1__AWY03284.1__X__00017
Bact-VirMH238467.1__AWY03284.1__X__00017
Identity
- Accession:
- MH238467 ↗
- Kingdom:
- phage
Quality
94.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 35-87
Domain cluster:
representative
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6grrB01 | 3.30.457.10 | Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › Copper amine oxidase-like, N-terminal domain | 0.69 | 60.0 | 5.31e-01 | 100.0% | 89.9% |
| 8ornD01 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.68 | 59.0 | 4.15e-01 | 100.0% | 40.9% |
| 1ujrA01 | 3.30.720.50 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.67 | 51.0 | 4.42e-01 | 83.0% | 57.8% |
| 3lxqA01 | 3.30.1120.80 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.66 | 48.0 | 3.91e-01 | 77.4% | 46.5% |
| 7dd9A02 | 2.70.98.30 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 | 0.66 | 56.0 | 3.60e-01 | 98.1% | 48.6% |
| 7sz2A01 | 3.30.720.50 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.64 | 48.0 | 4.08e-01 | 83.0% | 54.3% |
| 1cqaA00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.63 | 43.0 | 3.36e-01 | 73.6% | 44.7% |
| 6phxA01 | 2.70.98.60 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis | 0.62 | 52.0 | 3.27e-01 | 98.1% | 95.7% |
| 5mu3B00 | 3.40.50.12050 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.60 | 53.0 | 3.77e-01 | 100.0% | 38.0% |
| 1w5rA01 | 3.30.2140.10 | Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › Arylamine N-acetyltransferase | 0.60 | 51.0 | 3.63e-01 | 100.0% | 66.5% |
| 3mi6A01 | 2.70.98.60 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis | 0.60 | 50.0 | 3.17e-01 | 98.1% | 96.4% |
| 7a0kA01 | 2.130.10.30 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II | 0.60 | 47.0 | 3.15e-01 | 96.2% | 50.8% |
| 2yfoA01 | 2.70.98.60 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis | 0.60 | 50.0 | 3.16e-01 | 98.1% | 96.4% |
| 1x4rA01 | 3.30.720.50 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.59 | 44.0 | 3.95e-01 | 83.0% | 57.0% |
| 1k32A02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.59 | 48.0 | 2.91e-01 | 90.6% | 100.0% |
| 2xn1A01 | 2.70.98.60 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis | 0.59 | 48.0 | 3.08e-01 | 98.1% | 96.1% |
| 1xipA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.58 | 48.0 | 3.00e-01 | 100.0% | 41.1% |
| 1erjB00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.57 | 49.0 | 2.95e-01 | 96.2% | 78.7% |
| 1y8qB01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 39.0 | 2.68e-01 | 75.5% | 86.9% |
| 1genA00 | 2.110.10.10 | Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain | 0.56 | 41.0 | 3.02e-01 | 92.5% | 60.5% |
| 3ajvC02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.55 | 43.0 | 3.63e-01 | 86.8% | 72.5% |
| 3dxqA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.55 | 40.0 | 3.53e-01 | 81.1% | 91.6% |
| 1tolA01 | 2.30.27.10 | Mainly Beta › Roll › Phage FD Coat Protein, Membrane penetration domain › Phage FD Coat Protein,Membrane penetration domain | 0.54 | 40.0 | 3.55e-01 | 83.0% | 70.7% |
| 1npeA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.54 | 42.0 | 2.88e-01 | 100.0% | 84.0% |
| 1r21A00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.53 | 42.0 | 3.63e-01 | 98.1% | 76.0% |
| 6qp9B01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 45.0 | 2.63e-01 | 96.2% | 91.8% |
| 1f49A05 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.52 | 41.0 | 2.74e-01 | 98.1% | 61.7% |
| 1fy2A00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.51 | 39.0 | 2.74e-01 | 94.3% | 99.1% |
| 3rlfF02 | 3.10.650.10 | Alpha Beta › Roll › MalF N-terminal region-like › MalF N-terminal region-like | 0.50 | 42.0 | 3.73e-01 | 98.1% | 68.3% |
ECOD (57)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3337215 | 4357.1.1.6 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE_5 | 0.73 | 56.0 | 4.78e-01 | 83.0% | 55.3% |
| 3502859 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.73 | 51.0 | 3.21e-01 | 75.5% | 31.0% |
| 3858984 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.72 | 51.0 | 3.44e-01 | 75.5% | 21.0% |
| 4580534 | 241.3.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › N domain of copper amine oxidase › N domain of copper amine oxidase › Cu_amine_oxidN1 | 0.72 | 61.0 | 4.87e-01 | 98.1% | 62.7% |
| 4421368 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.71 | 51.0 | 3.48e-01 | 75.5% | 22.2% |
| 3763426 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.71 | 50.0 | 3.39e-01 | 75.5% | 21.0% |
| 3874262 | 4357.1.1.1 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE | 0.71 | 54.0 | 4.22e-01 | 83.0% | 50.9% |
| 4033196 | 304.4.1.4 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM | 0.70 | 48.0 | 3.51e-01 | 71.7% | 64.3% |
| 3846048 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.70 | 51.0 | 3.38e-01 | 77.4% | 20.5% |
| 4517026 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.70 | 50.0 | 3.32e-01 | 75.5% | 20.0% |
| 3935242 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.70 | 56.0 | 3.26e-01 | 86.8% | 68.7% |
| 3623326 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.70 | 48.0 | 2.95e-01 | 71.7% | 34.5% |
| 3169646 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.70 | 60.0 | 5.05e-01 | 100.0% | 81.7% |
