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MH248138.1__AWY08536.1__Alexandra_279__00277

Bact-Vir

MH248138.1__AWY08536.1__Alexandra_279__00277

Identity

Accession:
MH248138 ↗
Kingdom:
phage

Quality

75.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Alexandravirus› Erwinia_phage_vB_EamM_Alexandra

TaxID: 2201424

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-80
PDB
Domain cluster: representative
CATH (81)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ytlA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.86 56.0 6.46e-01 81.2% 92.0%
3goxA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.83 57.0 6.55e-01 81.2% 96.1%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.83 61.0 6.38e-01 85.5% 85.5%
2e70A00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.82 54.0 5.43e-01 82.6% 66.2%
3lx7A01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.82 51.0 6.12e-01 84.1% 95.7%
2heqA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.82 61.0 6.85e-01 81.2% 100.0%
2ckkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.82 59.0 6.63e-01 82.6% 98.1%
1igqB00 2.30.30.150 Mainly Beta › Roll › SH3 type barrels. › KorB, C-terminal domain 0.81 56.0 6.13e-01 89.9% 87.7%
1m1gB03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.81 56.0 5.89e-01 81.2% 79.4%
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.80 54.0 6.13e-01 84.1% 94.1%
2d9tA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.80 55.0 6.36e-01 81.2% 100.0%
2ckkA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.80 59.0 6.42e-01 82.6% 93.0%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.79 54.0 5.89e-01 82.6% 87.5%
2jngA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.79 59.0 5.69e-01 87.0% 71.4%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.79 52.0 6.08e-01 76.8% 100.0%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.78 56.0 6.15e-01 87.0% 91.2%
2e6zA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.77 52.0 5.58e-01 81.2% 81.4%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 53.0 5.42e-01 84.1% 74.2%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.76 60.0 5.72e-01 84.1% 73.4%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.76 50.0 5.62e-01 82.6% 90.4%
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 52.0 5.30e-01 84.1% 73.5%
1x6gA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.75 58.0 5.50e-01 82.6% 72.8%
1mhnA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 52.0 5.55e-01 82.6% 84.7%
1k1zA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 57.0 5.52e-01 84.1% 84.6%
4fssB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 57.0 6.03e-01 84.1% 98.4%
1vq8Q00 2.30.30.70 Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 0.73 57.0 5.05e-01 82.6% 62.1%
1jegA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 57.0 6.06e-01 84.1% 96.7%
2e5kA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 56.0 5.78e-01 82.6% 96.9%
2v1qA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 55.0 5.86e-01 81.2% 96.7%
1yn8A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 56.0 5.95e-01 82.6% 98.3%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 57.0 6.05e-01 84.1% 98.3%
2k5fA01 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.72 56.0 5.28e-01 84.1% 79.5%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 55.0 5.62e-01 82.6% 89.6%
5ygbA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 54.0 5.15e-01 82.6% 68.8%
2dl5A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 55.0 5.35e-01 84.1% 74.4%
2ct4A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 56.0 5.57e-01 84.1% 84.3%
6ghmC02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 54.0 5.57e-01 81.2% 90.6%
2eczA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 55.0 5.54e-01 84.1% 82.9%
3pmiA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 49.0 5.09e-01 81.2% 76.9%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 51.0 5.04e-01 91.3% 71.2%
2fpeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 55.0 5.81e-01 84.1% 95.2%
6vlfA03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 54.0 5.75e-01 81.2% 98.3%
1x6bA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 56.0 5.76e-01 85.5% 92.2%
2creA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 55.0 5.46e-01 84.1% 84.5%
3i35A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 53.0 5.70e-01 81.2% 100.0%
4epcA02 2.30.30.170 Mainly Beta › Roll › SH3 type barrels. › 0.70 52.0 5.23e-01 79.7% 93.0%
4fw1A02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.70 47.0 5.16e-01 82.6% 88.9%
4iupA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 55.0 5.44e-01 84.1% 83.3%
2k4yA00 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.69 54.0 5.04e-01 85.5% 79.1%
1khcA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 51.0 5.32e-01 81.2% 83.1%
2k5iA01 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.69 53.0 5.01e-01 84.1% 79.8%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.69 52.0 5.36e-01 85.5% 84.6%
2egeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 53.0 5.22e-01 84.1% 86.7%
2eqmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 49.0 5.37e-01 81.2% 98.1%
1awoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 51.0 5.53e-01 82.6% 98.2%
5f3yA05 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 57.0 5.50e-01 91.3% 87.0%
4a4kA02 2.30.30.1160 Mainly Beta › Roll › SH3 type barrels. › 0.68 60.0 4.78e-01 97.1% 78.9%
2i0nA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 51.0 5.50e-01 84.1% 100.0%
