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MH271303.1__AWY05338.1__SEA_MEMENTOMORI_84__00083

Bact-Vir

MH271303.1__AWY05338.1__SEA_MEMENTOMORI_84__00083

Identity

Accession:
MH271303 ↗
Kingdom:
phage

Quality

80.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Hodgkinviridae› Mementomorivirus› Microbacterium_phage_MementoMori

TaxID: 2201436

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-46
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2kmaA02 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.64 52.0 4.43e-01 100.0% 96.4%
1gg3A02 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.63 50.0 4.39e-01 97.8% 97.4%
1wh3A01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.62 49.0 4.42e-01 97.8% 98.6%
4pyrA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.58 46.0 3.24e-01 100.0% 62.9%
2j3tC00 3.30.450.70 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.56 42.0 3.15e-01 88.9% 57.4%
2ra9A02 2.30.270.10 Mainly Beta › Roll › duf1285 protein fold › duf1285 protein 0.55 41.0 3.63e-01 86.7% 64.4%
3zjyC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.50 39.0 3.39e-01 95.6% 54.1%
ECOD (31)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4942725 239.1.1.5 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C 0.66 55.0 4.44e-01 100.0% 78.9%
4537678 239.1.1.6 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C2 0.65 53.0 4.75e-01 100.0% 81.2%
5035867 239.1.1.0 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like 0.62 51.0 4.86e-01 100.0% 96.4%
5071089 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.61 48.0 4.77e-01 95.6% 96.0%
4968500 239.1.1.0 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like 0.61 52.0 4.73e-01 100.0% 82.5%
4936305 375.1.1.332 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › WH_Lhr 0.61 48.0 4.67e-01 100.0% 96.4%
4934433 239.1.1.0 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like 0.60 49.0 4.73e-01 100.0% 96.4%
5056462 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.60 48.0 3.89e-01 91.1% 83.3%
5054972 239.1.1.6 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C2 0.60 48.0 4.21e-01 100.0% 86.1%
5015989 239.1.1.7 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Lhr_WH 0.60 50.0 4.80e-01 100.0% 94.5%
4950806 4.6.1.8 ↗ beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › WH_Lhr 0.60 49.0 4.73e-01 100.0% 92.7%
4956032 239.1.1.7 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Lhr_WH 0.59 48.0 4.50e-01 100.0% 85.0%
3960335 239.1.1.0 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like 0.59 49.0 4.37e-01 100.0% 78.6%
4950422 239.1.1.7 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Lhr_WH 0.58 45.0 4.30e-01 100.0% 90.0%
4964644 239.1.1.0 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like 0.57 45.0 4.38e-01 100.0% 94.5%
4970510 56.2.1.1 ↗ beta sandwiches › Epsilon subunit of F1F0-ATP synthase-N › CO dehydrogenase accessory protein CooT › CO dehydrogenase accessory protein CooT › CooT 0.56 45.0 4.18e-01 100.0% 93.8%
3688256 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.55 42.0 2.67e-01 91.1% 40.4%
4939428 56.2.1.1 ↗ beta sandwiches › Epsilon subunit of F1F0-ATP synthase-N › CO dehydrogenase accessory protein CooT › CO dehydrogenase accessory protein CooT › CooT 0.55 45.0 4.16e-01 97.8% 98.3%
2723206 4312.2.1.1 ↗ a+b two layers › RelE-like › YaeB-like › YaeB-like › TrmO_C 0.54 41.0 3.71e-01 100.0% 88.6%
2596548 56.2.1.1 ↗ beta sandwiches › Epsilon subunit of F1F0-ATP synthase-N › CO dehydrogenase accessory protein CooT › CO dehydrogenase accessory protein CooT › CooT 0.54 42.0 3.88e-01 100.0% 87.1%
4980752 2.1.1.11 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a 0.54 42.0 3.24e-01 100.0% 37.1%
5042620 2.1.1.11 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a 0.54 42.0 3.16e-01 100.0% 35.5%
3421408 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.53 40.0 3.14e-01 100.0% 85.9%
4927618 2.1.1.11 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a 0.53 41.0 3.25e-01 100.0% 41.1%
3578306 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.53 42.0 3.54e-01 97.8% 52.0%
4343591 2.1.1.11 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a 0.53 42.0 3.21e-01 100.0% 38.1%
4935688 2.1.1.11 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a 0.53 40.0 3.17e-01 100.0% 39.0%
4478927 2.1.1.11 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a 0.53 41.0 3.19e-01 100.0% 39.0%
3655352 377.6.1.1 ↗ few secondary structure elements › Glucocorticoid receptor-like › SBT domain › SBT domain › SBP 0.52 38.0 3.62e-01 100.0% 65.0%
3224532 3534.1.1.3 ↗ beta barrels › Pfam PF06938 (DUF1285) › Pfam PF06938 (DUF1285) › Pfam PF06938 (DUF1285) › DUF4505 0.52 36.0 3.15e-01 80.0% 62.7%
None — 0.50 36.0 2.25e-01 88.9% 23.0%