| 3617714 | 4357.1.1.1 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE | 0.70 | 54.0 | 4.77e-01 | 83.0% | 62.7% |
| 135088 | 241.3.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › N domain of copper amine oxidase › N domain of copper amine oxidase › Cu_amine_oxidN1 | 0.70 | 60.0 | 5.17e-01 | 100.0% | 82.6% |
| 3210934 | 77.3.1.7 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › PF31062 | 0.70 | 51.0 | 4.12e-01 | 79.2% | 40.0% |
| 3260247 | 4357.1.1.1 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE | 0.69 | 53.0 | 4.58e-01 | 83.0% | 62.7% |
| 4979775 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.69 | 59.0 | 3.83e-01 | 100.0% | 38.5% |
| 3248668 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.69 | 55.0 | 4.83e-01 | 88.7% | 76.2% |
| 3633634 | 5.1.4.80 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Utp8_b_propeller | 0.69 | 51.0 | 2.96e-01 | 79.2% | 29.2% |
| 3510942 | 4357.1.1.1 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE | 0.69 | 52.0 | 4.65e-01 | 83.0% | 64.0% |
| 3911194 | 4357.1.1.1 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE | 0.68 | 52.0 | 4.55e-01 | 83.0% | 60.0% |
| 3914736 | 4357.1.1.1 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE | 0.68 | 52.0 | 4.90e-01 | 83.0% | 70.8% |
| 4114928 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.68 | 52.0 | 3.58e-01 | 84.9% | 30.8% |
| 3996720 | 4357.1.1.1 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE | 0.68 | 52.0 | 4.76e-01 | 83.0% | 64.3% |
| 3590950 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.68 | 48.0 | 3.49e-01 | 77.4% | 33.5% |
| 907 | 4357.1.1.1 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE | 0.67 | 51.0 | 4.04e-01 | 83.0% | 43.6% |
| 3313714 | 4.2.1.0 ↗ | beta barrels › SH3 › SAND › SAND | 0.67 | 51.0 | 4.59e-01 | 86.8% | 60.0% |
| 4239781 | 3006.1.1.6 ↗ | a+b two layers › Sm-Like archaeal protein Smap3, C-terminal domain › Sm-Like archaeal protein Smap3, C-terminal domain › Sm-Like archaeal protein Smap3, C-terminal domain › CPSF73-100_C | 0.67 | 53.0 | 4.82e-01 | 86.8% | 70.0% |
| 5082094 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.67 | 57.0 | 3.66e-01 | 100.0% | 44.8% |
| None | — | 0.66 | 58.0 | 3.47e-01 | 100.0% | 95.0% | |
| 4890232 | 5.1.4.34 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup88 | 0.66 | 55.0 | 3.06e-01 | 92.5% | 46.4% |
| 3589929 | 298.1.1.8 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C | 0.65 | 47.0 | 3.49e-01 | 79.2% | 88.7% |
| 3796666 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.65 | 54.0 | 3.24e-01 | 92.5% | 77.6% |
| 3254634 | 4357.1.1.1 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE | 0.65 | 49.0 | 4.43e-01 | 83.0% | 64.0% |
| 3867655 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.65 | 54.0 | 3.61e-01 | 96.2% | 38.7% |
| 3490378 | 331.4.1.9 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › CPSF73-100_C | 0.65 | 50.0 | 4.38e-01 | 84.9% | 72.5% |
| 3617898 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.64 | 54.0 | 3.99e-01 | 98.1% | 42.8% |
| 3532301 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.63 | 54.0 | 3.66e-01 | 98.1% | 41.0% |
| 3581513 | 4357.1.1.1 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE | 0.63 | 47.0 | 4.21e-01 | 83.0% | 57.5% |
| 4946049 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.63 | 49.0 | 4.36e-01 | 86.8% | 87.5% |
| 3662612 | 304.48.1.37 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_2 | 0.62 | 49.0 | 3.12e-01 | 92.5% | 17.7% |
| 3758265 | 4357.1.1.1 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE | 0.61 | 52.0 | 4.31e-01 | 98.1% | 60.0% |
| 3800967 | 4357.1.1.0 ↗ | beta barrels › WWE domain › WWE domain › WWE domain | 0.61 | 46.0 | 4.25e-01 | 83.0% | 65.7% |
| 3470449 | 4357.1.1.0 ↗ | beta barrels › WWE domain › WWE domain › WWE domain | 0.61 | 53.0 | 4.65e-01 | 100.0% | 76.2% |
| 3243117 | 4357.1.1.1 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE | 0.60 | 52.0 | 4.27e-01 | 100.0% | 65.0% |
| 3754138 | 5.1.4.302 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_EML | 0.60 | 49.0 | 2.90e-01 | 88.7% | 85.9% |
| 3236407 | 4357.1.1.1 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE | 0.60 | 51.0 | 4.29e-01 | 100.0% | 70.5% |
| 4621250 | 12.3.1.25 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_36N | 0.59 | 50.0 | 3.18e-01 | 100.0% | 94.0% |
| 3533928 | 5.1.4.171 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › HELP+Beta-prop_EML | 0.59 | 50.0 | 3.04e-01 | 96.2% | 87.5% |
| 5019170 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.58 | 49.0 | 3.82e-01 | 94.3% | 44.3% |
| 3231261 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.58 | 48.0 | 3.14e-01 | 96.2% | 20.8% |
| None | — | 0.58 | 45.0 | 2.97e-01 | 92.5% | 18.1% | |
| 3263889 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.57 | 46.0 | 2.67e-01 | 88.7% | 90.2% |
| 5016434 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.57 | 41.0 | 3.75e-01 | 79.2% | 73.3% |
| 3415421 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.56 | 49.0 | 2.95e-01 | 98.1% | 80.0% |
| 4631877 | 5.1.4.219 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DPPIV_N | 0.56 | 44.0 | 2.62e-01 | 100.0% | 44.7% |