6o5cA02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.67 51.0 4.97e-01 82.6% 85.5%
7u32F02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.67 47.0 5.31e-01 81.2% 100.0%
1zuuA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 49.0 5.24e-01 78.3% 100.0%
6e55A01 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.66 54.0 5.37e-01 91.3% 100.0%
2diqA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 52.0 4.61e-01 100.0% 62.0%
2daqA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 54.0 4.56e-01 91.3% 81.8%
1n27A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 54.0 4.81e-01 92.8% 83.3%
3zuaA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.62 48.0 3.87e-01 89.9% 43.5%
3hrsA02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.62 48.0 4.74e-01 87.0% 86.8%
3b79A00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.61 45.0 3.76e-01 94.2% 44.0%
2vouB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.60 45.0 3.13e-01 81.2% 54.2%
1h3zA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 54.0 4.61e-01 100.0% 89.8%
1awjA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 43.0 4.25e-01 82.6% 74.0%
4zn0A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 43.0 3.35e-01 81.2% 59.4%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.58 41.0 4.16e-01 88.4% 80.6%
2cduA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 43.0 3.40e-01 81.2% 81.5%
3cgbA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 43.0 3.33e-01 82.6% 54.8%
3awiA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 41.0 2.87e-01 81.2% 56.4%
2b3yA05 3.20.19.10 Alpha Beta › Alpha-Beta Barrel › Aconitase; domain 4 › Aconitase, domain 4 0.56 39.0 2.78e-01 73.9% 86.8%
3d3rA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 38.0 3.59e-01 84.1% 59.0%
3h8lA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 39.0 2.92e-01 79.7% 58.0%
2cztA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 43.0 3.44e-01 95.7% 94.8%
2rloA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.50 40.0 3.39e-01 92.8% 96.9%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5004050 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.85 55.0 5.50e-01 82.6% 65.7%
3885050 4.1.1.360 ↗ beta barrels › SH3 › SH3 › SH3 › KOW, G-patch_2 0.83 60.0 4.36e-01 81.2% 29.7%
3274582 4.1.1.365 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_KIN17_C 0.82 56.0 6.23e-01 82.6% 89.1%
3866505 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.82 56.0 6.22e-01 82.6% 89.1%
3237859 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.81 56.0 6.14e-01 82.6% 89.1%
4942163 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.81 57.0 5.92e-01 87.0% 78.5%
4101502 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.80 54.0 6.03e-01 81.2% 88.9%
3795301 4.1.1.319 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_Hsr9 0.80 54.0 5.12e-01 82.6% 60.0%
3555930 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.79 59.0 5.94e-01 91.3% 77.1%
3415020 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.79 59.0 5.61e-01 91.3% 67.5%
3866038 4.1.1.154 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4772 0.79 51.0 4.78e-01 79.7% 54.1%
3820065 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 54.0 5.94e-01 82.6% 89.1%
4075769 4.1.1.154 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4772 0.79 51.0 5.67e-01 79.7% 83.6%
3486495 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 58.0 4.25e-01 91.3% 30.9%
4524466 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.79 55.0 5.48e-01 82.6% 71.4%
4470603 4.1.1.217 ↗ beta barrels › SH3 › SH3 › SH3 › zf-CCCH_4 0.78 54.0 4.05e-01 84.1% 30.3%
3222146 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.78 58.0 6.04e-01 91.3% 83.1%
3756428 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.78 58.0 5.09e-01 91.3% 54.0%
3850775 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.78 54.0 5.54e-01 84.1% 75.4%
3580609 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.78 58.0 6.06e-01 91.3% 84.4%
3476179 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 58.0 5.17e-01 91.3% 56.8%
3938261 4.1.1.360 ↗ beta barrels › SH3 › SH3 › SH3 › KOW, G-patch_2 0.78 58.0 4.42e-01 91.3% 36.0%
3619215 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 58.0 5.06e-01 91.3% 54.0%
4547820 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 58.0 4.96e-01 91.3% 51.4%
3525406 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.78 54.0 4.58e-01 82.6% 45.5%
3579591 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.78 54.0 5.97e-01 82.6% 90.9%
4420173 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.77 54.0 5.24e-01 82.6% 66.7%
4105328 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.77 54.0 5.53e-01 82.6% 76.9%
4002679 4.1.1.322 ↗ beta barrels › SH3 › SH3 › SH3 › GPKOW_C 0.77 62.0 5.06e-01 85.5% 60.0%
3910433 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 53.0 5.52e-01 82.6% 76.9%
3922679 4.1.1.154 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4772 0.77 49.0 5.60e-01 78.3% 90.0%
3519126 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 57.0 5.39e-01 91.3% 67.5%
3317030 4.1.1.366 ↗ beta barrels › SH3 › SH3 › SH3 › PF26738 0.76 53.0 5.64e-01 81.2% 83.3%
3199259 4.1.1.286 ↗ beta barrels › SH3 › SH3 › SH3 › DUF7072 0.76 50.0 5.19e-01 81.2% 72.3%
4400641 4.1.1.397 ↗ beta barrels › SH3 › SH3 › SH3 › PF29622 0.75 58.0 5.49e-01 81.2% 90.0%
3275615 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.75 57.0 4.56e-01 82.6% 42.6%
3672445 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 52.0 4.05e-01 81.2% 34.5%
