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MH271320.1__AWY06697.1__SEA_ZETA1847_63__00063

Bact-Vir

MH271320.1__AWY06697.1__SEA_ZETA1847_63__00063

Identity

Accession:
MH271320 ↗
Kingdom:
phage

Quality

89.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Casidaviridae› Zetavirus› Microbacterium_phage_Zeta1847

TaxID: 2201444

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-59
PDB
Domain cluster: representative
CATH (36)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3goxA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.88 62.0 6.34e-01 100.0% 76.5%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.79 54.0 5.35e-01 100.0% 67.9%
4dq2A03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.78 53.0 5.56e-01 100.0% 78.7%
2ckkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 56.0 5.66e-01 100.0% 77.4%
2diqA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 50.0 4.10e-01 100.0% 38.0%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 62.0 5.47e-01 100.0% 65.3%
1yn8A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 59.0 5.72e-01 100.0% 79.7%
2rqtA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 60.0 5.69e-01 100.0% 78.7%
6c6sD02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.71 51.0 4.93e-01 100.0% 68.3%
1ng2A01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 52.0 5.62e-01 84.9% 95.5%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 60.0 5.64e-01 100.0% 79.7%
2fpeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 57.0 5.42e-01 100.0% 77.4%
4fssB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 58.0 5.55e-01 100.0% 80.3%
1zuyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 57.0 5.58e-01 100.0% 84.5%
1wfwA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 58.0 5.21e-01 100.0% 70.3%
3meuB02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 52.0 4.72e-01 100.0% 62.2%
5z8lA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.66 58.0 4.49e-01 100.0% 52.1%
5o99A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 52.0 5.05e-01 100.0% 76.7%
4ft4B01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.65 57.0 4.16e-01 100.0% 46.0%
1w4sA00 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.65 56.0 4.16e-01 100.0% 43.2%
4wsiA02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 55.0 5.16e-01 100.0% 89.4%
2ke9A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 54.0 4.99e-01 100.0% 77.6%
2xdbA00 3.10.129.130 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › 0.61 50.0 3.70e-01 100.0% 55.6%
2eyzA03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 49.0 4.14e-01 100.0% 53.8%
3pgbA01 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.59 50.0 2.94e-01 100.0% 34.0%
4iupB01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 43.0 4.14e-01 100.0% 72.6%
3ntkB01 2.40.50.790 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 47.0 4.10e-01 94.3% 91.9%
4qmgC01 2.40.50.90 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.57 46.0 3.39e-01 94.3% 78.0%
3ef2A02 3.30.460.70 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › 0.56 39.0 2.98e-01 100.0% 29.0%
2w5nA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.55 49.0 2.94e-01 100.0% 28.2%
3km5A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 39.0 2.78e-01 79.2% 81.0%
2crfA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 40.0 3.17e-01 84.9% 49.6%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.52 39.0 3.71e-01 86.8% 79.7%
4f0qA02 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.52 39.0 2.75e-01 96.2% 23.4%
1jhnA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 39.0 2.65e-01 90.6% 47.0%
4qunA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.50 39.0 2.55e-01 88.7% 29.0%
ECOD (48)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3816553 4.1.1.306 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N 0.81 56.0 5.52e-01 100.0% 69.1%
3535298 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.78 54.0 4.45e-01 100.0% 42.2%
3993882 4.1.1.103 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_12 0.77 55.0 5.64e-01 96.2% 80.0%
3241817 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 54.0 5.17e-01 100.0% 66.7%
4888491 4.1.1.73 ↗ beta barrels › SH3 › SH3 › SH3 › Cul7 0.75 59.0 5.76e-01 100.0% 78.9%
