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MH271302.1__AWY05239.1__SEA_MARGARET_59__00059
Bact-VirMH271302.1__AWY05239.1__SEA_MARGARET_59__00059
Identity
- Accession:
- MH271302 ↗
- Kingdom:
- phage
Quality
76.7
mean pLDDT
Taxonomy
TaxID: 2201428
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-66
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1igqB00 | 2.30.30.150 | Mainly Beta › Roll › SH3 type barrels. › KorB, C-terminal domain | 0.83 | 58.0 | 5.99e-01 | 100.0% | 77.2% |
| 1i1jB00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.75 | 67.0 | 5.56e-01 | 100.0% | 62.5% |
| 1y71A00 | 2.30.30.430 | Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain | 0.74 | 65.0 | 5.25e-01 | 100.0% | 52.3% |
| 1ug1A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.72 | 63.0 | 5.41e-01 | 100.0% | 63.0% |
| 1vwxT01 | 2.30.30.70 | Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 | 0.72 | 66.0 | 5.52e-01 | 100.0% | 62.9% |
| 3mtsA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.71 | 46.0 | 4.62e-01 | 75.0% | 64.5% |
| 4cc2A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.70 | 60.0 | 5.98e-01 | 100.0% | 92.1% |
| 2vc8A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 60.0 | 5.63e-01 | 100.0% | 79.2% |
| 1ne8A00 | 2.30.30.110 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 59.0 | 4.78e-01 | 100.0% | 73.3% |
| 1x43A01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.65 | 54.0 | 5.40e-01 | 100.0% | 91.9% |
| 5f3yA05 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.65 | 58.0 | 5.37e-01 | 100.0% | 79.2% |
| 3fb9B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 55.0 | 4.94e-01 | 100.0% | 67.9% |
| 1n27A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 50.0 | 4.33e-01 | 100.0% | 56.2% |
| 4f88102 | 3.90.1720.60 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › | 0.62 | 53.0 | 3.66e-01 | 100.0% | 28.6% |
| 1gcbA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.61 | 52.0 | 3.20e-01 | 100.0% | 24.5% |
| 2lmcB00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.61 | 44.0 | 4.42e-01 | 80.0% | 77.0% |
| 1iy9A02 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.59 | 44.0 | 4.67e-01 | 93.3% | 94.2% |
| 2dgkA02 | 3.90.1150.160 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.54 | 36.0 | 3.07e-01 | 70.0% | 73.8% |
| 2au3A02 | 3.90.980.10 | Alpha Beta › Alpha-Beta Complex › DNA primase DNAg catalytic core, N-terminal domain › DNA primase, catalytic core, N-terminal domain | 0.54 | 43.0 | 3.46e-01 | 90.0% | 59.1% |
| 4rcnA04 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.54 | 38.0 | 2.60e-01 | 90.0% | 19.1% |
| 3htrA00 | 2.30.30.240 | Mainly Beta › Roll › SH3 type barrels. › PRC-barrel domain | 0.53 | 47.0 | 4.00e-01 | 100.0% | 61.2% |
| 4ncdA02 | 2.60.40.3970 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 41.0 | 3.74e-01 | 90.0% | 83.0% |
| 6j5cA02 | 3.30.67.10 | Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 | 0.53 | 43.0 | 3.89e-01 | 100.0% | 66.3% |
| 1tu5A02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 42.0 | 3.46e-01 | 95.0% | 70.1% |
| 1twfI02 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.52 | 36.0 | 3.42e-01 | 93.3% | 59.2% |
| 3po3S02 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.51 | 36.0 | 3.47e-01 | 90.0% | 63.5% |
| 2v5yA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 34.0 | 3.01e-01 | 71.7% | 89.2% |
| 3dclA01 | 2.102.30.10 | Mainly Beta › 3-layer Sandwich › tm1086 (SG structure) fold › tm1086 (SG structure) domain | 0.51 | 36.0 | 2.87e-01 | 81.7% | 71.9% |
| 1gd5A00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.50 | 36.0 | 2.96e-01 | 80.0% | 70.0% |
| 1v89A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.50 | 40.0 | 3.36e-01 | 95.0% | 62.7% |
ECOD (54)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5051313 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.83 | 68.0 | 6.60e-01 | 100.0% | 80.0% |
| 3868602 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.77 | 68.0 | 5.77e-01 | 100.0% | 65.0% |
| 3586469 | 4.1.1.287 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5641 | 0.75 | 61.0 | 5.37e-01 | 100.0% | 61.2% |
| 3474075 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 67.0 | 6.27e-01 | 100.0% | 81.1% |
| 3563220 | 4.1.1.220 ↗ | beta barrels › SH3 › SH3 › SH3 › BAHCC1-like_Tudor | 0.74 | 61.0 | 5.49e-01 | 100.0% | 66.3% |
| 3749631 | 4.1.1.14 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e | 0.74 | 52.0 | 4.22e-01 | 91.7% | 41.9% |
| 4003181 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.74 | 65.0 | 6.58e-01 | 100.0% | 98.3% |
| 2410381 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.73 | 66.0 | 6.03e-01 | 100.0% | 78.5% |
| 3937006 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 64.0 | 5.92e-01 | 100.0% | 87.2% |
| 3826751 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.73 | 65.0 | 5.83e-01 | 100.0% | 72.5% |
| 3669492 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.73 | 63.0 | 4.69e-01 | 100.0% | 40.0% |