3190835 4.1.1.286 ↗ beta barrels › SH3 › SH3 › SH3 › DUF7072 0.75 50.0 4.70e-01 81.2% 56.5%
3323530 4.1.1.118 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_15 0.75 60.0 6.19e-01 91.3% 92.3%
3477037 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.74 58.0 5.85e-01 84.1% 91.4%
3627869 4.1.1.347 ↗ beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5, KOW6_SPT5 0.74 65.0 4.94e-01 95.7% 68.4%
3765126 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.74 55.0 6.05e-01 79.7% 100.0%
3267329 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 55.0 4.48e-01 82.6% 44.0%
3406803 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.73 56.0 5.60e-01 81.2% 80.0%
3398298 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.73 53.0 5.07e-01 76.8% 68.8%
3712451 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 55.0 4.46e-01 84.1% 44.0%
3584364 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 48.0 5.49e-01 81.2% 94.0%
5001589 4.1.1.14 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e 0.73 61.0 5.31e-01 89.9% 63.0%
3174058 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.73 57.0 5.54e-01 84.1% 80.0%
3414912 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.72 56.0 4.84e-01 97.1% 54.3%
3714156 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 55.0 5.07e-01 84.1% 64.7%
4104915 4.1.1.245 ↗ beta barrels › SH3 › SH3 › SH3 › SspH 0.72 50.0 5.34e-01 82.6% 83.3%
3481726 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 55.0 5.78e-01 81.2% 98.3%
3898170 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.72 56.0 5.51e-01 84.1% 93.3%
4001172 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.72 56.0 5.64e-01 84.1% 85.7%
4614716 4.1.1.292 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_Rv2311 0.72 53.0 5.28e-01 78.3% 97.1%
3484618 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.72 56.0 5.48e-01 84.1% 80.0%
3551576 4.1.1.226 ↗ beta barrels › SH3 › SH3 › SH3 › KDM3B_Tudor 0.72 54.0 5.25e-01 84.1% 73.3%
3482868 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.72 53.0 5.87e-01 79.7% 100.0%
513 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.71 55.0 5.54e-01 82.6% 94.2%
3505437 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.71 59.0 5.48e-01 89.9% 76.5%
3617355 4.1.1.348 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor, SMN_YG-box 0.71 55.0 4.91e-01 95.7% 60.0%
3879172 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.71 57.0 5.85e-01 87.0% 95.4%
3393347 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.71 56.0 5.08e-01 97.1% 64.4%
3763497 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.70 55.0 5.38e-01 84.1% 88.0%
4024240 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 55.0 5.21e-01 84.1% 71.2%
4018667 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.70 63.0 5.32e-01 100.0% 60.0%
3504417 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.70 54.0 4.94e-01 97.1% 63.3%
3622052 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.69 56.0 5.17e-01 97.1% 69.4%
3898672 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 51.0 5.29e-01 79.7% 84.6%
3997949 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.69 54.0 4.92e-01 97.1% 64.4%
3840677 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.68 54.0 4.72e-01 97.1% 58.0%
3405627 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 53.0 4.74e-01 87.0% 60.0%
3479037 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 57.0 5.43e-01 91.3% 81.2%
3398464 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 48.0 5.29e-01 75.4% 94.5%
3738126 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.68 56.0 5.08e-01 100.0% 67.8%
3482646 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 57.0 4.04e-01 91.3% 32.5%
3795223 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 49.0 4.57e-01 95.7% 61.2%
3389175 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.68 54.0 4.93e-01 100.0% 65.6%
3923813 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 52.0 5.37e-01 81.2% 87.7%
3469800 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.68 56.0 5.31e-01 89.9% 80.0%
3195050 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.67 55.0 4.93e-01 97.1% 64.2%
3917568 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.67 54.0 4.54e-01 100.0% 52.2%
3924213 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.67 53.0 4.77e-01 100.0% 62.1%
3409299 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.67 52.0 5.01e-01 97.1% 72.5%
3749194 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.67 50.0 5.14e-01 79.7% 85.9%
4026282 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.67 53.0 4.83e-01 97.1% 65.6%
3437523 4.1.1.303 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus 0.66 52.0 5.24e-01 95.7% 85.7%
3672735 4.1.1.303 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus 0.66 50.0 5.18e-01 87.0% 87.7%
2725406 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.66 58.0 5.54e-01 100.0% 89.0%
3787586 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.65 55.0 4.77e-01 100.0% 61.0%
3628870 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.65 53.0 4.54e-01 100.0% 55.5%
3609629 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.65 54.0 4.89e-01 97.1% 66.3%
3790897 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 56.0 4.95e-01 97.1% 66.0%
3429053 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.64 56.0 4.11e-01 95.7% 44.8%
3407855 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.63 51.0 4.70e-01 100.0% 67.8%
3575199 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 55.0 4.80e-01 100.0% 69.5%
