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MH338236.1__AXC33440.1__SEA_EBONY_82__00081

Bact-Vir

MH338236.1__AXC33440.1__SEA_EBONY_82__00081

Identity

Accession:
MH338236 ↗
Kingdom:
phage

Quality

69.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-57
PDB
Domain cluster: representative
CATH (27)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2d8xA00 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.73 52.0 4.68e-01 76.9% 55.7%
3vd6C01 3.30.50.10 Alpha Beta › 2-Layer Sandwich › Erythroid Transcription Factor GATA-1; Chain A › Erythroid Transcription Factor GATA-1, subunit A 0.71 47.0 5.13e-01 94.2% 87.8%
2ecjA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.71 53.0 5.13e-01 98.1% 72.4%
3ztgA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.67 51.0 4.34e-01 98.1% 48.9%
3nw0A03 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.65 49.0 4.82e-01 98.1% 75.9%
3lrqB00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.65 49.0 4.31e-01 98.1% 55.0%
2darA01 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.65 47.0 4.30e-01 80.8% 81.9%
3mekA02 6.10.140.2220 Special › Helix non-globular › Helix Hairpins › 0.64 44.0 4.58e-01 96.2% 77.6%
2y43A00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.62 46.0 3.98e-01 98.1% 48.9%
2cklA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.62 46.0 3.83e-01 98.1% 43.9%
2cklB01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.62 46.0 4.25e-01 98.1% 62.0%
1wigA00 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.62 49.0 4.44e-01 90.4% 87.7%
2co8A00 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.61 46.0 4.04e-01 84.6% 73.2%
1z6uA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.60 44.0 3.53e-01 98.1% 37.4%
6k2kA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.59 43.0 4.22e-01 98.1% 73.7%
4ccgY00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.58 49.0 4.57e-01 98.1% 85.1%
5d8cA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.57 41.0 3.29e-01 82.7% 56.3%
5d0iB00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.56 40.0 4.09e-01 98.1% 84.3%
5k5iA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.55 38.0 3.82e-01 73.1% 98.1%
1xb4B01 1.10.10.570 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › """Winged helix"" DNA-binding domain. Chain C. Domain 1" 0.53 40.0 3.25e-01 94.2% 41.3%
3hh0A01 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.53 39.0 3.60e-01 82.7% 97.2%
4b3lA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.53 36.0 2.14e-01 73.1% 20.0%
2byeA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.52 36.0 3.00e-01 75.0% 96.0%
1zw8A01 6.10.140.370 Special › Helix non-globular › Helix Hairpins › 0.52 33.0 3.41e-01 82.7% 68.0%
3vusB00 3.20.20.370 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase/deacetylase 0.52 37.0 2.41e-01 76.9% 94.5%
1xjuA00 1.10.530.40 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.51 41.0 3.12e-01 100.0% 71.8%
1usyC00 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.50 40.0 2.63e-01 94.2% 39.4%
ECOD (85)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3243705 377.1.1.4 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › GATA 0.85 58.0 5.91e-01 96.2% 74.0%
3304269 376.1.3.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger 0.82 56.0 6.18e-01 71.2% 92.5%
3728775 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.80 59.0 4.98e-01 78.8% 89.4%
3221207 376.1.6.8 few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › zf-B_box 0.79 54.0 5.70e-01 88.5% 82.2%
3797166 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.77 58.0 4.52e-01 82.7% 82.6%
3364276 904.1.1.0 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain 0.76 55.0 5.59e-01 82.7% 80.0%
4025808 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.72 53.0 5.28e-01 98.1% 76.4%
3223228 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.72 61.0 3.74e-01 100.0% 23.0%
3729830 376.1.1.8 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › U-box 0.70 51.0 4.62e-01 98.1% 56.0%
3601411 376.1.2.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain 0.70 55.0 5.71e-01 98.1% 95.8%
3400742 376.1.1.23 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 0.68 51.0 4.57e-01 98.1% 57.3%
3468275 376.1.3.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger 0.67 60.0 4.76e-01 100.0% 75.7%
3264295 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.66 49.0 4.47e-01 96.2% 60.0%
4934214 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.66 50.0 4.79e-01 96.2% 69.8%
4135426 376.1.1.22 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 0.66 52.0 4.47e-01 98.1% 54.1%
3533740 376.1.1.1 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.66 52.0 4.65e-01 98.1% 61.3%
3217008 376.1.1.23 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 0.66 48.0 4.92e-01 96.2% 84.0%
3629267 376.1.1.20 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.66 55.0 4.69e-01 96.2% 57.6%
3582511 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.66 49.0 4.01e-01 98.1% 43.0%
3505606 376.1.3.1 few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD 0.66 47.0 4.84e-01 94.2% 82.0%
3397204 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.66 57.0 4.56e-01 96.2% 52.0%
3553170 376.1.1.23 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 0.66 47.0 3.60e-01 98.1% 31.5%
3872106 376.1.1.1 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.65 48.0 4.82e-01 98.1% 78.2%
3571832 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.65 48.0 4.81e-01 98.1% 78.2%
3593825 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.65 56.0 4.82e-01 98.1% 65.9%
3376798 376.1.1.1 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.65 49.0 4.73e-01 98.1% 73.3%
3405623 376.1.1.1 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.65 48.0 4.05e-01 98.1% 45.3%
