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MH271320.1__AWY06677.1__SEA_ZETA1847_43__00043
Bact-VirMH271320.1__AWY06677.1__SEA_ZETA1847_43__00043
Identity
- Accession:
- MH271320 ↗
- Kingdom:
- phage
Quality
74.4
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Casidaviridae›
Zetavirus›
Microbacterium_phage_Zeta1847
TaxID: 2201444
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 15-96
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3c12A01 | 2.30.30.910 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 43.0 | 5.28e-01 | 100.0% | 96.1% |
| 3cpfA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 45.0 | 4.95e-01 | 100.0% | 89.2% |
| 1iz6A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 47.0 | 5.03e-01 | 100.0% | 89.9% |
| 6s8zA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 45.0 | 5.04e-01 | 100.0% | 98.4% |
| 1uebA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 45.0 | 5.00e-01 | 100.0% | 96.8% |
| 2l89A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 47.0 | 4.24e-01 | 100.0% | 60.2% |
| 1whjA00 | 2.30.30.190 | Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain | 0.54 | 47.0 | 4.35e-01 | 100.0% | 74.5% |
| 2cc3A00 | 3.10.450.230 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein | 0.53 | 40.0 | 3.41e-01 | 89.0% | 47.2% |
| 1ixdA00 | 2.30.30.190 | Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain | 0.53 | 47.0 | 4.35e-01 | 100.0% | 76.9% |
| 2cf5A01 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.52 | 39.0 | 3.04e-01 | 80.5% | 82.1% |
| 2dfvA01 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.52 | 37.0 | 2.85e-01 | 75.6% | 80.6% |
| 4fixA01 | 3.90.550.60 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › | 0.51 | 36.0 | 2.38e-01 | 75.6% | 68.5% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3184389 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 50.0 | 3.83e-01 | 100.0% | 52.0% |
| 3555838 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.53 | 44.0 | 4.32e-01 | 97.6% | 81.1% |
| 4055111 | 4.1.1.7 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 | 0.53 | 48.0 | 4.11e-01 | 97.6% | 67.2% |
| 3340909 | 211.1.1.38 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › FAR1 | 0.53 | 43.0 | 4.09e-01 | 95.1% | 76.8% |
| 4044404 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.52 | 37.0 | 3.39e-01 | 73.2% | 98.1% |
| 5018976 | 295.1.1.53 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DUF3467 | 0.52 | 32.0 | 3.55e-01 | 76.8% | 79.4% |
| 3264469 | 4.1.1.309 ↗ | beta barrels › SH3 › SH3 › SH3 › MRP-S34 | 0.52 | 45.0 | 4.50e-01 | 100.0% | 91.8% |
| 3717221 | 2492.1.1.6 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › A_deamin | 0.51 | 40.0 | 2.68e-01 | 90.2% | 80.1% |
| 3483566 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 43.0 | 3.95e-01 | 92.7% | 71.4% |
D2
medium
residues 106-144
Domain cluster:
representative