3626691 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.61 53.0 4.72e-01 97.1% 70.0%
3363751 4.1.1.246 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_Coilin 0.59 47.0 4.17e-01 89.9% 84.8%
3315510 4.1.1.246 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_Coilin 0.58 47.0 4.06e-01 89.9% 80.9%
D2 medium residues 99-179_385-410
PDB
Domain cluster: rep: Filtrate_w_scaffold_1_prodigal-single.1__X__X__00368__D1-108_249-276
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF04055.28 best Radical_SAM 36.2 9.90e-09 92.5% 42.2%
PF13353.12 Fer4_12 38.1 2.60e-09 82.2% 52.5%
CATH (61)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4m7tA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.77 70.0 5.31e-01 100.0% 76.0%
3vthA04 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.70 51.0 3.81e-01 75.7% 90.4%
2fqxA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.65 47.0 3.93e-01 75.7% 71.4%
2zejB02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 42.0 4.31e-01 75.7% 70.3%
2hc9A01 3.40.50.10590 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Zn-dependent exopeptidases 0.63 45.0 4.06e-01 75.7% 84.4%
3ot4A00 3.40.50.850 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Isochorismatase-like 0.63 46.0 3.72e-01 75.7% 72.7%
5jicA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.63 45.0 3.79e-01 75.7% 86.8%
2e2oA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.61 45.0 3.84e-01 75.7% 97.0%
4rr9A01 3.50.80.10 Alpha Beta › 3-Layer(bba) Sandwich › D-tyrosyl-trna(Tyr) Deacylase; Chain: A; › D-tyrosyl-tRNA(Tyr) deacylase 0.60 50.0 4.63e-01 89.7% 73.9%
2e7yB00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.59 41.0 3.05e-01 71.0% 94.1%
2i71A01 3.40.50.10640 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SSO1389-like 0.59 42.0 3.39e-01 75.7% 70.0%
4htlA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.59 42.0 3.51e-01 75.7% 76.8%
2gupA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.58 42.0 3.48e-01 75.7% 77.5%
1woqA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.58 42.0 3.82e-01 75.7% 69.5%
3htvA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.57 41.0 3.58e-01 75.7% 73.2%
3r8eA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.57 41.0 3.62e-01 75.7% 94.4%
3fleA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.57 41.0 3.19e-01 75.7% 49.0%
4ijaA03 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.57 41.0 3.71e-01 75.7% 95.3%
2hoeA03 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.57 41.0 3.74e-01 75.7% 93.8%
5f1yA02 3.50.30.60 Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › LD-carboxypeptidase A C-terminal domain-like 0.57 43.0 3.65e-01 83.2% 48.3%
4kp1A01 3.30.499.10 Alpha Beta › 2-Layer Sandwich › Aconitase; domain 3 › Aconitase, domain 3 0.57 48.0 3.52e-01 90.7% 42.1%
7caqA01 3.40.1180.10 Alpha Beta › 3-Layer(aba) Sandwich › Undecaprenyl pyrophosphate synthetase › Decaprenyl diphosphate synthase-like 0.56 50.0 4.10e-01 99.1% 98.5%
3i45A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.56 41.0 3.34e-01 75.7% 48.0%
2ychA03 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.56 41.0 3.95e-01 75.7% 94.2%
1z05A03 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.56 41.0 3.51e-01 75.7% 94.1%
2ddmB00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.56 43.0 3.24e-01 82.2% 79.7%
6qv4A04 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 41.0 3.32e-01 75.7% 93.9%
2bo4A01 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.56 50.0 4.15e-01 100.0% 91.1%
3k4oA00 3.40.1160.10 Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like 0.56 49.0 3.75e-01 99.1% 97.7%
3mfqA02 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.56 40.0 3.70e-01 75.7% 59.3%
4y7uA00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.55 49.0 3.92e-01 100.0% 90.2%
1a3cA00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.55 41.0 3.54e-01 78.5% 78.9%
1up7A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 50.0 4.61e-01 100.0% 97.8%
1u8xX01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 49.0 4.24e-01 99.1% 97.6%
4maaA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 40.0 3.24e-01 75.7% 44.8%
2xciA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.55 50.0 4.13e-01 100.0% 70.1%
4uulA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 50.0 4.42e-01 100.0% 97.4%
5kxhA02 3.40.50.11350 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 49.0 4.30e-01 100.0% 84.6%
4bg8A01 3.30.420.430 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.54 43.0 4.08e-01 85.0% 79.8%
2vdwG00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 45.0 3.29e-01 88.8% 99.3%
6bygA03 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.54 49.0 3.39e-01 100.0% 89.0%
2i7tA01 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.54 38.0 2.89e-01 72.0% 90.7%
2x6qA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.53 48.0 3.95e-01 100.0% 65.5%
2jjmA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.53 49.0 4.09e-01 100.0% 65.9%
4x7rA03 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.52 47.0 4.07e-01 100.0% 71.0%
4qysA02 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.52 39.0 4.01e-01 100.0% 81.7%
4jbeA02 3.40.309.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 2 › Aldehyde Dehydrogenase; Chain A, domain 2 0.52 46.0 4.27e-01 100.0% 92.1%
4pqgA03 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.52 47.0 4.00e-01 100.0% 68.4%
5enzA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.52 46.0 4.07e-01 100.0% 72.7%
5i45A00 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.52 46.0 3.82e-01 100.0% 65.1%