3380774 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.65 45.0 4.37e-01 76.9% 73.0%
3485267 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.65 49.0 4.23e-01 98.1% 51.8%
3253680 376.1.1.23 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 0.65 49.0 4.23e-01 98.1% 51.8%
4940846 376.1.3.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger 0.64 54.0 5.16e-01 90.4% 88.1%
4271737 376.1.1.23 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 0.64 48.0 4.15e-01 98.1% 50.6%
3791823 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.64 47.0 4.60e-01 98.1% 71.7%
3275027 376.1.1.1 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.64 48.0 3.80e-01 98.1% 38.3%
3249904 376.1.1.20 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.64 47.0 4.11e-01 98.1% 52.5%
3254172 73.1.1.1 beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA 0.64 47.0 3.11e-01 98.1% 18.7%
3844071 376.1.1.1 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.63 47.0 4.30e-01 98.1% 58.7%
3550923 376.1.1.23 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 0.63 47.0 3.55e-01 98.1% 31.9%
3557730 376.1.1.23 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 0.63 47.0 3.73e-01 98.1% 37.4%
3480920 376.1.1.23 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 0.63 47.0 3.73e-01 98.1% 37.4%
3396437 376.1.1.23 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 0.63 47.0 4.16e-01 98.1% 53.8%
3256523 376.1.1.8 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › U-box 0.63 47.0 4.24e-01 98.1% 57.3%
3796016 376.1.3.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger 0.63 55.0 5.43e-01 96.2% 96.4%
2755068 376.1.1.12 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING-like 0.63 47.0 4.77e-01 98.1% 86.0%
3829914 376.1.1.23 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 0.63 46.0 4.14e-01 98.1% 53.8%
4011434 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.63 47.0 4.00e-01 98.1% 47.4%
3597386 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.62 46.0 3.70e-01 98.1% 40.0%
3299216 376.1.1.23 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 0.62 47.0 4.08e-01 98.1% 51.1%
4026444 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.62 47.0 4.17e-01 96.2% 55.0%
3168845 376.1.1.66 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_16 0.62 47.0 4.87e-01 98.1% 97.8%
3816489 376.1.1.20 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.62 47.0 4.38e-01 98.1% 64.3%
3927096 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.62 48.0 4.26e-01 98.1% 57.5%
4021522 376.1.1.1 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.62 46.0 4.73e-01 98.1% 88.0%
3243104 376.1.1.22 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 0.62 47.0 4.52e-01 98.1% 73.3%
3833867 376.1.1.1 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.62 47.0 3.96e-01 98.1% 47.4%
3780886 376.1.1.23 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 0.62 46.0 3.57e-01 98.1% 34.4%
3790868 376.1.1.23 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 0.62 46.0 3.62e-01 98.1% 36.7%
3792651 376.1.1.23 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 0.62 48.0 4.23e-01 98.1% 57.5%
4001214 376.1.1.1 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.62 46.0 3.94e-01 98.1% 48.9%
3713646 376.1.1.20 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.62 50.0 4.10e-01 98.1% 51.8%
5050332 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.62 54.0 4.94e-01 100.0% 80.0%
3175755 377.1.1.0 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.61 46.0 4.43e-01 82.7% 88.3%
3848755 376.1.1.66 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_16 0.61 45.0 4.64e-01 98.1% 88.0%
5049661 376.1.2.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain 0.61 46.0 4.76e-01 98.1% 97.8%
3517305 376.1.1.23 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 0.61 45.0 3.84e-01 98.1% 46.3%
3707652 376.1.2.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain 0.61 48.0 4.91e-01 98.1% 92.0%
3701655 376.1.3.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger 0.60 47.0 5.03e-01 88.5% 97.8%
3833930 376.1.2.2 few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 0.60 43.0 4.29e-01 86.5% 72.7%
3690656 376.1.1.15 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-Nse 0.60 49.0 4.07e-01 98.1% 50.0%
3478408 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.60 44.0 3.92e-01 98.1% 53.8%
3851875 376.1.1.23 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 0.60 46.0 4.71e-01 88.5% 98.0%
3327153 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.59 47.0 4.55e-01 92.3% 93.3%
3465532 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.59 46.0 4.25e-01 98.1% 65.7%
3671431 376.1.1.40 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_11 0.59 44.0 4.67e-01 100.0% 95.6%
3414074 376.1.1.1 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.59 43.0 4.36e-01 96.2% 84.0%
3495529 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.58 46.0 4.61e-01 98.1% 90.9%
5049855 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.57 44.0 4.31e-01 98.1% 78.3%
3224677 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.57 43.0 4.22e-01 98.1% 76.7%
3930198 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.56 46.0 4.19e-01 98.1% 80.0%
3452589 376.1.3.1 few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD 0.56 45.0 4.45e-01 92.3% 96.4%
3738682 376.1.3.1 few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD 0.56 45.0 4.65e-01 92.3% 98.0%
3492870 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.55 46.0 4.61e-01 98.1% 100.0%
3785389 376.1.3.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger 0.53 42.0 4.13e-01 90.4% 83.6%
3642366 376.1.3.1 few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD 0.53 43.0 4.17e-01 96.2% 90.0%
None 0.52 43.0 4.15e-01 98.1% 95.0%