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MH382836.1__AXC36492.1__phCDa_48__00048
Bact-VirMH382836.1__AXC36492.1__phCDa_48__00048
Identity
- Accession:
- MH382836 ↗
- Kingdom:
- phage
Quality
72.9
mean pLDDT
Taxonomy
TaxID: 2268587
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-71
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2jveA00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.81 | 54.0 | 5.44e-01 | 95.7% | 67.6% |
| 3c1yA01 | 3.40.1700.10 | Alpha Beta › 3-Layer(aba) Sandwich › YojJ-like (1 › DNA integrity scanning protein, DisA, N-terminal domain | 0.68 | 51.0 | 4.15e-01 | 81.4% | 78.3% |
| 2fb5A02 | 3.40.1700.10 | Alpha Beta › 3-Layer(aba) Sandwich › YojJ-like (1 › DNA integrity scanning protein, DisA, N-terminal domain | 0.68 | 52.0 | 4.31e-01 | 84.3% | 85.6% |
| 3krbA00 | 3.20.20.100 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain | 0.61 | 50.0 | 3.32e-01 | 91.4% | 56.4% |
| 7c2fB01 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.61 | 50.0 | 4.71e-01 | 95.7% | 73.3% |
| 1xmxA01 | 3.40.50.10770 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Hypothetical protein VC1899 like domain (Restriction endonuclease-like) | 0.59 | 43.0 | 3.50e-01 | 80.0% | 96.5% |
| 2g5fB00 | 3.60.120.10 | Alpha Beta › 4-Layer Sandwich › Anthranilate synthase › Anthranilate synthase | 0.58 | 42.0 | 2.64e-01 | 78.6% | 86.7% |
| 6jhpA01 | 2.70.98.60 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis | 0.57 | 46.0 | 3.08e-01 | 91.4% | 39.1% |
| 4iajA00 | 3.30.1490.390 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Protein of unknown function DUF4649 | 0.57 | 41.0 | 4.04e-01 | 78.6% | 82.9% |
| 3v67A01 | 3.30.450.210 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Two-component sensor protein CpxA, periplasmic domain | 0.56 | 40.0 | 3.49e-01 | 80.0% | 76.0% |
| 1wh2A01 | 3.30.1490.40 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › GYF domain | 0.55 | 38.0 | 3.95e-01 | 77.1% | 82.0% |
| 2fn0B00 | 3.60.120.10 | Alpha Beta › 4-Layer Sandwich › Anthranilate synthase › Anthranilate synthase | 0.55 | 43.0 | 2.68e-01 | 85.7% | 37.1% |
| 1lktA00 | 2.170.14.10 | Mainly Beta › Beta Complex › Tailspike Protein; Chain › Phage P22 tailspike-like, N-terminal domain | 0.54 | 38.0 | 3.43e-01 | 75.7% | 77.9% |
| 3ajvC02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.54 | 38.0 | 3.55e-01 | 75.7% | 92.3% |
| 2eo6A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.53 | 42.0 | 3.74e-01 | 90.0% | 78.7% |
| 4ccjA01 | 2.60.120.650 | Mainly Beta › Sandwich › Jelly Rolls › Cupin | 0.53 | 44.0 | 3.17e-01 | 100.0% | 47.2% |
| 4jpdA00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.53 | 43.0 | 3.76e-01 | 91.4% | 90.8% |
| 7npaA02 | 3.30.70.3340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 42.0 | 3.98e-01 | 87.1% | 83.5% |
| 4chmB00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 39.0 | 3.31e-01 | 82.9% | 85.5% |
| 1u7bA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.52 | 37.0 | 2.52e-01 | 75.7% | 46.6% |
| 3l2hA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 39.0 | 3.11e-01 | 82.9% | 59.9% |
| 1lbvA01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.51 | 35.0 | 2.88e-01 | 72.9% | 99.3% |
| 2f9zC00 | 3.30.1330.200 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › | 0.51 | 41.0 | 3.40e-01 | 100.0% | 81.2% |
| 3pweA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.50 | 38.0 | 3.21e-01 | 82.9% | 89.4% |
| 7dpyB01 | 2.40.128.200 | Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor | 0.50 | 36.0 | 3.53e-01 | 84.3% | 68.7% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3801134 | 3257.1.1.0 ↗ | a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain | 0.68 | 45.0 | 3.29e-01 | 95.7% | 26.7% |
| 2793306 | 4279.1.1.1 ↗ | a+b three layers › DisA nucleotide-binding domain › DisA nucleotide-binding domain › DisA nucleotide-binding domain › DAC | 0.68 | 54.0 | 4.21e-01 | 88.6% | 75.9% |
| 3958560 | 4279.1.1.1 ↗ | a+b three layers › DisA nucleotide-binding domain › DisA nucleotide-binding domain › DisA nucleotide-binding domain › DAC | 0.64 | 48.0 | 4.52e-01 | 81.4% | 82.4% |