6ks6E03 3.50.7.10 Alpha Beta › 3-Layer(bba) Sandwich › GroEL › GroEL 0.52 44.0 3.86e-01 93.5% 61.9%
4u63A01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.52 44.0 3.72e-01 91.6% 79.9%
5hvmA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.52 45.0 3.71e-01 100.0% 68.3%
1x7dA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 47.0 3.99e-01 100.0% 94.7%
4bfcA00 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.51 46.0 3.78e-01 100.0% 76.7%
4ep4A00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.51 44.0 3.84e-01 95.3% 88.6%
3okpA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.51 46.0 3.79e-01 100.0% 66.1%
2xadA00 3.40.50.10320 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › LmbE-like 0.50 45.0 3.42e-01 100.0% 96.5%
4nzpA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.50 46.0 4.24e-01 100.0% 82.6%
4wesB04 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.50 41.0 4.28e-01 97.2% 96.9%
1ybfA00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.50 41.0 3.16e-01 87.9% 78.8%
ECOD (71)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5077514 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.83 59.0 4.64e-01 75.7% 37.6%
5022715 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.80 75.0 5.36e-01 100.0% 81.1%
4979879 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.79 58.0 4.15e-01 75.7% 29.1%
5046504 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.79 73.0 5.05e-01 100.0% 76.7%
5050328 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.79 73.0 5.13e-01 100.0% 70.6%
4141320 2495.1.1.2 ↗ a/b three-layered sandwiches › Cell-division inhibitor MinC, N-terminal domain › Cell-division inhibitor MinC, N-terminal domain › Cell-division inhibitor MinC, N-terminal domain › MinC_N_1 0.77 47.0 5.39e-01 75.7% 82.5%
3603477 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.76 70.0 5.08e-01 100.0% 88.9%
4958130 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.76 70.0 4.82e-01 100.0% 76.5%
4970981 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.76 55.0 4.26e-01 75.7% 36.1%
2870555 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.73 66.0 4.66e-01 100.0% 82.0%
3928906 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.71 42.0 2.74e-01 75.7% 15.1%
4361143 2495.1.1.2 ↗ a/b three-layered sandwiches › Cell-division inhibitor MinC, N-terminal domain › Cell-division inhibitor MinC, N-terminal domain › Cell-division inhibitor MinC, N-terminal domain › MinC_N_1 0.70 44.0 5.07e-01 75.7% 86.3%
4991264 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.70 63.0 4.46e-01 100.0% 88.3%
4935176 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.67 61.0 4.24e-01 100.0% 85.8%
4380807 2484.6.1.1 ↗ mixed a+b and a/b › Ribonuclease H-like › Periplasmic domain of ExbD/TolR › Periplasmic domain of ExbD/TolR › ExbD 0.67 43.0 4.92e-01 75.7% 87.5%
4930546 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.67 61.0 4.29e-01 100.0% 88.6%
3788500 7514.1.1.3 ↗ a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_6 0.62 45.0 3.96e-01 75.7% 93.1%
3450147 247.1.1.24 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B+Lactamase_B_2 0.62 43.0 3.15e-01 71.0% 91.8%
4116094 2484.1.1.37 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase 0.61 44.0 4.30e-01 75.7% 68.7%
3785529 7514.1.1.3 ↗ a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_6 0.61 44.0 3.95e-01 75.7% 91.9%
3830852 247.1.1.11 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 0.61 42.0 3.05e-01 71.0% 85.7%
3988071 2484.1.1.8 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › ROK 0.59 42.0 3.69e-01 75.7% 86.7%
3597856 7512.1.1.46 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_11 0.59 54.0 4.36e-01 100.0% 80.8%
3417283 7516.1.1.16 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_43 0.58 53.0 3.86e-01 100.0% 93.4%
3510874 7512.1.1.0 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.58 52.0 4.81e-01 99.1% 100.0%
3829695 7512.1.1.55 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Mito_fiss_Elm1 0.58 52.0 4.27e-01 100.0% 64.8%
4346963 7542.1.2.1 ↗ a/b three-layered sandwiches › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain II › Aconitase 0.58 50.0 4.43e-01 94.4% 95.5%
3336608 7512.1.1.0 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.58 41.0 3.71e-01 90.7% 53.3%
4934838 7542.1.2.1 ↗ a/b three-layered sandwiches › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain II › Aconitase 0.57 48.0 4.77e-01 89.7% 98.2%
1175743 2484.1.1.8 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › ROK 0.57 41.0 3.40e-01 75.7% 72.6%
4937064 2484.1.1.8 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › ROK 0.57 41.0 2.98e-01 75.7% 51.5%
3369678 7542.1.2.1 ↗ a/b three-layered sandwiches › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain II › Aconitase 0.56 47.0 4.73e-01 90.7% 95.5%
4947107 7542.1.2.1 ↗ a/b three-layered sandwiches › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain II › Aconitase 0.56 47.0 4.74e-01 90.7% 98.2%
4981211 7542.1.2.1 ↗ a/b three-layered sandwiches › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain II › Aconitase 0.56 47.0 4.46e-01 89.7% 86.4%
3937418 7512.1.1.27 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › O-FucT 0.56 50.0 4.17e-01 99.1% 72.4%
3683253 247.1.1.0 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase 0.56 38.0 2.83e-01 71.0% 95.0%
4008091 2003.1.1.26 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Glyco_hydro_4 0.55 50.0 4.08e-01 100.0% 82.0%
