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MH363700.1__AWY10104.1__X__00007
Bact-VirMH363700.1__AWY10104.1__X__00007
Identity
- Accession:
- MH363700 ↗
- Kingdom:
- phage
Quality
77.7
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Ackermannviridae›
Vapseptimavirus›
Vibrio_phage_VP-1
TaxID: 2234088
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-87
Domain cluster:
rep: NC_052660.1__YP_009986652.1__JR325_gp173__00276__D78-150
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3a1jB00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.62 | 51.0 | 3.59e-01 | 96.5% | 28.6% |
| 6j8yA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.60 | 53.0 | 3.76e-01 | 97.7% | 32.7% |
| 2avtA02 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.59 | 46.0 | 3.57e-01 | 96.5% | 36.7% |
| 8dqwG01 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.57 | 49.0 | 3.94e-01 | 97.7% | 72.0% |
| 2p5zX01 | 2.30.110.50 | Mainly Beta › Roll › Pnp Oxidase; Chain A › | 0.53 | 32.0 | 2.68e-01 | 100.0% | 31.3% |
| 2o5nA02 | 3.30.500.30 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › | 0.52 | 39.0 | 3.35e-01 | 84.9% | 82.8% |
| 2c9jA00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.51 | 45.0 | 3.43e-01 | 100.0% | 69.5% |
| 1srqA01 | 3.30.1120.160 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.51 | 40.0 | 3.46e-01 | 86.0% | 68.1% |
| 4dkmA00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.51 | 44.0 | 3.37e-01 | 100.0% | 71.4% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3787700 | 227.1.1.11 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 | 0.62 | 53.0 | 4.39e-01 | 95.3% | 71.6% |
| 3788671 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.60 | 52.0 | 4.20e-01 | 95.3% | 83.6% |
| 3558235 | 227.1.1.11 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 | 0.59 | 51.0 | 4.45e-01 | 96.5% | 64.4% |
| 3743106 | 227.1.1.11 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 | 0.59 | 51.0 | 4.33e-01 | 96.5% | 64.8% |
| 3256903 | 227.1.1.12 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 | 0.59 | 51.0 | 4.44e-01 | 97.7% | 63.0% |
| 3478160 | 227.1.1.12 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 | 0.58 | 51.0 | 4.50e-01 | 97.7% | 65.6% |
| 3744268 | 227.1.1.12 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 | 0.58 | 51.0 | 4.38e-01 | 96.5% | 64.4% |
| 3574882 | 227.1.1.12 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 | 0.58 | 51.0 | 4.35e-01 | 97.7% | 62.3% |
| 4463778 | 227.1.1.7 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 | 0.58 | 51.0 | 4.56e-01 | 97.7% | 84.2% |
| 3412152 | 227.1.1.12 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 | 0.58 | 49.0 | 4.26e-01 | 95.3% | 61.5% |
| 3798355 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.58 | 50.0 | 4.29e-01 | 97.7% | 61.4% |
| 3625037 | 227.1.1.11 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 | 0.57 | 50.0 | 4.33e-01 | 97.7% | 65.2% |
| 2834343 | 227.1.1.12 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 | 0.57 | 49.0 | 3.91e-01 | 97.7% | 69.2% |
| 3719897 | 227.1.1.18 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DUF7881_C | 0.56 | 49.0 | 4.35e-01 | 97.7% | 92.8% |
| 4217174 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.54 | 29.0 | 3.17e-01 | 100.0% | 61.4% |
| 4207610 | 274.1.1.13 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › GspH | 0.53 | 41.0 | 3.55e-01 | 87.2% | 88.0% |
| 3591829 | 75.1.1.1 ↗ | beta barrels › Cyclophilin-like › Cyclophilin-like › Cyclophilin-like › Pro_isomerase | 0.53 | 45.0 | 3.78e-01 | 100.0% | 91.9% |
| 3394711 | 4026.1.1.1 ↗ | a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › Rap-GAP_dimer | 0.52 | 41.0 | 3.36e-01 | 84.9% | 60.6% |
| 3562593 | 4026.1.1.1 ↗ | a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › Rap-GAP_dimer | 0.51 | 40.0 | 3.32e-01 | 86.0% | 70.6% |
| 3935844 | 5.1.3.204 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF7911 | 0.50 | 40.0 | 2.74e-01 | 87.2% | 89.5% |
| None | — | 0.50 | 39.0 | 3.02e-01 | 86.0% | 94.7% |