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MH363708.1__AXC34316.1__1302_0006__00006

Bact-Vir

MH363708.1__AXC34316.1__1302_0006__00006

Identity

Accession:
MH363708 ↗
Kingdom:
phage

Quality

70.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 18-81
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2hdwA02 1.10.10.800 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.59 47.0 4.28e-01 90.6% 76.9%
5yrzA01 3.30.160.250 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.59 43.0 3.60e-01 75.0% 67.6%
1ailA00 1.10.287.10 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding 0.56 42.0 4.11e-01 81.2% 75.7%
2uy1A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.56 42.0 2.54e-01 79.7% 57.3%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3735647 4291.1.1.1 beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP 0.59 49.0 3.02e-01 92.2% 90.2%
5009403 7584.1.1.1 a/b three-layered sandwiches › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › AMP-binding 0.53 43.0 2.96e-01 89.1% 53.5%
2067972 3874.1.1.1 extended segments › Agnoprotein › Agnoprotein › Agnoprotein › Polyoma_agno 0.52 35.0 3.39e-01 92.2% 62.0%
D2 high residues 93-142
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2q7dA02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.60 46.0 3.15e-01 88.0% 85.5%
1svdM00 3.30.190.10 Alpha Beta › 2-Layer Sandwich › Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase › Ribulose bisphosphate carboxylase, small subunit 0.59 48.0 3.95e-01 100.0% 50.0%
1vwxS02 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.59 48.0 4.37e-01 100.0% 71.1%
4gp3A03 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.58 46.0 3.70e-01 100.0% 95.9%
3oq2A00 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 46.0 3.86e-01 100.0% 74.7%
1qppA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 48.0 3.74e-01 100.0% 50.9%
3vwdA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.55 46.0 3.18e-01 100.0% 53.6%
2hf6A00 3.30.450.60 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.55 41.0 3.04e-01 84.0% 65.8%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3574369 331.9.1.0 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain 0.59 45.0 3.13e-01 88.0% 67.9%
5018703 815.1.1.0 a+b two layers › Chromosomal protein MC1 › Chromosomal protein MC1 › Chromosomal protein MC1 0.56 45.0 3.92e-01 100.0% 63.3%
4373835 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.53 36.0 2.43e-01 72.0% 83.3%
3366122 12.1.1.48 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Laman-like_dom 0.50 43.0 3.11e-01 100.0% 44.0%
D3 high residues 149-228
PDB