4974796 7516.1.1.2 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.55 50.0 3.77e-01 100.0% 79.6%
3199623 7516.1.1.0 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases 0.55 50.0 3.66e-01 100.0% 86.7%
5029130 7512.1.1.3 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.54 49.0 4.11e-01 100.0% 68.3%
4945861 2007.24.1.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › AtpF-like › AtpF-like 0.54 36.0 3.97e-01 75.7% 90.0%
4182694 7512.1.1.3 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.54 49.0 4.06e-01 100.0% 66.5%
5030480 7512.1.1.8 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Epimerase_2 0.54 49.0 4.17e-01 100.0% 68.2%
4963465 7512.1.1.3 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.53 49.0 3.91e-01 100.0% 59.5%
3385771 7512.1.1.8 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Epimerase_2 0.53 48.0 4.14e-01 100.0% 68.2%
4998980 7512.1.1.3 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.53 48.0 3.95e-01 100.0% 61.5%
3964969 7512.1.1.3 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.53 48.0 4.04e-01 100.0% 66.7%
4996455 7512.1.1.3 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.53 48.0 3.90e-01 100.0% 61.0%
4669966 2003.1.1.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.53 48.0 4.19e-01 100.0% 99.4%
5014965 7512.1.1.3 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.53 48.0 3.90e-01 100.0% 62.1%
4990045 7512.1.1.3 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.53 48.0 4.04e-01 100.0% 69.1%
3286462 2484.1.1.8 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › ROK 0.53 38.0 3.12e-01 75.7% 73.5%
4510839 7512.1.1.3 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.53 47.0 4.07e-01 100.0% 70.6%
4862899 7512.1.1.3 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.52 45.0 4.53e-01 99.1% 94.3%
4974507 7512.1.1.3 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.52 47.0 4.03e-01 100.0% 68.0%
4325933 7512.1.1.3 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.52 47.0 3.88e-01 100.0% 62.1%
4946683 7512.1.1.32 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_trans_1_4 0.52 47.0 3.91e-01 100.0% 74.1%
5056524 7512.1.1.3 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.52 47.0 3.85e-01 100.0% 61.5%
1779601 7512.1.1.3 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.52 46.0 3.82e-01 100.0% 65.1%
5045760 7512.1.1.3 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.52 47.0 3.75e-01 100.0% 56.7%
5003388 7512.1.1.3 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.52 47.0 3.98e-01 100.0% 76.0%
4949605 7512.1.1.3 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.52 46.0 3.93e-01 100.0% 66.1%
3941314 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.52 37.0 3.62e-01 75.7% 80.8%
5038933 7512.1.1.3 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.52 47.0 4.00e-01 100.0% 73.5%
5020610 7512.1.1.3 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.52 46.0 3.82e-01 100.0% 62.6%
4019688 7512.1.1.3 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.51 46.0 3.63e-01 100.0% 53.8%
None — 0.51 46.0 4.23e-01 100.0% 99.3%
3996031 2484.1.1.39 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Fumble 0.51 44.0 3.36e-01 95.3% 74.8%
3224123 7512.1.1.32 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_trans_1_4 0.51 45.0 3.84e-01 100.0% 67.8%
10199 2011.2.1.1 ↗ a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PNP_UDP_1 0.50 41.0 3.16e-01 87.9% 78.8%
None — 0.50 46.0 3.88e-01 100.0% 80.0%
D3 medium residues 180-291_370-384
PDB
Domain cluster: representative
CATH (52)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7pd2B01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.70 64.0 4.62e-01 100.0% 52.4%
2yx0A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.68 60.0 4.45e-01 96.9% 43.2%
2hisA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.68 62.0 4.61e-01 100.0% 72.8%
3t7vA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.68 62.0 4.51e-01 100.0% 52.8%
3emzA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.67 61.0 4.49e-01 100.0% 71.3%
7dz9A01 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.64 58.0 4.57e-01 100.0% 71.3%
3kp1A01 3.20.20.440 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › D-Lysine 5,6-aminomutase alpha subunit 0.63 57.0 4.01e-01 100.0% 39.7%
1e5nA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.63 57.0 4.18e-01 100.0% 60.7%
1vhnA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.63 58.0 4.69e-01 100.0% 67.5%
2qezE03 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.63 57.0 4.35e-01 100.0% 56.0%
2wmfA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.62 57.0 4.16e-01 100.0% 53.4%
3eb2A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.62 56.0 4.33e-01 100.0% 56.6%
3paoB00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.62 56.0 4.21e-01 100.0% 68.2%
3dcpA00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.62 56.0 4.35e-01 100.0% 86.6%
4mozD00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.62 55.0 4.18e-01 100.0% 54.0%
2uvaG04 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.61 56.0 4.27e-01 100.0% 57.4%
5fi9A01 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.60 54.0 3.80e-01 100.0% 98.0%
2x0kA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.59 40.0 3.54e-01 100.0% 46.8%
4cz2B00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 52.0 4.67e-01 96.1% 86.6%
2clsA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 52.0 4.70e-01 97.6% 91.1%
2efjA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 47.0 3.92e-01 91.3% 50.5%