3621642 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.73 60.0 5.17e-01 100.0% 58.7%
3790978 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 60.0 5.48e-01 100.0% 68.6%
3526953 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.72 60.0 5.68e-01 100.0% 77.8%
3936474 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 49.0 4.00e-01 100.0% 40.0%
3891252 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.71 60.0 5.76e-01 100.0% 81.7%
3611425 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 52.0 4.38e-01 84.9% 48.2%
3290564 4.1.1.292 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_Rv2311 0.71 63.0 5.23e-01 100.0% 57.8%
3261396 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.71 53.0 4.44e-01 100.0% 47.8%
4950222 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.70 61.0 4.83e-01 100.0% 65.5%
3503332 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 63.0 5.87e-01 100.0% 86.2%
3441677 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 48.0 5.00e-01 100.0% 78.0%
3815495 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.69 57.0 5.13e-01 100.0% 67.1%
3561094 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.69 60.0 5.37e-01 100.0% 69.3%
3782313 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.69 61.0 5.46e-01 100.0% 70.7%
3879132 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.68 60.0 5.36e-01 100.0% 69.3%
3608890 314.1.1.6 ↗ a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › BPL_LplA_LipB 0.68 47.0 3.04e-01 100.0% 16.2%
3805766 4.1.1.28 ↗ beta barrels › SH3 › SH3 › SH3 › BPL_C 0.68 47.0 4.70e-01 100.0% 70.9%
3831339 314.1.1.0 ↗ a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases 0.68 47.0 2.97e-01 100.0% 14.7%
3607307 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.67 59.0 5.42e-01 100.0% 75.7%
3786978 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.66 58.0 5.35e-01 100.0% 82.6%
3373583 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.66 56.0 5.10e-01 100.0% 70.0%
3594578 4.18.1.0 ↗ beta barrels › SH3 › Plus3 › Plus3 0.66 55.0 4.21e-01 100.0% 40.8%
3323474 4.1.1.158 ↗ beta barrels › SH3 › SH3 › SH3 › DUF3444 0.66 53.0 4.49e-01 100.0% 53.3%
3737805 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.65 59.0 5.20e-01 100.0% 82.7%
3594811 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 57.0 5.37e-01 100.0% 84.6%
5001148 4.6.1.0 ↗ beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain 0.64 45.0 3.92e-01 100.0% 48.8%
4038705 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.64 57.0 5.36e-01 100.0% 83.1%
3203654 601.16.1.12 ↗ alpha bundles › Four-helical up-and-down bundle › FAT domain of focal adhesion kinase › FAT domain of focal adhesion kinase › SH3_1 0.64 56.0 3.77e-01 100.0% 26.5%
3180487 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.64 57.0 3.80e-01 100.0% 27.2%
4340107 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 55.0 4.94e-01 100.0% 81.3%
3930254 2.6.1.1 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase 0.63 51.0 3.71e-01 92.5% 82.6%
4950866 2.1.1.7 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.62 47.0 3.99e-01 83.0% 68.9%
3445055 4.1.1.158 ↗ beta barrels › SH3 › SH3 › SH3 › DUF3444 0.60 52.0 4.24e-01 100.0% 61.9%
4870495 304.169.1.1 ↗ a+b two layers › Alpha-beta plaits › RspWYL1 C-terminal domain › RspWYL1 C-terminal domain › WYL 0.59 46.0 3.76e-01 100.0% 44.4%
3368700 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 50.0 3.97e-01 100.0% 50.0%
4471701 4.1.1.178 ↗ beta barrels › SH3 › SH3 › SH3 › ribosomal_L24 0.57 50.0 3.83e-01 100.0% 53.7%
4558453 4.1.1.346 ↗ beta barrels › SH3 › SH3 › SH3 › FlgH 0.56 46.0 4.10e-01 100.0% 63.3%
3564972 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 39.0 3.66e-01 100.0% 62.9%
4930970 375.1.1.338 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF7479 0.53 36.0 3.60e-01 81.1% 69.1%
3291157 219.1.1.8 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 0.52 39.0 2.97e-01 100.0% 31.4%
1173242 4999.1.1.1 ↗ beta barrels › YopX, C-terminal domain-like › YopX, C-terminal domain-like › YopX, C-terminal domain-like › YopX 0.52 34.0 3.28e-01 100.0% 59.0%
3781523 243.1.1.42 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › MMU163 0.52 38.0 3.01e-01 100.0% 32.9%
3988703 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.51 39.0 3.76e-01 86.8% 72.3%