| 3781440 | 4.1.1.51 ↗ | beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor | 0.72 | 62.0 | 5.62e-01 | 100.0% | 70.0% |
| 3537941 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.72 | 63.0 | 5.58e-01 | 100.0% | 68.2% |
| 3234923 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.72 | 64.0 | 6.30e-01 | 100.0% | 93.7% |
| 3918299 | 4.1.1.376 ↗ | beta barrels › SH3 › SH3 › SH3 › Chromo_MORC2_6th | 0.72 | 59.0 | 5.63e-01 | 100.0% | 77.1% |
| 3427504 | 4.1.1.150 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF3123 | 0.71 | 66.0 | 6.25e-01 | 100.0% | 92.9% |
| 3520216 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.71 | 63.0 | 6.03e-01 | 100.0% | 88.4% |
| 3196131 | 4.1.1.170 ↗ | beta barrels › SH3 › SH3 › SH3 › Rad9_Rad53_bind | 0.71 | 64.0 | 5.47e-01 | 100.0% | 78.9% |
| 3450257 | 4.1.1.150 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF3123 | 0.71 | 65.0 | 5.48e-01 | 100.0% | 66.3% |
| 3706000 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.71 | 62.0 | 5.82e-01 | 100.0% | 88.0% |
| 3484620 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.70 | 62.0 | 5.33e-01 | 100.0% | 77.9% |
| 3911248 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.70 | 62.0 | 5.43e-01 | 100.0% | 90.0% |
| 3174580 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 61.0 | 5.49e-01 | 100.0% | 74.1% |
| 3630782 | 4.1.1.51 ↗ | beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor | 0.70 | 64.0 | 4.72e-01 | 100.0% | 42.1% |
| 3920897 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.70 | 60.0 | 5.60e-01 | 100.0% | 77.3% |
| 4251101 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 62.0 | 5.55e-01 | 100.0% | 70.6% |
| 3550699 | 4.8.1.10 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like | 0.70 | 63.0 | 5.36e-01 | 100.0% | 63.2% |
| 4026274 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 60.0 | 4.48e-01 | 100.0% | 40.7% |
| 3570230 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.69 | 61.0 | 5.34e-01 | 100.0% | 67.8% |
| 4596087 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.68 | 60.0 | 5.59e-01 | 100.0% | 81.3% |
| 3229356 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 62.0 | 5.05e-01 | 100.0% | 63.8% |
| 3517030 | 4.1.1.232 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_Tf2-1 | 0.67 | 61.0 | 5.67e-01 | 100.0% | 84.0% |
| 3788630 | 4.23.1.2 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 | 0.67 | 58.0 | 4.54e-01 | 100.0% | 59.3% |
| 3594811 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 59.0 | 5.76e-01 | 100.0% | 98.5% |
| 3819397 | 4.1.1.219 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM12_LSM | 0.65 | 55.0 | 5.04e-01 | 100.0% | 70.0% |
| 5061113 | 375.1.1.299 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › CPxCG_zf | 0.65 | 50.0 | 5.20e-01 | 96.7% | 90.9% |
| 3253266 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 56.0 | 4.69e-01 | 100.0% | 60.0% |
| 4069560 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 57.0 | 5.26e-01 | 100.0% | 80.0% |
| 3174293 | 101.1.2.284 ↗ | alpha arrays › HTH › HTH › winged helix domain › WAC_Acf1_DNA_bd | 0.63 | 57.0 | 3.96e-01 | 100.0% | 33.2% |
| 2125775 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.61 | 56.0 | 4.60e-01 | 100.0% | 67.3% |
| 4020511 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 51.0 | 3.89e-01 | 100.0% | 40.0% |
| 5072932 | 4.6.1.0 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain | 0.59 | 53.0 | 5.31e-01 | 100.0% | 98.3% |
| 4953339 | 4.6.1.2 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC | 0.59 | 50.0 | 4.58e-01 | 100.0% | 71.2% |
| 3926774 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.56 | 46.0 | 3.61e-01 | 95.0% | 50.7% |
| 3977478 | 4056.1.1.9 ↗ | beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Phage_portal_2 | 0.56 | 48.0 | 4.15e-01 | 100.0% | 84.0% |
| 4220355 | 2003.1.3.29 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO, Pyr_redox_2 | 0.55 | 48.0 | 3.20e-01 | 100.0% | 62.0% |
| 4962071 | 2003.1.3.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO | 0.55 | 48.0 | 2.94e-01 | 100.0% | 51.4% |
| 5058925 | 4.6.1.0 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain | 0.54 | 47.0 | 4.53e-01 | 100.0% | 85.7% |
| 5081143 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.53 | 46.0 | 3.43e-01 | 100.0% | 87.5% |
| 4554479 | 4.6.1.2 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC | 0.52 | 45.0 | 4.12e-01 | 100.0% | 80.0% |
| 3722741 | 2003.1.2.9 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GDI | 0.52 | 43.0 | 2.62e-01 | 96.7% | 63.0% |
| 3685179 | 2003.1.2.9 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GDI | 0.52 | 42.0 | 2.99e-01 | 91.7% | 29.2% |
| 3390197 | 206.1.1.87 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, RIO1 | 0.51 | 36.0 | 2.35e-01 | 75.0% | 30.5% |
| 3726115 | 236.1.1.4 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_zinc_N_2 | 0.50 | 42.0 | 3.30e-01 | 100.0% | 66.2% |