2pbfA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 39.0 3.32e-01 92.9% 39.9%
2hnhA01 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.58 51.0 3.96e-01 95.3% 72.2%
2hpiA01 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.58 50.0 3.90e-01 94.5% 72.4%
3oesA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 51.0 4.76e-01 96.9% 89.2%
2exxA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 52.0 4.44e-01 100.0% 93.6%
5dn8A02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 50.0 4.64e-01 96.1% 90.2%
1vr6A02 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.57 52.0 4.06e-01 100.0% 51.1%
3do6A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 51.0 3.87e-01 100.0% 66.8%
4twbA01 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.57 50.0 4.77e-01 98.4% 96.1%
2uz0A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.56 50.0 4.06e-01 100.0% 86.2%
4gm6A00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.56 51.0 3.80e-01 100.0% 99.1%
3e9nA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 50.0 4.43e-01 100.0% 98.9%
7e6iA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 48.0 4.39e-01 96.1% 100.0%
2dcnA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.56 50.0 3.79e-01 100.0% 98.1%
3tlqA00 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.55 50.0 4.07e-01 100.0% 62.3%
3ewmA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.54 49.0 3.70e-01 100.0% 91.1%
1ni4A00 3.40.50.970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.54 48.0 3.51e-01 100.0% 59.1%
6oibA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 46.0 4.37e-01 96.9% 79.5%
1aoxA00 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.53 47.0 4.06e-01 97.6% 89.6%
3vbcA00 3.40.50.11530 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 38.0 3.79e-01 75.6% 89.7%
2jjmA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.52 47.0 4.19e-01 100.0% 91.1%
1i1nA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 41.0 3.40e-01 91.3% 47.3%
3c3jA01 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.52 47.0 4.09e-01 100.0% 73.2%
3mcaA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 46.0 4.31e-01 97.6% 95.5%
6nffA02 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.52 45.0 3.46e-01 100.0% 85.3%
2f48A01 3.40.50.450 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.52 44.0 3.41e-01 92.9% 68.1%
7uuim01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 44.0 4.10e-01 92.9% 81.0%
3fniA00 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.51 45.0 4.29e-01 97.6% 83.8%
5hvmA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.51 42.0 3.59e-01 89.0% 78.4%
3mggB01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.51 44.0 4.07e-01 94.5% 81.7%
4fx5A02 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.51 45.0 4.01e-01 98.4% 91.8%
ECOD (61)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4164523 2002.1.1.121 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,Mob_synth_C 0.76 71.0 5.20e-01 100.0% 69.8%
5049746 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.76 69.0 5.44e-01 96.9% 58.8%
4954936 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.76 58.0 5.68e-01 98.4% 73.9%
4975940 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.75 67.0 5.93e-01 96.1% 81.7%
4326866 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.75 70.0 5.29e-01 100.0% 52.1%
4945643 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.73 66.0 4.94e-01 96.9% 47.6%
5051867 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.73 62.0 4.76e-01 90.6% 61.1%
4980030 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.72 65.0 5.12e-01 96.1% 58.8%
3589076 2002.1.1.126 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,Radical_SAM_C 0.72 67.0 4.95e-01 100.0% 52.9%
4107914 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.72 64.0 5.04e-01 95.3% 61.2%
4029214 2002.1.1.126 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,Radical_SAM_C 0.72 67.0 4.78e-01 100.0% 47.4%
4944822 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.72 64.0 5.23e-01 96.1% 58.3%
5026715 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.72 66.0 5.26e-01 100.0% 58.2%
4975306 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.72 65.0 5.16e-01 96.9% 57.6%
3497112 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.72 66.0 4.78e-01 100.0% 47.2%
3188934 2002.1.1.126 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,Radical_SAM_C 0.72 66.0 4.84e-01 100.0% 47.4%
3955139 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.72 66.0 4.89e-01 99.2% 62.6%
4995751 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.71 66.0 4.85e-01 100.0% 62.5%
5066534 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.71 64.0 5.03e-01 96.1% 52.4%
4327780 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.71 55.0 4.22e-01 88.2% 36.5%
4943552 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.70 63.0 4.88e-01 97.6% 50.9%
5057177 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.70 62.0 5.02e-01 96.1% 63.4%
5016066 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.70 65.0 4.82e-01 100.0% 63.9%
5071022 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.70 64.0 5.07e-01 99.2% 57.6%
5077587 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.70 63.0 4.95e-01 98.4% 57.7%
5023378 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.69 62.0 4.96e-01 98.4% 60.4%
5018580 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.69 61.0 4.78e-01 96.1% 70.9%
5036843 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.69 63.0 5.04e-01 100.0% 64.9%
4133617 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.67 57.0 4.23e-01 92.1% 42.8%
