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MH356730.1__AWY02948.1__X__00093

Bact-Vir

MH356730.1__AWY02948.1__X__00093

Identity

Accession:
MH356730 ↗
Kingdom:
phage

Quality

86.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Sextaecvirus› Staphylococcus_phage_VB-SauS-SA2

TaxID: 2234082

Cluster

View cluster (20 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 68-188
PDB
Domain cluster: rep: OR521085.1__WNO28334.1__SEA_PSONYX_24__00024__D30-132
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2f0cA02 2.60.40.1830 Mainly Beta › Sandwich › Immunoglobulin-like › Phage tail base-plate Siphoviridae RBP, head domain 0.79 64.0 6.83e-01 100.0% 98.1%
2bseA00 2.60.40.1830 Mainly Beta › Sandwich › Immunoglobulin-like › Phage tail base-plate Siphoviridae RBP, head domain 0.79 64.0 6.76e-01 100.0% 96.3%
4mtmA01 2.60.40.3940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.70 53.0 5.83e-01 97.5% 100.0%
4gklA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.66 46.0 5.29e-01 98.3% 98.9%
4xrtA02 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.58 37.0 3.38e-01 100.0% 48.8%
1qj8A00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.56 46.0 4.33e-01 87.6% 92.6%
1ej8A00 2.60.40.200 Mainly Beta › Sandwich › Immunoglobulin-like › Superoxide dismutase, copper/zinc binding domain 0.55 43.0 4.15e-01 99.2% 72.1%
7x7zA01 2.40.480.10 Mainly Beta › Beta Barrel › AOC barrel-like › Allene oxide cyclase-like 0.55 42.0 4.07e-01 81.8% 77.7%
3o0lA00 2.60.40.3230 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 44.0 4.59e-01 100.0% 99.1%
3aa0B02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.53 43.0 3.96e-01 86.0% 93.5%
4uxuA00 2.70.170.10 Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain 0.52 41.0 3.47e-01 84.3% 60.0%
4d0qA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 42.0 3.91e-01 90.9% 88.2%
3fbqA01 2.60.40.1630 Mainly Beta › Sandwich › Immunoglobulin-like › bacillus anthracis domain 0.50 42.0 3.99e-01 92.6% 87.5%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3588403 5092.1.1.0 ↗ beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins 0.81 66.0 7.19e-01 99.2% 100.0%
961561 5092.1.1.4 ↗ beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins › Caudo_bapla_RBP 0.80 64.0 6.86e-01 100.0% 98.1%
1156585 5092.1.1.4 ↗ beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins › Caudo_bapla_RBP 0.78 64.0 6.60e-01 100.0% 92.0%
3011458 12.1.1.25 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Fucosidase_C 0.63 46.0 5.05e-01 92.6% 95.8%
4827722 9.13.1.5 ↗ beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › AOC_like 0.54 38.0 4.34e-01 74.4% 100.0%
3624236 11.12.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD 0.53 42.0 3.46e-01 86.0% 95.7%
3705816 897.1.1.1 ↗ a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 › MAM33 0.53 38.0 3.12e-01 74.4% 71.6%
3491574 11.1.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin 0.51 39.0 3.99e-01 99.2% 83.3%