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MH248947.1__AWY07566.1__SEA_YOSIF_2__00002
Bact-VirMH248947.1__AWY07566.1__SEA_YOSIF_2__00002
Identity
- Accession:
- MH248947 ↗
- Kingdom:
- phage
Quality
66.9
mean pLDDT
Taxonomy
TaxID: 2201421
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-60
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3tufA00 | 1.10.287.4300 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Stage III sporulation protein AH-like | 0.81 | 55.0 | 4.32e-01 | 70.7% | 37.4% |
| 2pvqA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.79 | 53.0 | 4.33e-01 | 70.7% | 40.6% |
| 4nv0A02 | 1.10.150.340 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Pyrimidine 5'-nucleotidase (UMPH-1), N-terminal domain | 0.75 | 60.0 | 5.38e-01 | 89.7% | 69.5% |
| 2vj4A01 | 1.10.10.2060 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.63 | 53.0 | 4.50e-01 | 89.7% | 93.3% |
| 1lfkA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.61 | 51.0 | 3.17e-01 | 100.0% | 30.7% |
| 3fbzA01 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 48.0 | 4.01e-01 | 89.7% | 63.7% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4978274 | 4163.1.1.0 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like | 0.87 | 59.0 | 4.59e-01 | 70.7% | 37.4% |
| 4300897 | 5094.1.1.1 ↗ | a+b duplicates or obligate multimers › OmpH-like › OmpH-like › OmpH-like › OmpH | 0.84 | 58.0 | 4.33e-01 | 70.7% | 43.8% |
| None | — | 0.84 | 58.0 | 3.23e-01 | 72.4% | 6.3% |