4668782 2002.1.1.151 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_53 0.67 61.0 4.26e-01 100.0% 46.3%
4454884 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.67 57.0 4.61e-01 92.9% 55.1%
5014092 2002.1.1.74 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Meth_synt_2 0.66 60.0 4.50e-01 100.0% 66.3%
4987728 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.66 59.0 4.70e-01 98.4% 51.4%
5034424 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.65 55.0 4.38e-01 90.6% 65.6%
5051584 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.65 56.0 4.56e-01 93.7% 65.8%
4033655 2002.1.1.25 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HMGL-like 0.65 59.0 4.56e-01 100.0% 73.9%
5074581 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.65 59.0 4.53e-01 99.2% 56.8%
5042766 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.64 60.0 4.65e-01 100.0% 68.5%
3260634 129.1.1.0 ↗ alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like 0.63 56.0 4.72e-01 96.9% 89.5%
3666624 2006.1.1.35 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Pex22_HAD-like 0.62 46.0 5.10e-01 84.3% 98.0%
3250562 2004.1.1.164 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Roc 0.62 55.0 4.77e-01 96.9% 88.7%
4952497 2002.1.1.66 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHquinase_I 0.62 53.0 4.40e-01 100.0% 52.7%
4673181 2004.1.1.73 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 0.61 54.0 4.74e-01 96.9% 86.5%
4638898 2002.1.1.66 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHquinase_I 0.60 52.0 4.36e-01 100.0% 54.6%
4997008 2002.1.1.9 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › OMPdecase 0.60 54.0 4.41e-01 100.0% 66.1%
1295874 2003.1.1.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.60 44.0 4.02e-01 74.8% 84.0%
4098501 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.60 55.0 4.39e-01 100.0% 53.5%
3975681 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.58 53.0 4.09e-01 100.0% 59.6%
4653607 2003.1.1.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.57 51.0 4.41e-01 96.9% 75.9%
3398484 2003.1.1.8 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › G6PD_N 0.57 50.0 4.37e-01 97.6% 90.8%
3412061 2007.1.3.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.56 49.0 4.51e-01 96.9% 81.8%
4971796 2007.2.1.3 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › FMN_red 0.56 49.0 4.32e-01 97.6% 91.8%
4611706 2003.1.1.8 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › G6PD_N 0.56 50.0 4.40e-01 99.2% 89.5%
3993359 2003.1.5.5 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › UPF0020 0.55 42.0 3.82e-01 95.3% 61.2%
5031395 2007.3.1.6 ↗ a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Ligase_CoA_2 0.55 48.0 4.32e-01 94.5% 90.0%
3724920 7514.1.1.3 ↗ a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_6 0.53 44.0 3.88e-01 90.6% 70.5%
3777467 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.53 47.0 2.71e-01 100.0% 14.0%
None — 0.52 42.0 3.54e-01 94.5% 51.9%
4927157 300.1.1.0 ↗ a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.52 43.0 4.06e-01 89.8% 93.5%
None — 0.52 44.0 3.62e-01 96.1% 67.1%
3475210 2004.1.1.29 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.51 41.0 3.83e-01 88.2% 95.8%
D4 medium residues 292-369
PDB
Domain cluster: representative
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ep6B01 3.30.360.50 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › S-adenosylmethionine decarboxylase 0.62 34.0 4.28e-01 100.0% 100.0%
3ihpA03 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.61 42.0 2.78e-01 71.8% 27.8%
3k1hA00 3.30.1120.180 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Flagellar FLiS export co-chaperone, HP1076 0.56 46.0 4.07e-01 89.7% 90.4%
4nphA02 1.20.1270.330 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.55 38.0 3.92e-01 100.0% 75.7%
6ghfB02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.54 48.0 4.10e-01 98.7% 85.5%
3ufbA01 1.20.1260.30 Mainly Alpha › Up-down Bundle › Ferritin › N6 adenine-specific DNA methyltransferase, N-terminal domain 0.54 45.0 3.56e-01 92.3% 83.6%
1eejA02 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.52 40.0 3.37e-01 89.7% 47.5%
6aqgA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 37.0 3.05e-01 75.6% 75.2%
2yhaA02 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.51 35.0 2.56e-01 70.5% 52.8%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3219664 364.1.1.1 ↗ few secondary structure elements › TAZ domain › TAZ domain › TAZ domain › zf-TAZ 0.57 47.0 4.21e-01 89.7% 80.0%
3223029 364.1.1.1 ↗ few secondary structure elements › TAZ domain › TAZ domain › TAZ domain › zf-TAZ 0.57 47.0 4.32e-01 89.7% 77.0%
3686816 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.56 47.0 3.20e-01 89.7% 85.3%
3688301 2004.1.1.292 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AFG1_ATPase 0.56 34.0 2.72e-01 78.2% 31.0%
3264850 103.1.1.0 ↗ alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.55 37.0 3.95e-01 84.6% 78.6%
3269220 4106.1.1.1 ↗ few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC 0.53 41.0 2.89e-01 94.9% 27.2%
3935332 192.2.1.1 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.53 46.0 3.87e-01 94.9% 82.3%
2756576 206.1.3.21 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RimK 0.53 41.0 2.99e-01 84.6% 39.2%
3577884 210.1.3.1 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_2 0.51 38.0 2.78e-01 83.3% 86.3%
4972033 2003.1.5.66 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.50 41.0 2.75e-01 87.2% 46.1%