| 3709028 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.61 | 40.0 | 2.78e-01 | 95.7% | 19.7% |
| 3244743 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.58 | 38.0 | 2.96e-01 | 95.7% | 30.0% |
| 5079980 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.58 | 48.0 | 3.58e-01 | 92.9% | 55.3% |
| 4990696 | 2003.1.1.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GFO_IDH_MocA | 0.58 | 44.0 | 2.88e-01 | 81.4% | 86.0% |
| 4958290 | 2003.1.1.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GFO_IDH_MocA | 0.58 | 43.0 | 2.83e-01 | 80.0% | 87.0% |
| 3515019 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.58 | 39.0 | 2.58e-01 | 92.9% | 16.7% |
| 4020699 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.57 | 46.0 | 2.91e-01 | 90.0% | 59.9% |
| 3643227 | 220.1.1.36 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_12 | 0.57 | 41.0 | 3.20e-01 | 77.1% | 50.7% |
| 4028811 | 10.13.1.0 ↗ | beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A | 0.55 | 40.0 | 3.43e-01 | 78.6% | 90.4% |
| 5074437 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.55 | 37.0 | 3.23e-01 | 70.0% | 64.8% |
| 3711230 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.54 | 37.0 | 3.03e-01 | 82.9% | 36.3% |
| 5006277 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.54 | 29.0 | 3.27e-01 | 77.1% | 67.3% |
| 4143716 | 241.2.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay | 0.54 | 44.0 | 3.86e-01 | 92.9% | 91.8% |
| 3937848 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.54 | 42.0 | 3.12e-01 | 88.6% | 71.3% |
| 3707796 | 9.4.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains | 0.54 | 41.0 | 3.66e-01 | 85.7% | 98.1% |
| 3970136 | 241.2.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like | 0.53 | 43.0 | 3.79e-01 | 88.6% | 75.2% |
| 3405941 | 4184.1.1.1 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › DM9 | 0.53 | 39.0 | 3.98e-01 | 78.6% | 79.4% |
| 4313104 | 241.2.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay | 0.53 | 42.0 | 3.71e-01 | 87.1% | 74.0% |
| 4218376 | 241.2.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay | 0.53 | 41.0 | 3.73e-01 | 87.1% | 76.0% |
| 4336238 | 241.2.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay | 0.53 | 41.0 | 3.74e-01 | 87.1% | 81.0% |
| 4269649 | 241.2.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay | 0.53 | 43.0 | 3.79e-01 | 92.9% | 90.0% |
| 3245311 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.52 | 39.0 | 3.54e-01 | 84.3% | 87.6% |
| 5003472 | 298.1.1.24 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 | 0.52 | 38.0 | 3.07e-01 | 77.1% | 88.9% |
| 4026536 | 220.1.1.53 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › ISP1_C | 0.52 | 39.0 | 3.29e-01 | 81.4% | 83.9% |
| 4934604 | 2003.1.1.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GFO_IDH_MocA | 0.52 | 42.0 | 2.77e-01 | 90.0% | 83.8% |
| 5004274 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.51 | 42.0 | 4.18e-01 | 95.7% | 85.3% |
| 4079506 | 288.1.1.2 ↗ | a+b four layers › CNF1/YfiH-like putative cysteine hydrolases › CNF1/YfiH-like putative cysteine hydrolases › CNF1/YfiH-like putative cysteine hydrolases › CheD | 0.51 | 43.0 | 3.45e-01 | 100.0% | 79.7% |
| 4479376 | 241.2.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay | 0.51 | 42.0 | 3.60e-01 | 91.4% | 85.2% |
| 3233815 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.51 | 41.0 | 2.86e-01 | 91.4% | 33.9% |
| 4023915 | 220.1.1.53 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › ISP1_C | 0.51 | 38.0 | 3.30e-01 | 81.4% | 93.9% |
| 3965099 | 241.2.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay | 0.51 | 42.0 | 3.70e-01 | 92.9% | 90.5% |
| 4515677 | 241.2.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay | 0.51 | 43.0 | 3.73e-01 | 98.6% | 92.1% |
| 1298746 | 10.1.1.45 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Bact_lectin | 0.51 | 39.0 | 2.79e-01 | 87.1% | 62.6% |
| 3856901 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.51 | 38.0 | 2.53e-01 | 85.7% | 64.3% |
| 3247669 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.50 | 40.0 | 2.81e-01 | 90.0% | 43.6% |