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MH382836.1__AXC36501.1__phCDa_57__00057
Bact-VirMH382836.1__AXC36501.1__phCDa_57__00057
Identity
- Accession:
- MH382836 ↗
- Kingdom:
- phage
Quality
67.7
mean pLDDT
Taxonomy
TaxID: 2268587
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 43-104
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ygyB03 | 3.30.1330.90 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › D-3-phosphoglycerate dehydrogenase; domain 3 | 0.55 | 44.0 | 3.32e-01 | 85.5% | 60.4% |
| 7z7vC01 | 3.30.460.80 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit | 0.55 | 47.0 | 3.81e-01 | 100.0% | 62.2% |
| 2ja9A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 44.0 | 4.06e-01 | 95.2% | 100.0% |
| 8b4hA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.52 | 45.0 | 3.30e-01 | 95.2% | 43.8% |
| 3mcrA00 | 3.30.460.80 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit | 0.50 | 44.0 | 3.36e-01 | 100.0% | 48.7% |
| 7arcC01 | 3.30.460.80 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit | 0.50 | 44.0 | 3.48e-01 | 100.0% | 52.6% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5030508 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.69 | 55.0 | 3.96e-01 | 88.7% | 79.5% |
| 3832696 | 1.1.11.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › PF31239 | 0.64 | 54.0 | 4.50e-01 | 96.8% | 98.2% |
| 3813512 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.62 | 52.0 | 4.41e-01 | 96.8% | 97.3% |
| 3716895 | 3698.1.1.0 ↗ | beta sandwiches › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain | 0.60 | 48.0 | 3.43e-01 | 87.1% | 49.5% |
| 4012884 | 7525.1.1.0 ↗ | a/b three-layered sandwiches › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like | 0.60 | 50.0 | 3.55e-01 | 98.4% | 96.7% |
| 1095153 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.53 | 40.0 | 2.53e-01 | 85.5% | 38.3% |
| 3682265 | 6165.1.1.1 ↗ | beta sandwiches › Piezo CTL2 domain › Piezo CTL2 domain › Piezo CTL2 domain › Piezo_RRas_bdg | 0.53 | 45.0 | 3.16e-01 | 98.4% | 87.1% |